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Jian Zhang 0037

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affiliation: Shanghai Jiao Tong University, School of Medicine, China

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Jian Zhang (aka: Ji'an Zhang) — disambiguation page
Jian Zhang 0001 — Chinese Academy of Science, Institute of Software, China
Jian Zhang 0002 — University of Technology, Sydney, Faculty of Engineering and Information Technology, Ultimo, NSW, Australia (and 4 more)
Jian Zhang 0003 — Purdue University, Department of Statistics, West Lafayette, IN, USA (and 2 more)
Jian Zhang 0004 — Louisiana State University, Department of Computer Science, Baton Rouge, LA, USA (and 3 more)
Jian Zhang 0005 — Microsoft Corp., Redmond, WA, USA (and 1 more)
Jian Zhang 0006 — Drexel University, Philadelphia, PA, USA
Jian Zhang 0007 — Tulane University, New Orleans, USA
Jian Zhang 0008 — The University of York, Department of Mathematics, UK
Jian Zhang 0009 — East China University of Science and Technology, China

Jian Zhang 0010 — Wuhan University, School of Computer Science, Wuhan, China
Jian Zhang 0011 — Southeast University, School of Transportation, Jiangsu Key Laboratory of Urban ITS, Nanjing, China
Jian Zhang 0012 — Huazhong Agricultural University, College of Resource and Environment, Wuhan, China
Jian Zhang 0013 — Zhejiang University, College of Electrical Engineering, Hangzhou, China
Jian Zhang 0014 — McGill University, Montreal, QC, Canada (and 1 more)
Jian Zhang 0015 — Chongqing University, College of Communication Engineering, China
Jian Zhang 0016 — City University of Hong Kong, Department of System Engineering and Engineering Management, Hong Kong
Jian Zhang 0017 — Chinese Academy of Sciences, Beijing Institute of Genomics, Key Laboratory of Genomics and Precision Medicine, China
Jian Zhang 0018 — Peking University, School of Electronic and Computer Engineering, Shenzhen Graduate School, Shenzhen, China (and 3 more)
Jian Zhang 0019 — China University of Mining and Technology, School of Computer Science and Technology, Xuzhou, China (and 1 more)
Jian Zhang 0020 — Xinyang Normal University, School of Computer and Information Technology, China (and 2 more)
Jian Zhang 0021 — Jilin University, College of Instrumentation and Electrical Engineering, Changchun, China
Jian Zhang 0022 — National University of Defense Technology, College of Computer, Changsha, China
Jian Zhang 0023 — Hangzhou Dianzi University, School of Cyberspace, China (and 1 more)
Jian Zhang 0024 — Nanjing University, Collaborative Innovation Center of Advanced Microstructures, School of Physics, National Laboratory of Solid State Microstructures, China
Jian Zhang 0025 — Huaihai Institute of Technology, Department of Computer Engineering, Lianyungang, China (and 1 more)
Jian Zhang 0026 — Hangzhou Normal University, School of Information Science and Technology, China (and 3 more)
Jian Zhang 0027 — Hebei Polytechnic University, College of Information, Tangshan, China
Jian Zhang 0028 — Auburn University, RFID Laboratory, AL, USA
Jian Zhang 0029 — Arizona State University, Tempe, USA
Jian Zhang 0030 — University of Technology of Troyes, France
Jian Zhang 0031 — University of Darmstadt, Germany
Jian Zhang 0032 — Peking University, Institute of Computer Science and Technology, Beijing, China
Jian Zhang 0033 — Xidian University, State Key Laboratory of Integrated Service Networks, Xi'an, China
Jian Zhang 0034 — Central South University, School of Resources and Safety Engineering, Changsha, China
Jian Zhang 0035 — Zhejiang University, School of Mathematical Sciences, Hangzhou, China (and 1 more)
Jian Zhang 0036 — Texas Woman's University, Denton, TX, USA
Jian Zhang 0038 — National Institutes of Health, Bethesda, MD, USA
