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James A. Foster
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2020 – today
- 2022
- [j23]Tayo Obafemi-Ajayi
, Andy D. Perkins, Bindu Nanduri, Donald C. Wunsch II, James A. Foster, Joan Peckham:
No-boundary thinking: a viable solution to ethical data-driven AI in precision medicine. AI Ethics 2(4): 635-643 (2022) - 2021
- [c36]Gerard Kian-Meng Goh, A. Keith Dunker, James A. Foster, Vladimir N. Uversky:
Feasibility of the vaccine development for SARS-CoV-2 and other viruses using the shell disorder analysis. PSB 2021
2010 – 2019
- 2017
- [j22]James A. Foster:
Taking "biology" just seriously enough: Commentary on "On the Mapping of Genotype to Phenotype in Evolutionary Algorithms" by Peter A. Whigham, Grant Dick, and James Maclaurin. Genet. Program. Evolvable Mach. 18(3): 395-398 (2017) - [c35]Ilya Y. Zhbannikov, Samuel S. Hunter, James A. Foster, Matthew L. Settles:
SeqyClean: A Pipeline for High-throughput Sequence Data Preprocessing. BCB 2017: 407-416 - 2016
- [j21]Wolfgang Banzhaf, Bert Baumgaertner
Defining and simulating open-ended novelty: requirements, guidelines, and challenges. Theory Biosci. 135(3): 131-161 (2016) - [c34]Casey S. Greene, James A. Foster, Bruce A. Stanton, Deborah A. Hogan, Yana Bromberg:
Computational Approaches to Study Microbes and Microbiomes. PSB 2016: 557-565 - 2015
- [j20]Daniel Beck, James A. Foster:
Machine learning classifiers provide insight into the relationship between microbial communities and bacterial vaginosis. BioData Min. 8: 23 (2015) - [j19]Daniel Beck, Christopher Dennis, James A. Foster
Seed: a user-friendly tool for exploring and visualizing microbial community data. Bioinform. 31(4): 602-603 (2015) - [j18]Ilya Y. Zhbannikov, James A. Foster:
MetAmp: combining amplicon data from multiple markers for OTU analysis. Bioinform. 31(11): 1830-1832 (2015) - 2014
- [c33]Yolanda S. Baker, Rajeev Agrawal, James A. Foster, Daniel Beck, Gerry V. Dozier:
Detecting bacterial vaginosis using machine learning. ACM Southeast Regional Conference 2014: 46:1-46:4 - [c32]Joi Carter, Daniel Beck, Henry Williams, Gerry V. Dozier, James A. Foster
GA-based selection of vaginal microbiome features associated with bacterial vaginosis. GECCO 2014: 265-268 - [c31]Yolanda S. Baker, Rajeev Agrawal, James A. Foster
Applying machine learning techniques in detecting Bacterial Vaginosis. ICMLC 2014: 241-246 - [c30]Kristine A. Pattin, Anna C. Greene, Russ B. Altman, Lawrence E. Hunter, David A. Ross, James A. Foster, Jason H. Moore:
Building the Next Generation of Quantitative Biologists. Pacific Symposium on Biocomputing 2014: 417-421 - 2013
- [j17]James A. Foster
Introduction to special section: Best of EuroGP/EvoBio. Genet. Program. Evolvable Mach. 14(4): 429-430 (2013) - [c29]Ilya Y. Zhbannikov, Joseph W. Brown, James A. Foster
decisivatoR: an R infrastructure package that addresses the problem of phylogenetic decisiveness. BCB 2013: 716 - 2012
- [j16]James A. Foster
Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life. Briefings Bioinform. 13(4): 420-429 (2012) - [j15]John Bunge, Linda Woodard, Dankmar Böhning
Estimating population diversity with CatchAll. Bioinform. 28(7): 1045-1047 (2012) - [j14]Wade K. Copeland, Vandhana Krishnan, Daniel Beck, Matt Settles
mcaGUI: microbial community analysis R-Graphical User Interface (GUI). Bioinform. 28(16): 2198-2199 (2012) - [j13]Sara Silva
Guest editorial: special issue on selected papers from the European conference on genetic programming. Genet. Program. Evolvable Mach. 13(3): 271-273 (2012) - [c28]James A. Foster, Jason H. Moore, Jack A. Gilbert, John Bunge:
Session introduction. Pacific Symposium on Biocomputing 2012: 200-202 - [c27]John Bunge, Dankmar Böhning, Heather K. Allen, James A. Foster:
Estimating Population Diversity with Unreliable Low Frequency Counts. Pacific Symposium on Biocomputing 2012: 203-212 - 2011
- [j12]Daniel Beck, Matt Settles
OTUbase: an R infrastructure package for operational taxonomic unit data. Bioinform. 27(12): 1700-1701 (2011) - [j11]Vic Norris
Computing with bacterial constituents, cells and populations: from bioputing to bactoputing. Theory Biosci. 130(3): 211-228 (2011) - [c26]James A. Foster, Jason H. Moore:
Session Introduction. Pacific Symposium on Biocomputing 2011: 118-120 - [e6]Sara Silva, James A. Foster, Miguel Nicolau, Penousal Machado, Mario Giacobini
Genetic Programming - 14th European Conference, EuroGP 2011, Torino, Italy, April 27-29, 2011. Proceedings. Lecture Notes in Computer Science 6621, Springer 2011, ISBN 978-3-642-20406-7 [contents]
2000 – 2009
- 2006
