8000 Running the hmmsearch · Issue #79 · althonos/pyhmmer · GitHub
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Running the hmmsearch #79
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@SergeyBaikal

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@SergeyBaikal

Dear authors, I find it difficult to run the program without knowing python. How can I run a similar command with the pyhmmer and extract only the best bit score? Could you please help me?

hmmsearch --tblout /home/Results_vog.txt -E 1e-5 --notextw --cpu 8 /home/Vog_219.hmm /home/proteins.fasta

Results_vog.txt > one_target_best_bit_score.tsv

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