Jian Zhang 0039 — North China Electric Power University, State Key Laboratory of Alternate Electrical Power System With Renewable Energy Sources, Beijing, China
Jian Zhang 0040 — National Digital Switching System Engineering and Technological Research Center, Zhengzhou, China
Jian Zhang 0041 — Southeast University, School of Civil Engineering, Jiangsu Key Laboratory of Engineering Mechanics, Nanjing, China
Jian Zhang 0042 — École centrale de Lille, Villeneuve-d'Ascq, France
Jian Zhang 0043 — Southwest Jiaotong University, School of Mechanical Engineering, Chengdu, China
Jian Zhang 0044 — Harbin Engineering University, College of Power and Energy Engineering, China (and 1 more)
Jian Zhang 0045 — University of Technology of Belfort-Montbéliard, Belfort, France
Jian Zhang 0046 — Space Engineering University, PLA Strategic Support Force, Beijing, China
Jian Zhang 0047 — Beijing University of Posts and Telecommunications, School of Information and Communication Engineering, China
Jian Zhang 0048 — Central South University, School of Computer Science and Engineering, Changsha, China
Jian Zhang 0049 — Stanford University, Department of Computer Science, Stanford, CA, USA (and 2 more)
Jian Zhang 0050 — Apple Inc., Cupertino, CA, USA (and 1 more)
Jian Zhang 0051 — Georgetown University Medical Center, Washington, DC, USA
Jian Zhang 0052 — Hunan University of Commerce, School of Mathematics and Statistics, Key Laboratory of Hunan Province for Mobile Business Intelligence, Changsha, China (and 1 more)
Jian Zhang 0053 — South China University of Technology, School of Electric Power Engineering, Guangzhou, China
Jian Zhang 0054 — Nanjing University of Information Science and Technology, School of Computer and Software, Nanjing, China
Jian Zhang 0055 — Tongji University, School of Mechanical Engineering, Shanghai, China
Jian Zhang 0056 — Sichuan Normal University, School of Physics and Electronic Engineering, Chengdu, China
Jian Zhang 0057 — Central University of Finance and Economics, School of Government, Beijing, China
Jian Zhang 0058 — Nanjing University of Aeronautics and Astronautics, College of Automation Engineering, Center for More-Electric-Aircraft Power System, Nanjing, China
Jian Zhang 0059 — Beijing University of Posts and Telecommunications, National Engineering Lab for Mobile Network Technologies, Beijing, China
Jian Zhang 0060 — East China Normal University, Shanghai Key Laboratory of Multidimensional Information Processing, Shanghai, China
Justin Jian Zhang (aka: Jian Zhang 0061) — Dongguan University of Technology, Engineering Technology Institute, Dongguan, China (and 1 more)
Jian Zhang 0062 — Jiangsu University, Department of Mechanics and Engineering Science, Zhenjiang, China (and 1 more)
Jian Zhang 0063 — University of Kent, School of Mathematics, Statistics and Actuarial Science, Canterbury, UK
Jian Zhang 0064 — Zhengzhou University, School of Mathematics and Statistics, Zhengzhou, China (and 1 more)
Jian Zhang 0065 — Sichuan Normal University, College of Mathematics and Software Science, Chengdu, China
Jian Zhang 0066 — Rutgers University, Department of Electrical and Computer Engineering, Piscataway, NJ, USA
Jian Zhang 0067 — EPFL, Integrated Systems Laboratory, Lausanne, Switzerland
Jian Zhang 0068 — Tianjin University of Technology, School of Computer Science and Engineering, Tianjin Key Laboratory of Intelligence Computing and Novel Software Technology, Tianjin, China
Jian Zhang 0069 — Broadcom Corp., San Diego, CA, USA (and 1 more)
Jian Zhang 0070 — Chinese Academy of Sciences, Computer Network Information Center, Beijing, China (and 2 more)
Jian Zhang 0071 — Delft University of Technology, Department of Precision & Microsystems Engineering, Delft, Netherlands
