8000 ataqv · Issue #411 · nf-core/atacseq · GitHub
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ataqv #411

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arugula2388 opened this issue Feb 10, 2025 · 2 comments
Open

ataqv #411

arugula2388 opened this issue Feb 10, 2025 · 2 comments
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@arugula2388
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Can you explain how does ataqv compute the TSS Enrichmentscore ?
It seems to be different than what ENCODE recommends
@arugula2388
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specifically the output within

/bwa/merged_library/ataqv/broad_peak/*.ataqv.json

@JoseEspinosa JoseEspinosa added the question Further information is requested label Mar 11, 2025
@JoseEspinosa
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Here is the code that runs ataqv.

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