Motion capture (markerless 3D pose estimation) pipeline and helper GUI for tethered Drosophila.
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Updated
Oct 28, 2024 - Jupyter Notebook
Motion capture (markerless 3D pose estimation) pipeline and helper GUI for tethered Drosophila.
A neuromechanical model of adult Drosophila melanogaster.
Tracking, classification, and analysis tools for courtship in the fly.
Toolkit for trajectory data processing, network construction and analysis
Sequential inverse kinematics pipeline.
Tutorial for RNA sequence data processing and simple downstream analysis with Drosophila melanogaster
Repository for RDN-WDP paper
Python and R pipeline to predict sgRNA efficiency in D.mel via machine learning algorithms trained and optimized on CRIPSR pooled gene essentiality screens
Original data and analysis code for Carreira-Rosario et al. "Mechanosensory input during circuit formation shapes Drosophila motor behavior through Patterned Spontaneous Network Activity", Current Biology 2021.
Data package for Drosophila melanogaster RNA-seq
Analysis of clock neurons in Hemibrain data
Custom codes for Flysta3D paper.
Packaged and versioned Analysis functions for Shahar's cells
Drosophila melanogaster IndSeq and PoolSeq genomics data in Asia and Europe
Implementation of the T4 model for motion detection from Zavatone-Veth et al., 2020
Data package containing transcriptomic profiles of IRBIT mutant fruit flies
To map Drosophila melanogaster gene region(s) containing resistance to infection by parasitic wasp Leptopilina boulardi.
This repo contains code implementation from paper "Automated identification of social interaction criteria in Drosophila melanogaster"
Shiny app for screening for core promoter occurrences close to expressed transposons TSSs.
Inversion status and de novo assembly of Drosophila melanogaster
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