8000 Commits · AllenWLynch/MIRA · GitHub

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Commits

Commits on Apr 25, 2024

Commits on Feb 12, 2024

bump version 2.1.1 official, bug fixes to train_test_split, made dependencies work on python>3.9 and MAC arm64 os, bug fixes to Bayesian tuner, updated website dependency versions
AllenWLynch
committed
updated sphinx requirements
AllenWLynch
committed
changed installation instructions to use pip
AllenWLynch
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Commits on Feb 11, 2024

updated dependencies in setup.cfg, bumped version to 2.1.1.a6
AllenWLynch
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fixed bug in parallelization for Bayesian tuner, added pytorch<=2 dependency
AllenWLynch
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fixed problem where train_test_split was not working
AllenWLynch
committed

Commits on Feb 3, 2024

changed OneHotEncoder to sparse_output to reflect sklearn API change
AllenWLynch
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Commits on Sep 16, 2023

changed Bayesian tuner to just use a for-loop when working on only one core
AllenWLynch
committed

Commits on Sep 11, 2023

Commits on Sep 9, 2023

changed moods version so that MIRA is installable on python3.10+ systems
AllenWLynch
committed

Commits on Aug 29, 2023

Changed version requirements for pytorch, added upper python limit for version 3.11 until MOODS enables updates to newer python version.
AllenWLynch
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Commits on Jul 31, 2023

Added conda install information to README, getting started page, and landing page for website
Allen Lynch
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Commits on Jul 13, 2023

Commits on Jul 12, 2023

Commits on Jun 30, 2023

made the SVD model persistent so that it is not recalculated each time the weights are reinitialized, added warning that DAN models cannot be used on GPU, kept DAN model as default
Allen Lynch
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Commits on Jun 29, 2023

added faster encoder for ATAC-seq model
Allen Lynch
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Commits on Jun 28, 2023

added max_topics option to gradient tuner
Allen Lynch
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Commits on Jun 23, 2023

Commits on Jun 22, 2023

added gradient tuner
Allen Lynch
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changed how deviance residuals work
Allen Lynch
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Commits on Jun 21, 2023

made API change for get_umap_features
Allen Lynch
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Commits on Jun 20, 2023

added gradient-based tuner based on the dirichlet process model
Allen Lynch
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Commits on May 26, 2023

added CODAL image to homepage and changed another paper link
Allen Lynch
committed

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