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Hongyi Xin
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2020 – today
- 2024
- [j13]Meihong Pan, Hongyi Xin, Hong-Bin Shen:
Semantic-Based Implicit Feature Transform for Few-Shot Classification. Int. J. Comput. Vis. 132(11): 5014-5029 (2024) - [c6]Jieli Zhou, Cheng Ye, Pengcheng Xu, Hongyi Xin:
Team YXZ at BioLaySumm: Adapting Large Language Models for Biomedical Lay Summarization. BioNLP@ACL 2024: 818-825 - 2023
- [j12]Meihong Pan
, Hongyi Xin
Few-shot classification with task-adaptive semantic feature learning. Pattern Recognit. 141: 109594 (2023) - [i4]Pengcheng Xu, Jinpu Cai, Yulin Gao, Ziqi Rong, Hongyi Xin:
MIRACLE: Multi-task Learning based Interpretable Regulation of Autoimmune Diseases through Common Latent Epigenetics. CoRR abs/2306.13866 (2023) - 2022
- [j11]Yiran Shan
TIST: Transcriptome and Histopathological Image Integrative Analysis for Spatial Transcriptomics. Genom. Proteom. Bioinform. 20(5): 974-988 (2022) - [j10]Jieli Zhou
SODA: Detecting COVID-19 in Chest X-Rays With Semi-Supervised Open Set Domain Adaptation. IEEE ACM Trans. Comput. Biol. Bioinform. 19(5): 2605-2612 (2022) - 2020
- [j9]Hongyi Xin
Context-aware seeds for read mapping. Algorithms Mol. Biol. 15(1): 10 (2020) - [j8]Qiuyu Lian, Hongyi Xin
Artificial-cell-type aware cell-type classification in CITE-seq. Bioinform. 36(Supplement-1): i542-i550 (2020) - [j7]Qi Yan
Deep-learning-based prediction of late age-related macular degeneration progression. Nat. Mach. Intell. 2(2): 141-150 (2020)
2010 – 2019
- 2019
- [c5]K. R. Jayaram, Anshul Gandhi, Hongyi Xin
Adaptively Accelerating Map-Reduce/Spark with GPUs: A Case Study. ICAC 2019: 105-114 - [c4]Hongyi Xin, Mingfu Shao, Carl Kingsford:
Context-Aware Seeds for Read Mapping. WABI 2019: 15:1-15:13 - 2018
- [j6]Jeremie S. Kim, Damla Senol Cali
GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies. BMC Genom. 19(S2) (2018) - 2017
- [j5]Mohammed Alser, Hasan Hassan, Hongyi Xin
GateKeeper: a new hardware architecture for accelerating pre-alignment in DNA short read mapping. Bioinform. 33(21): 3355-3363 (2017) - [i3]Jeremie S. Kim, Damla Senol Cali, Hongyi Xin, Donghyuk Lee, Saugata Ghose, Mohammed Alser, Hasan Hassan, Oguz Ergin, Can Alkan, Onur Mutlu:
GRIM-Filter: Fast Seed Location Filtering in DNA Read Mapping Using Processing-in-Memory Technologies. CoRR abs/1711.01177 (2017) - 2016
- [j4]Hongyi Xin
Optimal seed solver: optimizing seed selection in read mapping. Bioinform. 32(11): 1632-1642 (2016) - [i2]Mohammed Alser, Hasan Hassan, Hongyi Xin, Oguz Ergin, Onur Mutlu, Can Alkan:
GateKeeper: Enabling Fast Pre-Alignment in DNA Short Read Mapping with a New Streaming Accelerator Architecture. CoRR abs/1604.01789 (2016) - 2015
- [j3]Hongyi Xin
Shifted Hamming distance: a fast and accurate SIMD-friendly filter to accelerate alignment verification in read mapping. Bioinform. 31(10): 1553-1560 (2015) - [i1]Hongyi Xin, Richard L. Zhu, Sunny Nahar, John Emmons, Gennady Pekhimenko, Carl Kingsford, Can Alkan, Onur Mutlu:
Optimal Seed Solver: Optimizing Seed Selection in Read Mapping. CoRR abs/1506.08235 (2015) - 2014
- [j2]Vivek Seshadri, Samihan Yedkar, Hongyi Xin
Mitigating Prefetcher-Caused Pollution Using Informed Caching Policies for Prefetched Blocks. ACM Trans. Archit. Code Optim. 11(4): 51:1-51:22 (2014) - 2013
- [j1]Hongyi Xin
Accelerating read mapping with FastHASH. BMC Genom. 14(S-1): S13 (2013) - [c3]Chuanjun Zhang, Glenn G. Ko, Jungwook Choi, Shang-nien Tsai, Minje Kim, Abner Guzmán-Rivera, Rob A. Rutenbar
EMERALD: Characterization of emerging applications and algorithms for low-power devices. ISPASS 2013: 122-123 - [c2]Gennady Pekhimenko, Vivek Seshadri, Yoongu Kim, Hongyi Xin
Linearly compressed pages: a low-complexity, low-latency main memory compression framework. MICRO 2013: 172-184 - 2012
- [c1]Joseph L. Greathouse, Hongyi Xin
A case for unlimited watchpoints. ASPLOS 2012: 159-172
Coauthor Index
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