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Ihor Smal
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2020 – today
- 2024
- [j17]Vincent J. W. Hellebrekers, Theo van Walsum
, Ihor Smal, Sandra A. P. Cornelissen, Wim H. van Zwam, Aad van der Lugt, Matthijs van der Sluijs, Ruisheng Su
Automated image registration of cerebral digital subtraction angiography. Int. J. Comput. Assist. Radiol. Surg. 19(1): 147-150 (2024) - [j16]Anne-Wietje Zwijnen, Leon Watzema
Self-adaptive deep learning-based segmentation for universal and functional clinical and preclinical CT image analysis. Comput. Biol. Medicine 179: 108853 (2024) - [j15]Hélène Kabbech, Ihor Smal
TrackSegNet: a tool for trajectory segmentation into diffusive states using supervised deep learning. J. Open Source Softw. 9(98): 6157 (2024) - [c28]Vincent J. W. Hellebrekers, Josiah B. Passmore, Lukas C. Kapitein, Ihor Smal:
An Iterative Frequency-Based Approach for Gelmap Grid Deformation Correction. ISBI 2024: 1-4 - [c27]Tijmen H. de Wolf, Daria Roman, Julie Nonnekens, Ihor Smal:
Weakly Supervised 3d Image Segmentation in Fluorescence Microscopy Using Maximum Intensity Projections. ISBI 2024: 1-4 - [i4]Yao Yao, Ihor Smal, Ilya Grigoriev, Anna Akhmanova, Erik Meijering:
Deep Joint Denoising and Detection for Enhanced Intracellular Particle Analysis. CoRR abs/2408.07903 (2024) - 2023
- [c26]Hélène Kabbech
Accurate Estimation of Particle Dynamics Bypassing Substrate Drift Bias: Application to Cell Nucleus Motion. ISBI 2023: 1-4 - [c25]Tijmen H. de Wolf, Matthijs Snelders, Jeroen Essers
CA-LIME: An Algorithm that Explains Classification Results of Cardiomyocyte Beating. ISBI 2023: 1-4 - 2022
- [c24]Hélène Kabbech
Identification of Diffusive States in Tracking Applications Using Unsupervised Deep Learning Methods. ISBI 2022: 1-4 - 2021
- [c23]Wei Zhao, Eleni Maria Manolika, Arnab Ray Chaudhuri, Ihor Smal:
Detection Of Replication Forks In Em Images Using Faster R-Cnn. ISBI 2021: 1786-1789 - 2020
- [j14]Yao Yao, Ihor Smal, Ilya Grigoriev, Anna Akhmanova, Erik Meijering
Deep-learning method for data association in particle tracking. Bioinform. 36(19): 4935-4941 (2020) - [j13]Hua Ma
Dynamic coronary roadmapping via catheter tip tracking in X-ray fluoroscopy with deep learning based Bayesian filtering. Medical Image Anal. 61: 101634 (2020) - [i3]Hua Ma, Ihor Smal, Joost Daemen, Theo van Walsum:
Dynamic Coronary Roadmapping via Catheter Tip Tracking in X-ray Fluoroscopy with Deep Learning Based Bayesian Filtering. CoRR abs/2001.03801 (2020)
2010 – 2019
- 2019
- [j12]Gadea Mata
Automated Neuron Detection in High-Content Fluorescence Microscopy Images Using Machine Learning. Neuroinformatics 17(2): 253-269 (2019) - [c22]Herman Bergwerf
Nerve Fiber Segmentation in Bright-Field Microscopy Images of Skin Biopsies Using Deep Learning. ISBI 2019: 232-235 - [c21]Ihor Smal, Yao Yao, Niels Galjart, Erik Meijering:
Facilitating Data Association In Particle Tracking Using Autoencoding And Score Matching. ISBI 2019: 1523-1526 - 2018
- [c20]Yao Yao, Ihor Smal, Erik Meijering:
Deep neural networks for data association in particle tracking. ISBI 2018: 458-461 - [c19]Ihor Smal, Niels Galjart, Erik Meijering:
Accurate estimation of intracellular dynamics and underlying spatial structures using hierarchical trajectory smoothing. ISBI 2018: 973-976 - 2017
- [j11]Wei Sun
Stochastic optimization with randomized smoothing for image registration. Medical Image Anal. 35: 146-158 (2017) - [j10]Pierre Ambrosini
A Hidden Markov Model for 3D Catheter Tip Tracking With 2D X-ray Catheterization Sequence and 3D Rotational Angiography. IEEE Trans. Medical Imaging 36(3): 757-768 (2017) - [c18]Ihor Smal, Sreya Basu, Laura Sayas, Niels Galjart, Erik Meijering:
Gaussian processes for trajectory analysis in microtubule tracking applications. ISBI 2017: 206-209 - 2016
- [j9]Isabel Schlangen
Marker-Less Stage Drift Correction in Super-Resolution Microscopy Using the Single-Cluster PHD Filter. IEEE J. Sel. Top. Signal Process. 10(1): 193-202 (2016) - [j8]Miroslav Radojevic
Fuzzy-Logic Based Detection and Characterization of Junctions and Terminations in Fluorescence Microscopy Images of Neurons. Neuroinformatics 14(2): 201-219 (2016) - [c17]Ihor Smal, Erik Meijering:
Poisson Point Processes for Solving Stochastic Inverse Problems in Fluorescence Microscopy. ECCV Workshops (1) 2016: 326-338 - [c16]Gadea Mata
