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Eberhard O. Voit
Person information
- affiliation: Georgia Institute of Technology, Atlanta GA, USA
- affiliation: Emory University, USA
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2020 – today
- 2023
- [i1]Stephen A. Goss, Robert J. Steininger, Dhruv Narayanan, Daniel V. Olivença, Yutong Sun, Peng Qiu, Jim Amato, Eberhard O. Voit, Walter E. Voit, Eric J. Kildebeck:
Polycraft World AI Lab (PAL): An Extensible Platform for Evaluating Artificial Intelligence Agents. CoRR abs/2301.11891 (2023) - 2022
- [j40]Daniel V. Olivença, Jacob D. Davis, Eberhard O. Voit:
Inference of dynamic interaction networks: A comparison between Lotka-Volterra and multivariate autoregressive models. Frontiers Bioinform. 2 (2022) - 2021
- [j39]Felipe Dalvi-Garcia
, Luís L. Fonseca
A model of dopamine and serotonin-kynurenine metabolism in cortisolemia: Implications for depression. PLoS Comput. Biol. 17(5) (2021) - 2020
- [j38]Itai Dattner
Separable Nonlinear Least-Squares Parameter Estimation for Complex Dynamic Systems. Complex. 2020: 6403641:1-6403641:11 (2020)
2010 – 2019
- 2019
- [j37]Jacob D. Davis
Metrics for regulated biochemical pathway systems. Bioinform. 35(12): 2118-2124 (2019) - [j36]Chad M. Glen, Melissa L. Kemp
Agent-based modeling of morphogenetic systems: Advantages and challenges. PLoS Comput. Biol. 15(3) (2019) - [j35]Eberhard O. Voit
Perspective: Dimensions of the scientific method. PLoS Comput. Biol. 15(9) (2019) - 2017
- [j34]Mojdeh Faraji, Eberhard O. Voit:
Stepwise inference of likely dynamic flux distributions from metabolic time series data. Bioinform. 33(14): 2165-2172 (2017) - [j33]Zhen Qi
Strategies for Comparing Metabolic Profiles: Implications for the Inference of Biochemical Mechanisms from Metabolomics Data. IEEE ACM Trans. Comput. Biol. Bioinform. 14(6): 1434-1445 (2017) - 2015
- [j32]Eberhard O. Voit, Harald A. Martens
150 Years of the Mass Action Law. PLoS Comput. Biol. 11(1) (2015) - [j31]Po-Wei Chen, Luís L. Fonseca
Dynamics of the Heat Stress Response of Ceramides with Different Fatty-Acyl Chain Lengths in Baker's Yeast. PLoS Comput. Biol. 11(8) (2015) - 2014
- [j30]Kansuporn Sriyudthsak, Yuji Sawada, Yukako Chiba
A U-system approach for predicting metabolic behaviors and responses based on an alleged metabolic reaction network. BMC Syst. Biol. 8(S-5): S4 (2014) - [j29]Sepideh Dolatshahi
A constrained wavelet smoother for pathway identification tasks in systems biology. Comput. Chem. Eng. 71: 728-733 (2014) - [j28]Fumihide Shiraishi, Erika Yoshida, Eberhard O. Voit:
An Efficient and Very Accurate Method for Calculating Steady-State Sensitivities in Metabolic Reaction Systems. IEEE ACM Trans. Comput. Biol. Bioinform. 11(6): 1077-1086 (2014) - 2013
- [j27]Weiwei Yin, Eberhard O. Voit:
Function and design of the Nox1 system in vascular smooth muscle cells. BMC Syst. Biol. 7: 20 (2013) - [j26]Po-Wei Chen, Luís L. Fonseca
Coordination of Rapid Sphingolipid Responses to Heat Stress in Yeast. PLoS Comput. Biol. 9(5) (2013) - 2012
- [j25]I-Chun Chou, Eberhard O. Voit:
Estimation of dynamic flux profiles from metabolic time series data. BMC Syst. Biol. 6: 84 (2012) - [j24]Yun Lee, Luis Escamilla-Treviño, Richard A. Dixon, Eberhard O. Voit:
Functional Analysis of Metabolic Channeling and Regulation in Lignin Biosynthesis: A Computational Approach. PLoS Comput. Biol. 8(11) (2012) - 2011
- [j23]Juliet Ndukum, Luís L. Fonseca
Statistical Inference Methods for Sparse Biological Time Series Data. BMC Syst. Biol. 5: 57 (2011) - [j22]Jialiang Wu, Brani Vidakovic, Eberhard O. Voit:
Constructing stochastic models from deterministic process equations by propensity adjustment. BMC Syst. Biol. 5: 187 (2011) - [j21]Yun Lee, Fang Chen, Lina Gallego-Giraldo, Richard A. Dixon, Eberhard O. Voit:
