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BSB 2005: Sao Leopoldo, Brazil
- João C. Setubal, Sergio Verjovski-Almeida
:
Advances in Bioinformatics and Computational Biology, Brazilian Symposium on Bioinformatics, BSB 2005, Sao Leopoldo, Brazil, July 27-29, 2005, Proceedings. Lecture Notes in Computer Science 3594, Springer 2005, ISBN 3-540-28008-1
Invited Papers
- Irene S. Gabashvili
Differential Gene Expression in the Auditory System. 1-8 - Walter L. Ruzzo
Searching for Non-coding RNA. 9-10 - Bruno W. S. Sobral
Cyberinfrastructure for PathoSystems Biology. 11-27 - Joel S. Rozowsky, Paul Bertone, Thomas E. Royce, Sherman Weissman, Michael Snyder, Mark Gerstein:
Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites. 28-29
Full Papers
- R. Nigam, S. Liang:
Perturbing Thermodynamically Unfeasible Metabolic Networks. 30-41 - Ana Carolina Lorena, André Carlos Ponce de Leon Ferreira de Carvalho
Protein Cellular Localization with Multiclass Support Vector Machines and Decision Trees. 42-53 - Eduardo Jaques Spinosa, André Carlos Ponce de Leon Ferreira de Carvalho
Combining One-Class Classifiers for Robust Novelty Detection in Gene Expression Data. 54-64 - Katti Faceli, André Carlos Ponce de Leon Ferreira de Carvalho
Evaluation of the Contents of Partitions Obtained with Clustering Gene Expression Data. 65-76 - Meika I. Monteiro, Marcílio Carlos Pereira de Souto, Luiz M. G. Gonçalves
Machine Learning Techniques for Predicting Bacillus subtilis Promoters. 77-84 - Adriana Neves dos Reis
An Improved Hidden Markov Model Methodology to Discover Prokaryotic Promoters. 85-94 - Marcelo Cezar Pinto, Luciana Foss, José C. M. Mombach, Leila Ribeiro:
Modeling and Property Verification of Lactose Operon Regulation. 95-106 - Guilherme Balestieri Bedin, Ney Lemke:
YAMONES: A Computational Architecture for Molecular Network Simulation. 107-117 - Cláudia Lemelle Fernandes, Diógenes Santiago Santos, Luiz Augusto Basso, Osmar Norberto de Souza
Structure Prediction and Docking Studies of Chorismate Synthase from Mycobacterium Tuberculosis. 118-127 - Georgios Joannis Pappas Jr.
Analysis of the Effects of Multiple Sequence Alignments in Protein Secondary Structure Prediction. 128-140 - Maurício de Alvarenga Mudado, Estevam Bravo-Neto, José Miguel Ortega
Tests of Automatic Annotation Using KOG Proteins and ESTs from 4 Eukariotic Organisms. 141-152 - Francisco Prosdocimi
Diet as a Pressure on the Amino Acid Content of Proteomes. 153-159 - Guilherme P. Telles, Marcelo M. Brigido
A Method for Comparing Three Genomes. 160-169 - Miguel Galves, Zanoni Dias:
Comparison of Genomic DNA to cDNA Alignment Methods. 170-180 - Elaine Ribeiro de Faria, Denise Guliato, Jean Carlo de Sousa Santos:
Segmentation and Centromere Locating Methods Applied to Fish Chromosomes Images. 181-189
Extended Abstracts
- Florencia G. Leonardi
Sequence Motif Identification and Protein Family Classification Using Probabilistic Trees. 190-193 - Fabiano Pazzini, Fernanda Oliveira, Jorge A. Guimarães, Hermes Luís Neubauer de Amorim:
Prediction of Myotoxic and Neurotoxic Activities in Phospholipases A2 from Primary Sequence Analysis. 194-197 - Thiago M. Venancio, Ricardo DeMarco, Katia C. P. Oliveira, Ana Carolina Quirino Simoes, Aline Maria da Silva, Sergio Verjovski-Almeida
Genomics and Gene Expression Management Tools for the Schistosoma Mansoni cDNA Microarray Project. 198-201 - Ana Carolina Quirino Simoes, Aline Maria da Silva, Sergio Verjovski-Almeida
SAM Method as an Approach to Select Candidates for Human Prostate Cancer Markers. 202-205 - Christian Baudet, Zanoni Dias:
New EST Trimming Strategy. 206-209 - Rodrigo de Castro Miranda, Mauricio Ayala-Rincón
A Modification of the Landau-Vishkin Algorithm Computing Longest Common Extensions via Suffix Arrays. 210-213 - Alan Wilter, Carla Osthoff, Cristiane Oliveira, Diego Enry Barreto Gomes
The BioPAUÁ Project: A Portal for Molecular Dynamics Using Grid Environment. 214-217 - Dino Franklin, Ivan da Silva Sendin:
Analysis of Structure Prediction Tools in Mutated MeCP-2. 218-221 - Armando Vieira
Protein Loop Classification Using Artificial Neural Networks. 222-225 - Ricardo M. Czekster, Osmar Norberto de Souza:
VIZ - A Graphical Open-Source Architecture for Use in Structural Bioinformatics. 226-229 - Ana L. C. Bazzan, Cássia Trojahn dos Santos:
Selection of Data Sets of Motifs as Attributes in the Process of Automating the Annotation of Proteins' Keywords. 230-233 - Ardala Breda, Cláudia Lemelle Fernandes, Sabrina Esteves de Matos Almeida, Heitor Moreira Franco, Maria Lúcia Rosa Rossetti, Rosângela Rodrigues, Luís Fernando Brígido, Elizabeth Cortez-Herrera:
Bioinformatics Tools for HIV-1 Identification in Southern Brazilian States. 234-237 - Luciano A. Digiampietri
Fact and Task Oriented System for Genome Assembly and Annotation. 238-241 - João Francisco Valiati, Paulo Martins Engel:
A Clustering Strategy to Find Similarities in Mycoplasma Promoters. 242-245 - Said Sadique Adi, Carlos Eduardo Ferreira:
Gene Prediction by Syntenic Alignment. 246-250 - Ilana de Almeida Souza, Claudiney Sanches Jr., André Luiz Miranda da Rosa, Patrícia Trautenmüller, Thiago Tognoli Lopes, Marcelo Knörich Zuffo
Real Time Immersive Visualization and Manipulation of the Visible Human Data Set. 251-256
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