Automatic detection of neurons in high-content microscope images using machine learning approaches. ISBI 2016: 330-333 - 2015
- [j7]Ihor Smal, Erik Meijering:
Quantitative comparison of multiframe data association techniques for particle tracking in time-lapse fluorescence microscopy. Medical Image Anal. 24(1): 163-189 (2015) - [c15]Miroslav Radojevic, Ihor Smal, Erik Meijering:
Automated neuron morphology reconstruction using fuzzy-logic detection and Bayesian tracing algorithms. ISBI 2015: 885-888 - [c14]Pierre Ambrosini, Ihor Smal, Daniel Ruijters
3D Catheter Tip Tracking in 2D X-Ray Image Sequences Using a Hidden Markov Model and 3D Rotational Angiography. AE-CAI 2015: 38-49 - 2014
- [c13]Ömer Demirel, Ihor Smal, Wiro J. Niessen
An adaptive distributed resampling algorithm with non-proportional allocation. ICASSP 2014: 1635-1639 - [c12]Miroslav Radojevic, Ihor Smal, Wiro J. Niessen, Erik Meijering:
Fuzzy logic based detection of neuron bifurcations in microscopy images. ISBI 2014: 1307-1310 - 2013
- [i2]Ömer Demirel, Ihor Smal, Wiro J. Niessen, Erik Meijering, Ivo F. Sbalzarini:
PPF - A Parallel Particle Filtering Library. CoRR abs/1310.5045 (2013) - [i1]Ömer Demirel, Ihor Smal, Wiro J. Niessen, Erik Meijering, Ivo F. Sbalzarini:
Piecewise Constant Sequential Importance Sampling for Fast Particle Filtering. CoRR abs/1310.5541 (2013) - 2012
- [j6]Ihor Smal, Noemí Carranza-Herrezuelo
Reversible jump MCMC methods for fully automatic motion analysis in tagged MRI. Medical Image Anal. 16(1): 301-324 (2012) - 2011
- [c11]Ihor Smal, Noemí Carranza-Herrezuelo
Quantitative comparison of tracking methods for motion analysis in tagged MRI. ISBI 2011: 345-348 - [c10]Noemí Carranza-Herrezuelo
Automated lineage tree reconstruction from Caenorhabditis elegans image data using particle filtering based cell tracking. ISBI 2011: 1921-1924 - [c9]Ihor Smal, Noemí Carranza-Herrezuelo
Trans-Dimensional MCMC Methods for Fully Automatic Motion Analysis in Tagged MRI. MICCAI (1) 2011: 573-580 - 2010
- [j5]Ihor Smal, Ilya Grigoriev, Anna Akhmanova, Wiro J. Niessen
Microtubule Dynamics Analysis Using Kymographs and Variable-Rate Particle Filters. IEEE Trans. Image Process. 19(7): 1861-1876 (2010) - [j4]Ihor Smal, Marco Loog, Wiro J. Niessen
Quantitative Comparison of Spot Detection Methods in Fluorescence Microscopy. IEEE Trans. Medical Imaging 29(2): 282-301 (2010) - [c8]Ihor Smal, Wiro J. Niessen
Particle filtering methods for motion analysis in tagged MRI. ISBI 2010: 488-491
2000 – 2009
- 2009
- [c7]Ihor Smal, Marco Loog, Wiro J. Niessen
Quantitative Comparison of Spot Detection Methods in Live-Cell Fluorescence Microscopy Imaging. ISBI 2009: 1175-1178 - 2008
- [j3]Ihor Smal, Erik Meijering, Katharina Draegestein, Niels Galjart, Ilya Grigoriev, Anna Akhmanova, M. E. van Royen
Multiple object tracking in molecular bioimaging by Rao-Blackwellized marginal particle filtering. Medical Image Anal. 12(6): 764-777 (2008) - [j2]Ihor Smal, Katharina Draegestein, Niels Galjart, Wiro J. Niessen
Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images: Application to Microtubule Growth Analysis. IEEE Trans. Medical Imaging 27(6): 789-804 (2008) - [c6]Ihor Smal, Wiro J. Niessen
A new detection scheme for multiple object tracking in fluorescence microscopy by joint probabilistic data association filtering. ISBI 2008: 264-267 - 2007
- [c5]Michiel Schaap, Ihor Smal, Coert Metz, Theo van Walsum, Wiro J. Niessen:
Bayesian Tracking of Elongated Structures in 3D Images. IPMI 2007: 74-85 - [c4]Ihor Smal, Katharina Draegestein, Niels Galjart, Wiro J. Niessen, Erik Meijering:
Rao-Blackwellized Marginal Particle Filtering for Multiple Object Tracking in Molecular Bioimaging. IPMI 2007: 110-121 - [c3]Ihor Smal, Wiro J. Niessen
Advanced Particle Filtering for Multiple Object Tracking in Dynamic Fluorescence Microscopy Images. ISBI 2007: 1048-1051 - [c2]Michiel Schaap, Rashindra Manniesing
Bayesian Tracking of Tubular Structures and Its Application to Carotid Arteries in CTA. MICCAI (2) 2007: 562-570 - 2006
- [j1]Erik Meijering, Ihor Smal, Gaudenz Danuser:
Tracking in molecular bioimaging. IEEE Signal Process. Mag. 23(3): 46-53 (2006) - [c1]Ihor Smal, Wiro J. Niessen, Erik Meijering:
Bayesian tracking for fluorescence microscopic imaging. ISBI 2006: 550-553
Coauthor Index
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