Jian Zhang 0072 — University of Jyväskylä Department of Mathematical Information Technology, Jyväskylä, Finland
Jian Zhang 0073 — University of Rostock, Institute of Automation, Rostock, Germany
Jian Zhang 0074 — Columbia University, Department of Mechanical Engineering, New York, NY, USA
Jian Zhang 0075 — University of Science and Technology of China, Hefei, China (and 1 more)
Jian Zhang 0076 — Waseda University, Graduate School of Information, Production and Systems, Tokyo, Japan
Jian Zhang 0077 — Ohio State University, Department of Statistics, Columbus, OH, USA
Jian Zhang 0078 — SUNY Downstate Medical Center, Henri Begleiter Neurodynamics Laboratory, Brooklyn, NY, USA (and 1 more)
Jian Zhang 0079 — Shanghai Jiao Tong University, Shanghai Institute for Advanced Communication and Data Science, China
Jian Zhang 0080 — Beijing Information Science and Technology University, School of Economics and Management, China
Jian Zhang 0081 — Southwest Jiaotong University, Faculty of Geosciences and Environmental Engineering, Chengdu, China (and 1 more)

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2020 – today

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2024
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Shaoning Li, Yusong Wang, Mingyu Li, Jian Zhang, Bin Shao, Nanning Zheng, Jian Tang:
F³low: Frame-to-Frame Coarse-grained Molecular Dynamics with SE(3) Guided Flow Matching. CoRR abs/2405.00751 (2024)
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Shaoning Li, Mingyu Li, Yusong Wang, Xinheng He, Nanning Zheng, Jian Zhang, Pheng-Ann Heng:
Improving AlphaFlow for Efficient Protein Ensembles Generation. CoRR abs/2407.12053 (2024)
2023
[j30]
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Xiaokun Hong, Ningshan Li, Jiyang Lv, Yan Zhang, Jing Li, Jian Zhang, Hai-Feng Chen:
PTMint database of experimentally verified PTM regulation on protein-protein interaction. Bioinform. 39(1) (2023)
[j29]
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Xiaoyue Ji, Xiaochen Cui, Zhengxin Li, Taeyoung Choi, Ying Wang, Wen Xiao, Yunshuo Zhao, Jinyin Zha, Jian Zhang, Hai-Feng Chen, Zhengtian Yu:
Research and Evaluation of the Allosteric Protein-Specific Force Field Based on a Pre-Training Deep Learning Model. J. Chem. Inf. Model. 63(8): 2456-2468 (2023)
[j28]
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Jinyin Zha, Qian Li, Xinyi Liu, Weidong Lin, Tingting Wang, Jiacheng Wei, Ziliang Zhang, Xun Lu, Jing Wu, Duan Ni, Kun Song, Liang Zhang, Xuefeng Lu, Shaoyong Lu, Jian Zhang:
AlloReverse: multiscale understanding among hierarchical allosteric regulations. Nucleic Acids Res. 51(W1): 33-38 (2023)
[j27]
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Qianqian Song, Mingyu Li, Qian Li, Xun Lu, Kun Song, Ziliang Zhang, Jiale Wei, Liang Zhang, Jiacheng Wei, Youqiong Ye, Jinyin Zha, Qiufen Zhang, Qiang Gao, Jiang Long, Xinyi Liu, Xuefeng Lu, Jian Zhang:
DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations. Nucleic Acids Res. 51(W1): 129-133 (2023)
2022
[j26]
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Hao Zhang, Duan Ni, Jigang Fan, Minyu Li, Jian Zhang, Chen Hua, Ruth Nussinov, Shaoyong Lu:
Markov State Models and Molecular Dynamics Simulations Reveal the Conformational Transition of the Intrinsically Disordered Hypervariable Region of K-Ras4B to the Ordered Conformation. J. Chem. Inf. Model. 62(17): 4222-4231 (2022)
2021
[j25]
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Junxi Mu, Hao Liu, Jian Zhang, Ray Luo, Hai-Feng Chen:
Recent Force Field Strategies for Intrinsically Disordered Proteins. J. Chem. Inf. Model. 61(3): 1037-1047 (2021)
[j24]
