Forked from INRIA forge for conda recipes on atgc channel

Bioinformatic tool to measure the Unused Index of each Splice Site from RNA-seq

my solution on Rosalind

Parallel Windowed Adaptive Trimming for fastq files using quality

R package for RNA-Seq quantification

A tool to process bam/sam files

In silico research group's bioinformatics toolbox for network and machine learning analysis

Data processing pipeline for extracellular small RNA-seq from human specimen

CLARK: Fast, accurate and versatile sequence classification system

Super ultra-fast fastq preprocessor, using parallel windowed adaptive trimming.

(NOTE: This is a development fork, please refer to official repo at statgen: https://github.com/statgen/popscle) Freemuxlet methods and auxilary tools

Regulatory networks with Direct Information

bamcc — split SAM/BAM files into connected components

An assembler for circular RNAs

Assembler for multiple RNA-seq samples

rnabridge-align is an efficient tool to bridge paired-end RNA-seq reads

K-mer indexing and querying in RNA-Seq data

A sensitive and fast tool for circular RNA detection from RNA-Seq data

A tool for de novo clustering of long transcriptomic reads