8000 DCBIA-OrthoLab repositories · GitHub

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DCBIA-OrthoLab

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39 repositories

MedEx
Public
MedEx is a repository dedicated to implementing Large Language Models (LLMs) to extract temporomandibular joint (TMJ)-related comorbidities from unstructured clinical text. It generates an automated, structured summary for each patient and provides an interactive visual dashboard to explore cohort-level statistics
Python
•0•0•0•0•Updated Apr 30, 2025Apr 30, 2025
SlicerAutomatedDentalTools
Public
A 3D Slicer extension to use AMASSS, ALI-CBCT and ALI-IOS
machine-learning deep-learning pytorch segmentation orthodontics 3d-models 3d-slicer-extension 3d-images landmark-localization monai
Python
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Other
•28•100•10•2•Updated Apr 30, 2025Apr 30, 2025
SlicerDentalModelSeg
Public
This extension aims to provide a GUI for a deep-learning automated teeth segmentation tool that we developed at the University of North Carolina in Chapel Hill in collaboration with the University of Michigan in Ann Arbor.
3d-slicer-extension
Python
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Apache License 2.0
•14•56•3•0•Updated Apr 30, 2025Apr 30, 2025
ShapeAXI
Public
Shape Analysis Explainability And Interpretability
Python
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Apache License 2.0
•5•5•1•0•Updated Apr 22, 2025Apr 22, 2025
CLIC
Public
CLIC (CLassification of Impacted Canines), an artificial intelligence (AI)-driven tool leveraging Mask R-CNN (Mask Region-based Convolutional Neural Network)
Python
•0•0•0•0•Updated Apr 15, 2025Apr 15, 2025
Fly-by-CNN
Public
Acquire features from a 3D object using a ray-cast approach.
Jupyter Notebook
•15•19•0•0•Updated Mar 31, 2025Mar 31, 2025
MFSDA_Python
Public
Multivariate Functional Shape Data Analysis in Python (MFSDA_Python) is a Python based package for statistical shape analysis. A multivariate varying coefficient model is introduced to build the association between the multivariate shape measurements and demographic information and other clinical, biological variables. Statistical inference, i.e…
3d-slicer-extension
Python
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Apache License 2.0
•13•3•8•0•Updated Mar 10, 2025Mar 10, 2025
VolumeAXI
Public
Interpretable Convolutional Neural Network with Grad-CAM.
Python
•0•0•0•0•Updated Aug 5, 2024Aug 5, 2024
SlicerConda
Public
The "Conda Path Manager" for Slicer simplifies Miniconda integration by managing installation paths and providing tools for executing Conda commands.
conda wsl 3d-slicer-extension miniconda-environments miniconda3
Python
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Apache License 2.0
•2•1•3•1•Updated Jul 30, 2024Jul 30, 2024
ShapeVariationAnalyzer
Public
Shape modeling and classification, extract shape features
shape model classification principal-component-analysis 3d-slicer-extension slicercmf deep-learning
Python
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Apache License 2.0
•22•8•5•2•Updated Apr 23, 2024Apr 23, 2024
Q3DCExtension
Public
3d-slicer-extension slicercmf
Python
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Apache License 2.0
•14•4•6•1•Updated Apr 23, 2024Apr 23, 2024
PickAndPaintExtension
Public
3d-slicer-extension slicercmf
Python
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Apache License 2.0
•6•3•5•0•Updated Apr 23, 2024Apr 23, 2024
MeshStatisticsExtension
Public
3d-slicer-extension slicercmf
Python
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Apache License 2.0
•6•2•0•0•Updated Apr 23, 2024Apr 23, 2024
AnglePlanes-Extension
Public
3d-slicer-extension slicercmf
Python
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Apache License 2.0
•11•1•3•0•Updated Apr 23, 2024Apr 23, 2024
EasyClip-Extension
Public
3d-slicer-extension slicercmf
Python
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Apache License 2.0
•7•4•2•0•Updated Apr 23, 2024Apr 23, 2024
CMFreg
Public
Cranio-Maxillofacial registration
3d-slicer-extension slicercmf
Python
•11•11•1•1•Updated Apr 23, 2024Apr 23, 2024
DatabaseInteractorExtension
Public
3d-slicer-extension slicercmf
Python
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Apache License 2.0
•5•0•0•0•Updated Apr 23, 2024Apr 23, 2024
AMASSS_CBCT
Public
Automatic segmentation of CBCT scans with a 3D Unet
Python
•10•1•0•0•Updated Apr 5, 2024Apr 5, 2024
Smart-DOC
Public
JavaScript
•5•4•5•23•Updated Oct 3, 2023Oct 3, 2023
Cl3ft
Public
Cleft analysis tools
Python
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Apache License 2.0
•0•0•1•0•Updated Mar 18, 2023Mar 18, 2023
TMJSeg
Public
Temporomandibular joint segmentation algorithm for computed tomography images
segmentation temporomandibular-joint matlab
MATLAB
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Apache License 2.0
•0•1•0•0•Updated Feb 22, 2023Feb 22, 2023
TMJ-OAI
Public
Scripts for OAI project
R
•4•0•0•0•Updated Feb 22, 2023Feb 22, 2023
TMJOA_Longitudinal
Public
EHPN modeling for longitudinal prediction of temporomandibular joint osteoarthritis
R
•3•0•0•0•Updated Feb 10, 2023Feb 10, 2023
SlicerBatchAnonymize
Public
Slicer extension to anonymize a batch of DICOM images.
Python
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Apache License 2.0
•5•0•0•0•Updated Feb 3, 2023Feb 3, 2023
ASO
Public
Automatic standardized orientation
Python
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Apache License 2.0
•2•0•0•0•Updated Dec 1, 2022Dec 1, 2022
3DTeethSeg22_challenge
Public
Dental model seg challenge docker repository build
Python
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Apache License 2.0
•0•16•1•0•Updated Sep 14, 2022Sep 14, 2022
ALI_CBCT
Public
Automatic landmark identification in CBCT scans
Python
•4•3•0•0•Updated Jul 29, 2022Jul 29, 2022
ALI_IOS
Public
Automatic Landmark Identification in Intra Oral scans
segmentation landmark-detection multiview 3dmodel shapeanalysis
Python
•4•2•2•0•Updated Jul 19, 2022Jul 19, 2022
SlicerCMF
Public
SlicerCMF is the dissemination vehicle of powerful dental image analysis methodology based on 3D Slicer open-source software. SlicerCMF supports patient-specific decision making and assessment of the disease progression via registration of serial images. http://cmf.slicer.org/
3d-slicer-extension slicercmf
HTML
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Other
•1•8•4•0•Updated May 16, 2022May 16, 2022
TMJPI
Public
Dockerfile
•2•0•0•0•Updated Apr 19, 2022Apr 19, 2022

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