Integrative Analysis of Transgenic Alfalfa (Medicago sativa L.) Suggests New Metabolic Control Mechanisms for Monolignol Biosynthesis. PLoS Comput. Biol. 7(5) (2011) - 2010
- [j20]Zhen Qi, Gary W. Miller, Eberhard O. Voit:
The internal state of medium spiny neurons varies in response to different input signals. BMC Syst. Biol. 4: 26 (2010) - [j19]Jialiang Wu, Zhen Qi, Eberhard O. Voit:
Impact of Delays and Noise on Dopamine Signal Transduction. Silico Biol. 10(1-2): 67-80 (2010) - [j18]Eberhard O. Voit:
The role of systems modeling in drug discovery and predictive health. J. Cheminformatics 2(S-1): 2 (2010)
2000 – 2009
- 2009
- [j17]Chih-Lung Ko, Eberhard O. Voit, Feng-Sheng Wang:
Estimating parameters for generalized mass action models with connectivity information. BMC Bioinform. 10 (2009) - [j16]Marco Vilela, Susana Vinga
Identification of neutral biochemical network models from time series data. BMC Syst. Biol. 3: 47 (2009) - [j15]Jialiang Wu, Eberhard Voit:
Integrative biological systems modeling: challenges and opportunities. Frontiers Comput. Sci. China 3(1): 92-100 (2009) - [j14]Jialiang Wu, Eberhard Voit:
Hybrid Modeling in Biochemical Systems Theory by Means of Functional Petri Nets. J. Bioinform. Comput. Biol. 7(1): 107-134 (2009) - 2008
- [j13]Gautam Goel, I-Chun Chou, Eberhard O. Voit:
System estimation from metabolic time-series data. Bioinform. 24(21): 2505-2511 (2008) - [j12]Marco Vilela, I-Chun Chou, Susana Vinga
Parameter optimization in S-system models. BMC Syst. Biol. 2: 35 (2008) - 2007
- [j11]Marco Vilela, Carlos Cristiano H. Borges, Susana Vinga
Automated smoother for the numerical decoupling of dynamics models. BMC Bioinform. 8 (2007) - 2006
- [j10]Yian Ann Chen
A multivariate prediction model for microarray cross-hybridization. BMC Bioinform. 7: 101 (2006) - [j9]J. M. Muiño, Eberhard O. Voit, Albert Sorribas
GS-distributions: A new family of distributions for continuous unimodal variables. Comput. Stat. Data Anal. 50(10): 2769-2798 (2006) - [j8]Lining Yu, Eberhard O. Voit:
Construction of bivariate S-distributions with copulas. Comput. Stat. Data Anal. 51(3): 1822-1839 (2006) - [j7]Simeone Marino
An Automated Procedure for the Extraction of Metabolic Network Information from Time Series Data. J. Bioinform. Comput. Biol. 4(3): 665-692 (2006) - 2005
- [j6]Raman Lall, Eberhard O. Voit:
Parameter estimation in modulated, unbranched reaction chains within biochemical systems. Comput. Biol. Chem. 29(5): 309-318 (2005) - 2004
- [j5]Eberhard O. Voit, Jonas S. Almeida:
Decoupling dynamical systems for pathway identification from metabolic profiles. Bioinform. 20(11): 1670-1681 (2004) - [j4]Eberhard O. Voit, Simeone Marino, Raman Lall:
Challenges for the identification of biological systems from in vivo time series data. Silico Biol. 5(2): 83-92 (2004) - 2003
- [c2]C. E. Long, Eberhard O. Voit, Edward P. Gatzke:
A mixed integer moving horizon formulation for prioritized objective inferential control of a bioprocess system. ACC 2003: 2365-2370 - 2002
- [j3]Fumihide Shiraishi, Eberhard O. Voit:
Solution of a two-point boundary value model of immobilized enzyme reactions, using an S-system-based root-finding method. Appl. Math. Comput. 127(2-3): 289-310 (2002) - 2000
- [j2]Eberhard O. Voit, Tomas Radivoyevitch
Biochemical systems analysis of genome-wide expression data. Bioinform. 16(11): 1023-1037 (2000) - [j1]Benedict F. Voit, Eberhard O. Voit:
A 7th-grade science project casts doubt on the standard explanation of the Gaussian plume model for seepage through soil. Environ. Model. Softw. 15(5): 497-499 (2000)
1990 – 1999
- 1995
- [c1]Eberhard O. Voit, Néstor V. Torres:
Simulation and Steady-State Optimization of Integrated Biochemical Systems: Theory and Application in Biotechnology. EUROSIM 1995: 939-944
Coauthor Index
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