8000 Commits · MachineLearningLifeScience/corel · GitHub

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Commits

Commits on Apr 12, 2024

Commits on Feb 5, 2024

added experiment configs, more seeds
Richard Michael
committed
seed filtered viz update, lambo rel.HV included
Richard Michael
committed

Commits on Feb 1, 2024

update font-sizes, labels
Richard Michael
committed
optimization visualization update, labels, fontsizes
Richard Michael
committed
visualize all GFP points
Richard Michael
committed

Commits on Jan 31, 2024

added pareto start, GFP linefigures
Richard Michael
committed
latent figure adjustment, square box
Richard Michael
committed
exclude model dir from merging.
Richard Michael
committed
Fig. optimization line-plots, pareto front, across all metrics
Richard Michael
committed

Commits on Jan 30, 2024

slurm add gpu resources
Richard Michael
committed
SLUM batch add gpu resources
Richard Michael
committed
lambo runs require lambo location
Richard Michael
committed
compute init expected values on observed sequences, fix param reassign
Richard Michael
committed
speeds up optimization
SimonBartels
committed
solves problem with instable hyper-parameters
SimonBartels
committed

Commits on Jan 29, 2024

solves numerical problem of unstable diagonal
SimonBartels
committed
GFP update experimental setup SLURM N=50 B=16; N=16 B=16; N=3 B=3
Richard Michael
committed
LVM fix add parameter prior to optimization criterion, log_prior_density
Richard Michael
committed
GFP experiment fix, number of starting sequences is parameter, allow n=1
Richard Michael
committed

Commits on Jan 28, 2024

figure update kernel, latent visualization
Richard Michael
committed
figure update 1D visualization
Richard Michael
committed
add seeds to experiment module
Richard Michael
committed
RFP added three seeds to SLURM experiment configs
Richard Michael
committed
lvmmodel hotfix transpose in solve
Richard Michael
committed
Merge branch '26-lvmmodel-extreme-values-amplitude-and-trainable-parameters' into 'master'
Richard Michael
committed
Resolve "lvmmodel extreme values amplitude and trainable parameters"
Richard Michael
committed

Commits on Jan 25, 2024

lambo optimizer set trials to default 16
Richard Michael
committed
observer: add unnormalized HV computation, logging
Richard Michael
committed
refactor kernel visualization, functions for kernel eval, two refs
Richard Michael
committed
add training labels getter for CBas weighting
Richard Michael
committed
refactor kernel values computation not in visualization script
Richard Michael
committed
correct latent visualization reference values
Richard Michael
committed

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