An individual based model for larval cod

Source code of the model used in Cornejo-Donoso, J., Einarsson, B., Birnir, B., Gaines, S.D. (2017) Effects of fish movement assumptions on the design of a marine protected area to protect an overfished stock. PlosONE 12(10): e.0186309 https://doi.org/10.1371/journal.pone.0186309

Taskview for all IBM related 📦 packages in the R universe

Python package for implementing individual-based forest models

Individual-based model for assessing the effects by-catch, ship noise etc. on harbour porpoises in the inner Danish waters

How does disturbance on a landscape affect the establishment of new polyploid plant species?

Covid Epidemics Simulation with Simpy

Python individual-level SIRD model for studying vaccination prioritization

Supplementary material for "Identifying density-dependent interactions in collective cell behaviour"

System to simulate individual interactions and capture ecological and evolutionary dynamics

Fitting a stochastic individual based model for arboviral disease.

A spatially explicit individual-based model for fish early life histories

Repository for developing sediment module for OpenDrift for modeling flow of particles in Glomma

Individual-based model of a theoretical reintroduction of wild boars in France

Scripts and Data underlying the 2017 Ecological Modelling paper on UVAFME-VOC.

Individual-based metapopulation model of devil facial tumour disease.

Individual based-model to determine which management option (buffers or corridors between ponds) is better for promoting the population of newts.

Multiscale Modelling Tool - mathematical modelling without the maths

Complete source code and intermediary files to accompany the manuscript published in PLOS Global Public Health.

HostSwitch: An R Package to simulate host switching by a parasite