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Joke Reumers
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2010 – 2019
- 2017
- [j16]Marijke Van Moerbeke
, Adetayo Kasim
A random effects model for the identification of differential splicing (REIDS) using exon and HTA arrays. BMC Bioinform. 18(1): 273:1-273:14 (2017) - 2015
- [j15]Bie M. P. Verbist, Kim Thys, Joke Reumers
VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering. Bioinform. 31(1): 94-101 (2015) - [j14]Dries Decap, Joke Reumers
Halvade: scalable sequence analysis with MapReduce. Bioinform. 31(15): 2482-2488 (2015) - [j13]Bie M. P. Verbist, Lieven Clement, Joke Reumers
ViVaMBC: estimating viral sequence variation in complex populations from illumina deep-sequencing data using model-based clustering. BMC Bioinform. 16: 59:1-59:11 (2015) - [j12]Koen Van der Borght, Kim Thys, Yves Wetzels, Lieven Clement, Bie M. P. Verbist, Joke Reumers
QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles. BMC Bioinform. 16: 379:1-379:14 (2015) - [c3]Dries Decap, Joke Reumers
Performance Analysis of a Parallel, Multi-node Pipeline for DNA Sequencing. PPAM (2) 2015: 233-242 - 2013
- [j11]Ryo Sakai, Matthieu Moisse
Pipit: visualizing functional impacts of structural variations. Bioinform. 29(17): 2206-2207 (2013) - 2012
- [j10]Andrew Stubbs, Elizabeth A. McClellan, Sebastiaan Horsman, Saskia D. Hiltemann, Ivo Palli, Stephan Nouwens, Anton H. J. Koning, Frits Hoogland, Joke Reumers, Daphne Heijsman, Sigrid Swagemakers, Andreas Kremer
Huvariome: a web server resource of whole genome next-generation sequencing allelic frequencies to aid in pathological candidate gene selection. J. Clin. Bioinform. 2: 19 (2012) - [j9]Greet De Baets, Joost J. J. van Durme, Joke Reumers
SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants. Nucleic Acids Res. 40(Database-Issue): 935-939 (2012) - 2011
- [j8]Greet De Baets, Joke Reumers
An Evolutionary Trade-Off between Protein Turnover Rate and Protein Aggregation Favors a Higher Aggregation Propensity in Fast Degrading Proteins. PLoS Comput. Biol. 7(6) (2011) - 2010
- [j7]Peter Vanhee, Joke Reumers
PepX: a structural database of non-redundant protein-peptide complexes. Nucleic Acids Res. 38(Database-Issue): 545-551 (2010)
2000 – 2009
- 2009
- [j6]Joke Reumers
Using structural bioinformatics to investigate the impact of non synonymous SNPs and disease mutations: scope and limitations. BMC Bioinform. 10(S-8): 9 (2009) - 2008
- [j5]Joke Reumers
Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases. Nucleic Acids Res. 36(Database-Issue): 825-829 (2008) - [j4]Lies Baeten, Joke Reumers
Reconstruction of Protein Backbones from the BriX Collection of Canonical Protein Fragments. PLoS Comput. Biol. 4(5) (2008) - [c2]Joke Reumers, Joost Schymkowitz, Frederic Rousseau:
Using structural bioinformatics to investigate the impact of non synonymous SNPs and disease mutations: scope and limitations. AIMM 2008 - 2006
- [j3]Joke Reumers
SNPeffect v2.0: a new step in investigating the molecular phenotypic effects of human non-synonymous SNPs. Bioinform. 22(17): 2183-2185 (2006) - [j2]Lucía Conde
PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes. Nucleic Acids Res. 34(Web-Server-Issue): 621-625 (2006) - 2005
- [j1]Joke Reumers
SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs. Nucleic Acids Res. 33(Database-Issue): 527-532 (2005) - 2003
- [c1]Sam Maes, Joke Reumers, Bernard Manderick:
Identifiability of Causal Effects in a Multi-Agent Causal Model. IAT 2003: 605-608
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