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Jing Wu, Danjun Li, Xinyi Liu, Qian Li, Xinheng He, Jiale Wei, Xinyi Li, Mingyu Li, Ashfaq Ur Rehman, Yujia Xia, Chengwei Wu, Jian Zhang, Xuefeng Lu:
IDDB: a comprehensive resource featuring genes, variants and characteristics associated with infertility. Nucleic Acids Res. 49(Database-Issue): D1218-D1232 (2021)
2020
[j23]
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Xinyi Liu, Shaoyong Lu, Kun Song, Qiancheng Shen, Duan Ni, Qian Li, Xinheng He, Hao Zhang, Qi Wang, Yingyi Chen, Xinyi Li, Jing Wu, Chunquan Sheng, Guoqiang Chen, Yaqin Liu, Xuefeng Lu, Jian Zhang:
Unraveling allosteric landscapes of allosterome with ASD. Nucleic Acids Res. 48(Database-Issue): D394-D401 (2020)

2010 – 2019

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2019
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Xiaoli An, Shaoyong Lu, Kun Song, Qiancheng Shen, Meilan Huang, Xiaojun Yao, Huanxiang Liu, Jian Zhang:
Are the Apo Proteins Suitable for the Rational Discovery of Allosteric Drugs? J. Chem. Inf. Model. 59(1): 597-604 (2019)
[j21]
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Ren Kong, Feng Wang, Jian Zhang, Fengfei Wang, Shan Chang:
CoDockPP: A Multistage Approach for Global and Site-Specific Protein-Protein Docking. J. Chem. Inf. Model. 59(8): 3556-3564 (2019)
[j20]
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Kun Song, Qian Li, Wei Gao, Shaoyong Lu, Qiancheng Shen, Xinyi Liu, Yongyan Wu, Binquan Wang, Houwen Lin, Guoqiang Chen, Jian Zhang:
AlloDriver: a method for the identification and analysis of cancer driver targets. Nucleic Acids Res. 47(Webserver-Issue): W315-W321 (2019)
2018
[j19]
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Min Huang, Kun Song, Xinyi Liu, Shaoyong Lu, Qiancheng Shen, Renxiao Wang, Jingze Gao, Yuanyuan Hong, Qian Li, Duan Ni, Jianrong Xu, Guoqiang Chen, Jian Zhang:
AlloFinder: a strategy for allosteric modulator discovery and allosterome analyses. Nucleic Acids Res. 46(Webserver-Issue): W451-W458 (2018)
2017
[j18]
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Kun Song, Xinyi Liu, Wenkang Huang, Shaoyong Lu, Qiancheng Shen, Lu Zhang, Jian Zhang:
Improved Method for the Identification and Validation of Allosteric Sites. J. Chem. Inf. Model. 57(9): 2358-2363 (2017)
2016
[j17]
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Luis N. Marenco, Rixin Wang, Robert A. McDougal, Tsviya Olender, Michal Twik, Elspeth A. Bruford, Xinyi Liu, Jian Zhang, Doron Lancet, Gordon M. Shepherd, Chiquito J. Crasto:
ORDB, HORDE, ODORactor and other on-line knowledge resources of olfactory receptor-odorant interactions. Database J. Biol. Databases Curation 2016 (2016)
[j16]
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Shuai Li, Qiancheng Shen, Minyi Su, Xinyi Liu, Shaoyong Lu, Zhongjie Chen, Renxiao Wang, Jian Zhang:
Alloscore: a method for predicting allosteric ligand-protein interactions. Bioinform. 32(10): 1574-1576 (2016)
[j15]
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Qiancheng Shen, Guanqiao Wang, Shuai Li, Xinyi Liu, Shaoyong Lu, Zhongjie Chen, Kun Song, Junhao Yan, Lv Geng, Zhimin Huang, Wenkang Huang, Guoqiang Chen, Jian Zhang:
ASD v3.0: unraveling allosteric regulation with structural mechanisms and biological networks. Nucleic Acids Res. 44(Database-Issue): 527-535 (2016)
2015
[j14]
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Wenkang Huang, Guanqiao Wang, Qiancheng Shen, Xinyi Liu, Shaoyong Lu, Lv Geng, Zhimin Huang, Jian Zhang:
ASBench: benchmarking sets for allosteric discovery. Bioinform. 31(15): 2598-2600 (2015)
2014
[j13]
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Qian Zhang, Wei Zhang, Youyong Li, Junmei Wang, Jian Zhang, Tingjun Hou:
MORT: a powerful foundational library for computational biology and CADD. J. Cheminformatics 6(1): 36 (2014)
