8000 error when importing dcterms · Issue #1075 · ontodev/robot · GitHub
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error when importing dcterms #1075

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wdduncan opened this issue Nov 19, 2022 · 3 comments
Open

error when importing dcterms #1075

wdduncan opened this issue Nov 19, 2022 · 3 comments

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@wdduncan
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This issue is a follow up to INCATools/ontology-development-kit#614.

Suppose, you have an ODK file named foo-odk.yaml that references the dcterms library as an import group. E.g.:

import_group:
  products:
  - id: dcterms
      mirror_from: http://protege.stanford.edu/plugins/owl/dc/terms.owl

When you run seed-via-docker.sh -C configs/foo-odk.yaml you get the error:

ERROR OWLOntologyManagerImpl.checkForOntologyIDChange() new:Ontology(OntologyID(Anonymous-15)) [Axioms: 0 Logical Axioms: 0] First 20 axioms: {}
Could not load imported ontology: <http://protege.stanford.edu/plugins/owl/dc/terms.owl> Cause: Ontology already exists. OntologyID(OntologyIRI(<http://purl.org/dc/terms/>) VersionIRI(<null>))

@matentzn determined that the error has something to do with robot, and gave a work around. But, you may want to look into it.

This is how you can reproduce the error:

echo "INSERT DATA { <A> <B> <C> }" > q.sparql 
robot query -I http://protege.stanford.edu/plugins/owl/dc/terms.owl --update q.sparql merge -o tmp/test.ofn
@matentzn
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Just to be clear, the error has nothing to do with ODK and is purely a consequence of chaining query --update with any other robot step, like merge. This does not happen with any other ontology I know of.

@ddooley
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ddooley commented Mar 9, 2023 •
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Not sure if this is related, but I try to add Prefix(dcterms:=http://purl.org/dc/terms/) to my foodon-edit.ofn file via protege, and that's fine, it saves and uses that prefix for all dc references.
But the moment I use robot (and OWLAPI presumably) to add a dc:date to foodon-edit.ofn and resave, the dcterms prefix gets toasted and all dc terms get full URI in the file.

@matentzn
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matentzn commented Mar 9, 2023

@ddooley i think your problem is more #1101

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@wdduncan @ddooley @matentzn
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