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Approximating Anatomical Brain Connectivity with Diffusion Tensor MRI Using Kernel-Based Diffusion Simulations

  • Conference paper
Information Processing in Medical Imaging (IPMI 2005)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 3565))

Abstract

We present a new technique for noninvasively tracing brain white matter fiber tracts using diffusion tensor magnetic resonance imaging (DT-MRI). This technique is based on performing diffusion simulations over a series of overlapping three dimensional diffusion kernels that cover only a small portion of the human brain volume and are geometrically centered upon selected starting voxels where a seed is placed. Synthetic and real DT-MRI data are employed to demonstrate the tracking scheme. It is shown that the synthetic tracts can be accurately replicated, while several major white matter fiber pathways in the human brain can be reproduced noninvasively as well. The primary advantages of the algorithm lie in the handling of fiber branching and crossing and its seamless adaptation to the platform established by new imaging techniques, such as high angular, q-space, or generalized diffusion tensor imaging.

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References

  1. Basser, P.J., Pajevic, S., Pierpaoli, C., Duda, J., Aldroubi, A.: In vivo fiber trac- tography using DT-MRI data. Magn. Reson. Med. 44, 625–632 (2000)

    Article  Google Scholar 

  2. Conturo, T.E., Lori, N.F., Cull, T.S., Akbudak, E., Snyder, A.Z., Shimony, J.S., McKinstry, B.H., Raichle, M.E.: Tracking neuronal fiber pathways in the living human brain. Proc. Natl. Acad. Sci. 96, 10422–10427 (1999)

    Article  Google Scholar 

  3. Gössl, C., Fahrmeir, L., Pütz, B., Auer, L.M., Auer, D.P.: Fiber tracking from DTI using linear state space models: detectability of the pyramidal tract. NeuroImage 16, 378–388 (2002)

    Article  Google Scholar 

  4. Gudbjartsson, H., Patz, S.: The Rician distribution of noisy MRI data. Magn. Reson. Med. 34, 910–914 (1995)

    Article  Google Scholar 

  5. Hagmann, P., Thiran, J.P., Jonasson, L., Vandergheynst, P., Clarke, S., Maeder, P., Meuli, R.: DTI mapping of human brain connectivity: statistical fibre tracking and virtual dissection. NeuroImage 19, 545–554 (2003)

    Article  Google Scholar 

  6. Jones, D.K., Horsefield, M.A., Simmons, A.: Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging. Magn. Reson. Med. 42, 515–525 (1999)

    Article  Google Scholar 

  7. Jones, D.K., Simmons, A., Williams, S.C.R., Horsfield, M.A.: Non-invasive assess- ment of axonal fiber connectivity in the human brain via diffusion tensor MRI. Magn. Reson. Med. 42, 37–41 (1999)

    Article  Google Scholar 

  8. Lazar, M., Weinstein, D.M., Tsuruda, J.S., Hasan, K.M., Arfanakis, K., Meyerand, M.E., Badie, B., Rowley, H.A., Haughton, V., Field, A., Alexander, A.L.: White matter tractography using diffusion tensor deflection. Human Brain Mapping 18, 306–321 (2003)

    Article  Google Scholar 

  9. Liu, C., Bammer, R., Acar, B., Moseley, M.E.: Characterizing non-Gaussian diffu- sion by using generalized diffusion tensors. Magn. Reson. Med. 51, 924–937 (2004)

    Article  Google Scholar 

  10. Mori, S., Crain, B., Chacko, V.P., van Zijl, P.C.M.: Three dimensional tracking of axonal projections in the brain by magnetic resonance imaging. Ann. of Neurol. 45, 265–269 (1999)

    Article  Google Scholar 

  11. Özarslan, E., Mareci, T.H.: Generalized diffusion tensor imaging and analytical relationships between diffusion tensor imaging and high angular resolution diffusion imaging. Magn. Reson. Med. 50, 955–965 (2003)

    Article  Google Scholar 

  12. Parker, G.J.M., Alexander, D.C.: Probabilistic Monte Carlo based mapping of cerebral connections utilising whole-brain crossing fibre information. In: Kambayashi, Y., Mohania, M., Wöß, W. (eds.) DaWaK 2003. LNCS, vol. 2737, pp. 684–695. Springer, Heidelberg (2003)

    Google Scholar 

  13. Parker, G.J.M., Wheeler-Kingshott, C.A.M., Barker, G.J.: Estimating distributed anatomical connectivity using fast marching methods and diffusion tensor imaging. IEEE Trans. Med. Imag. 21, 505–512 (2002)

    Article  Google Scholar 

  14. Pierpaoli, C., Basser, P.J.: Toward a quantitative assessment of diffusion anisotropy. Magn. Reson. Med. 36, 893–906 (1996)

    Article  Google Scholar 

  15. Poupon, C., Clark, C.A., Frouin, V., Regis, J., Bloch, I., Le Bihan, D., Mangin, J.: Regularization of diffusion-based direction maps for the tracking of brain white matter fascicles. NeuroImage 12, 184–195 (2000)

    Article  Google Scholar 

  16. Stejskal, E.O., Tanner, J.E.: Spin diffusion measurements: spin echoes in the pres- ence of a time-dependent field gradient. J. Chem. Phys. 42, 288–292 (1965)

    Article  Google Scholar 

  17. Tournier, J.-D., Calamante, F., Gadian, D.G., Connelly, A.: Diffusion-weighted magnetic resonance imaging fibre tracking using a front evolution algorithm. Neu- roImage 20, 276–288 (2003)

    Google Scholar 

  18. Westin, C.-F., Maier, S.E., Mamata, H., Nabavi, A., Jolesz, F.A., Kikinis, R.: Processing and visualization for diffusion tensor MRI. Med. Imag. Anal. 6, 93–108 (2002)

    Article  Google Scholar 

  19. Wiegell, M.R., Larsson, H.B., Wedeen, V.J.: Fiber crossing in human brain de- picted with diffusion tensor MR imaging. Radiology 217, 897–903 (2000)

    Google Scholar 

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© 2005 Springer-Verlag Berlin Heidelberg

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Zhang, J., Kang, N., Rose, S.E. (2005). Approximating Anatomical Brain Connectivity with Diffusion Tensor MRI Using Kernel-Based Diffusion Simulations. In: Christensen, G.E., Sonka, M. (eds) Information Processing in Medical Imaging. IPMI 2005. Lecture Notes in Computer Science, vol 3565. Springer, Berlin, Heidelberg. https://doi.org/10.1007/11505730_6

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  • DOI: https://doi.org/10.1007/11505730_6

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-540-26545-0

  • Online ISBN: 978-3-540-31676-3

  • eBook Packages: Computer ScienceComputer Science (R0)

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