[j12]
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Zhimin Huang, Linkai Mou, Qiancheng Shen, Shaoyong Lu, Chuangang Li, Xinyi Liu, Guanqiao Wang, Shuai Li, Lv Geng, Yaqin Liu, Jiawei Wu, Guoqiang Chen, Jian Zhang:
ASD v2.0: updated content and novel features focusing on allosteric regulation. Nucleic Acids Res. 42(Database-Issue): 510-516 (2014)
[j11]
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Shaoyong Lu, Wenkang Huang, Qi Wang, Qiancheng Shen, Shuai Li, Ruth Nussinov, Jian Zhang:
The Structural Basis of ATP as an Allosteric Modulator. PLoS Comput. Biol. 10(9) (2014)
2013
[j10]
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Wenkang Huang, Shaoyong Lu, Zhimin Huang, Xinyi Liu, Linkai Mou, Yu Luo, Yanlong Zhao, Yaqin Liu, Zhongjie Chen, Tingjun Hou, Jian Zhang:
Allosite: a method for predicting allosteric sites. Bioinform. 29(18): 2357-2359 (2013)
[j9]
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Xuben Hou, Jintong Du, Jian Zhang, Lupei Du, Hao Fang, Minyong Li:
How to Improve Docking Accuracy of AutoDock4.2: A Case Study Using Different Electrostatic Potentials. J. Chem. Inf. Model. 53(1): 188-200 (2013)
[j8]
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Ting Shi, Yuhui Han, Weihua Li, Yanlong Zhao, Yaqin Liu, Zhimin Huang, Shaoyong Lu, Jian Zhang:
Exploring the Desumoylation Process of SENP1: A Study Combined MD Simulations with QM/MM Calculations on SENP1-SUMO1-RanGAP1. J. Chem. Inf. Model. 53(9): 2360-2368 (2013)
2012
[j7]
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Shaoyong Lu, Wenkang Huang, Xiaobai Li, Zhimin Huang, Xinyi Liu, Yingyi Chen, Ting Shi, Jian Zhang:
Insights into the Role of Magnesium Triad in myo-Inositol Monophosphatase: Metal Mechanism, Substrate Binding, and Lithium Therapy. J. Chem. Inf. Model. 52(9): 2398-2409 (2012)
[j6]
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Weihua Li, Jing Fu, Feixiong Cheng, Mingyue Zheng, Jian Zhang, Guixia Liu, Yun Tang:
Unbinding Pathways of GW4064 from Human Farnesoid X Receptor As Revealed by Molecular Dynamics Simulations. J. Chem. Inf. Model. 52(11): 3043-3052 (2012)
2011
[j5]
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Xinyi Liu, Xubo Su, Fei Wang, Zhimin Huang, Qi Wang, Zhen Li, Ruina Zhang, Lifang Wu, Yi Pan, Yingyi Chen, Hanyi Zhuang, Guoqiang Chen, Ting Shi, Jian Zhang:
ODORactor: a web server for deciphering olfactory coding. Bioinform. 27(16): 2302-2303 (2011)
[j4]
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Fei Wang, DongXiang Liu, Heyao Wang, Cheng Luo, Mingyue Zheng, Hong Liu, Weiliang Zhu, Xiaomin Luo, Jian Zhang, Hualiang Jiang:
Computational Screening for Active Compounds Targeting Protein Sequences: Methodology and Experimental Validation. J. Chem. Inf. Model. 51(11): 2821-2828 (2011)
[j3]
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Zhimin Huang, Liang Zhu, Yan Cao, Geng Wu, Xinyi Liu, Yingyi Chen, Qi Wang, Ting Shi, Yaxue Zhao, Yuefei Wang, Weihua Li, Yixue Li, Haifeng Chen, Guoqiang Chen, Jian Zhang:
ASD: a comprehensive database of allosteric proteins and modulators. Nucleic Acids Res. 39(Database-Issue): 663-669 (2011)
2010
[j2]
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Wei Cui, Zhuo Wei, Quan Chen, Yuanhua Cheng, Lingling Geng, Jian Zhang, Jianhua Chen, Tingjun Hou, Mingjuan Ji:
Structure-Based Design of Peptides against G3BP with Cytotoxicity on Tumor Cells. J. Chem. Inf. Model. 50(3): 380-387 (2010)
[j1]
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Yaxue Zhao, Xuefeng Lu, Chao-Yie Yang, Zhimin Huang, Wei Fu, Tingjun Hou, Jian Zhang:
Computational Modeling Toward Understanding Agonist Binding on Dopamine 3. J. Chem. Inf. Model. 50(9): 1633-1643 (2010)

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