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Aik Choon Tan
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2020 – today
- 2024
- [j23]Xiang Liu
, Nancy Gillis
An Epigenomic fingerprint of human cancers by landscape interrogation of super enhancers at the constituent level. PLoS Comput. Biol. 20(2) (2024) - 2023
- [j22]Alyssa N. Obermayer, Darwin Chang, Gabrielle Nobles, Mingxiang Teng
PATH-SURVEYOR: pathway level survival enquiry for immuno-oncology and drug repurposing. BMC Bioinform. 24(1): 266 (2023) - [j21]Ramin Homayouni, Prashanti Manda, Aik Choon Tan
Editorial: AI and data science in drug development and public health: Highlights from the MCBIOS 2022 conference. Frontiers Big Data 6 (2023) - [j20]Ching-Nung Lin
NuKit: A deep learning platform for fast nucleus segmentation of histopathological images. J. Bioinform. Comput. Biol. 21(1): 2350002:1-2350002:14 (2023) - 2021
- [j19]Mengyu Xie, Kyubum Lee
TIMEx: tumor-immune microenvironment deconvolution web-portal for bulk transcriptomics using pan-cancer scRNA-seq signatures. Bioinform. 37(20): 3681-3683 (2021) - [j18]Kyubum Lee
Deep Learning of Histopathology Images at the Single Cell Level. Frontiers Artif. Intell. 4: 754641 (2021) - [j17]Zhaoping Xiong
Crowdsourced identification of multi-target kinase inhibitors for RET- and TAU- based disease: The Multi-Targeting Drug DREAM Challenge. PLoS Comput. Biol. 17(9) (2021)
2010 – 2019
- 2019
- [j16]Minji Jeon, Donghyeon Park, Jinhyuk Lee
ReSimNet: drug response similarity prediction using Siamese neural networks. Bioinform. 35(24): 5249-5256 (2019) - [j15]Minjae Yoo, Jimin Shin, Hyunmin Kim, Jihye Kim, Jaewoo Kang, Aik Choon Tan
Exploring the molecular mechanisms of Traditional Chinese Medicine components using gene expression signatures and connectivity map. Comput. Methods Programs Biomed. 174: 33-40 (2019) - 2018
- [j14]Rani K. Powers
GSEA-InContext: identifying novel and common patterns in expression experiments. Bioinform. 34(13): i555-i564 (2018) - [j13]Kyubum Lee
Deep learning of mutation-gene-drug relations from the literature. BMC Bioinform. 19(1): 21:1-21:13 (2018) - [j12]Zongliang Yue
PAGER 2.0: an update to the pathway, annotated-list and gene-signature electronic repository for Human Network Biology. Nucleic Acids Res. 46(Database-Issue): D668-D676 (2018) - 2016
- [j11]Kyubum Lee
BRONCO: Biomedical entity Relation ONcology COrpus for extracting gene-variant-disease-drug relations. Database J. Biol. Databases Curation 2016 (2016) - [j10]Kyubum Lee
HiPub: translating PubMed and PMC texts to networks for knowledge discovery. Bioinform. 32(18): 2886-2888 (2016) - [j9]Jennifer Hintzsche
IMPACT: a whole-exome sequencing analysis pipeline for integrating molecular profiles with actionable therapeutics in clinical samples. J. Am. Medical Informatics Assoc. 23(4): 721-730 (2016) - 2015
- [j8]Minjae Yoo, Jimin Shin, Jihye Kim, Karen A. Ryall, Kyubum Lee
DSigDB: drug signatures database for gene set analysis. Bioinform. 31(18): 3069-3071 (2015) - [j7]Karen A. Ryall, Jimin Shin, Minjae Yoo, Trista K. Hinz, Jihye Kim, Jaewoo Kang, Lynn E. Heasley, Aik Choon Tan
Identifying kinase dependency in cancer cells by integrating high-throughput drug screening and kinase inhibition data. Bioinform. 31(23): 3799-3806 (2015) - [j6]Karen A. Ryall, Aik Choon Tan
Systems biology approaches for advancing the discovery of effective drug combinations. J. Cheminformatics 7: 7 (2015) - 2014
- [j5]Minji Jeon, Sunwon Lee, Kyubum Lee
BEReX: Biomedical Entity-Relationship eXplorer. Bioinform. 30(1): 135-136 (2014) - [j4]Jihye Kim, Vihas T. Vasu
Bioinformatics-driven discovery of rational combination for overcoming EGFR-mutant lung cancer resistance to EGFR therapy. Bioinform. 30(17): 2393-2398 (2014)
2000 – 2009
- 2008
- [j3]Lei Xu, Aik Choon Tan
Merging microarray data from separate breast cancer studies provides a robust prognostic test. BMC Bioinform. 9 (2008) - [c4]Donald Geman, Bahman Afsari, Aik Choon Tan, Daniel Q. Naiman:
Microarray Classification from Several Two-Gene Expression Comparisons. ICMLA 2008: 583-585 - 2005
- [j2]Aik Choon Tan
Simple decision rules for classifying human cancers from gene expression profiles. Bioinform. 21(20): 3896-3904 (2005) - [j1]Lei Xu, Aik Choon Tan
Robust prostate cancer marker genes emerge from direct integration of inter-study microarray data. Bioinform. 21(20): 3905-3911 (2005) - 2004
- [c3]Ali Al-Shahib, Chao He, Aik Choon Tan, Mark A. Girolami
An Assessment of Feature Relevance in Predicting Protein Function from Sequence. IDEAL 2004: 52-57 - 2003
- [c2]Aik Choon Tan, David R. Gilbert:
An Empirical Comparison of Supervised Machine Learning Techniques in Bioinformatics. APBC 2003: 219-222 - [c1]Aik Choon Tan, David R. Gilbert, Yves Deville:
Integrative machine learning approach for multi-class SCOP protein fold classification. German Conference on Bioinformatics 2003: 153-159
Coauthor Index
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