- [j10]Luke Sheneman, Jason Evans, James A. Foster
Clearcut: a fast implementation of relaxed neighbor joining. Bioinform. 22(22): 2823-2824 (2006) - [c25]Luke Sheneman, James A. Foster:
Estimating the destructiveness of crossover on binary tree representations. GECCO 2006: 1427-1428 - 2005
- [j9]James A. Foster, Erick Cantú-Paz:
Introduction. Genet. Program. Evolvable Mach. 6(1): 5-6 (2005) - 2004
- [j8]Wolfgang Banzhaf
Editorial Introduction. Genet. Program. Evolvable Mach. 5(2): 119-120 (2004) - [j7]Conrad Shyu, Luke Sheneman, James A. Foster
Multiple Sequence Alignment with Evolutionary Computation. Genet. Program. Evolvable Mach. 5(2): 121-144 (2004) - [c24]Michael L. Harrison, James A. Foster
Improving the Survivability of a Simple Evolved Circuit through Co-evolution. Evolvable Hardware 2004: 123-129 - [c23]Michael L. Harrison, James A. Foster:
Co-evolving Faults to Improve the Fault Tolerance of Sorting Networks. EuroGP 2004: 57-66 - [c22]Luke Sheneman, James A. Foster:
Evolving Better Multiple Sequence Alignments. GECCO (1) 2004: 449-460 - [e5]Kalyanmoy Deb, Riccardo Poli, Wolfgang Banzhaf, Hans-Georg Beyer, Edmund K. Burke, Paul J. Darwen, Dipankar Dasgupta, Dario Floreano, James A. Foster, Mark Harman, Owen Holland, Pier Luca Lanzi, Lee Spector, Andrea Tettamanzi, Dirk Thierens, Andrew M. Tyrrell:
Genetic and Evolutionary Computation - GECCO 2004, Genetic and Evolutionary Computation Conference, Seattle, WA, USA, June 26-30, 2004, Proceedings, Part I. Lecture Notes in Computer Science 3102, Springer 2004, ISBN 3-540-22344-4 [contents] - [e4]Kalyanmoy Deb, Riccardo Poli, Wolfgang Banzhaf, Hans-Georg Beyer, Edmund K. Burke, Paul J. Darwen, Dipankar Dasgupta, Dario Floreano, James A. Foster, Mark Harman, Owen Holland, Pier Luca Lanzi, Lee Spector, Andrea Tettamanzi, Dirk Thierens, Andrew M. Tyrrell:
Genetic and Evolutionary Computation - GECCO 2004, Genetic and Evolutionary Computation Conference, Seattle, WA, USA, June 26-30, 2004, Proceedings, Part II. Lecture Notes in Computer Science 3103, Springer 2004, ISBN 3-540-22343-6 [contents] - 2003
- [j6]Kosuke Imamura, Terence Soule, Robert B. Heckendorn, James A. Foster
Behavioral Diversity and a Probabilistically Optimal GP Ensemble. Genet. Program. Evolvable Mach. 4(3): 235-253 (2003) - [c21]Rob Shepherd, James A. Foster:
Inherent Fault Tolerance in Evolved Sorting Networks. GECCO 2003: 456-457 - [c20]Conrad Shyu, James A. Foster:
Evolving Consensus Sequence for Multiple Sequence Alignment with a Genetic Algorithm. GECCO 2003: 2313-2324 - [e3]Erick Cantú-Paz, James A. Foster, Kalyanmoy Deb, Lawrence Davis, Rajkumar Roy, Una-May O'Reilly, Hans-Georg Beyer, Russell K. Standish
Genetic and Evolutionary Computation - GECCO 2003, Genetic and Evolutionary Computation Conference, Chicago, IL, USA, July 12-16, 2003. Proceedings, Part I. Lecture Notes in Computer Science 2723, Springer 2003, ISBN 3-540-40602-6 [contents] - [e2]Erick Cantú-Paz, James A. Foster, Kalyanmoy Deb, Lawrence Davis, Rajkumar Roy, Una-May O'Reilly, Hans-Georg Beyer, Russell K. Standish
Genetic and Evolutionary Computation - GECCO 2003, Genetic and Evolutionary Computation Conference, Chicago, IL, USA, July 12-16, 2003. Proceedings, Part II. Lecture Notes in Computer Science 2724, Springer 2003, ISBN 3-540-40603-4 [contents] - 2002
- [c19]Conrad Shyu, James A. Foster, Larry J. Forney:
Electronic Polymerase Chain Reaction (EPCR) Search Algorithm. CSB 2002: 338 - [c18]Conrad Shyu, James A. Foster, K. X. Liao, S. J. Bent, K. Sale, Larry J. Forney, Terence Soule:
MiCA: Web-Based Computational Tools for the Analysis of Microbial Community Structure and Compisition Based on T-RFLP of 16S rRNA Gene. CSB 2002: 341 - [c17]Kosuke Imamura, Robert B. Heckendorn, Terence Soule, James A. Foster:
N-Version Genetic Programming via Fault Masking. EuroGP 2002: 172-181 - [c16]Mark M. Meysenburg, Daniel Hoelting, Duane McElvain, James A. Foster:
How Random Generator Quality Impacts GA Performance. GECCO 2002: 480-487 - [c15]Mark M. Meysenburg, Daniel Hoelting, Duane McElvain, James A. Foster:
A Genetic Algorithm-specific Test Of Random Generator Quality. GECCO 2002: 691 - [c14]Kosuke Imamura, Robert B. Heckendorn, Terence Soule, James A. Foster:
Abstention Reduces Errors - decision Abstaining N-version Genetic Programming. GECCO 2002: 796-803 - [e1]James A. Foster, Evelyne Lutton, Julian F. Miller, Conor Ryan, Andrea Tettamanzi:
Genetic Programming, 5th European Conference, EuroGP 2002, Kinsale, Ireland, April 3-5, 2002, Proceedings. Lecture Notes in Computer Science 2278, Springer 2002, ISBN 3-540-43378-3 [contents] - 2001
- [j5]James A. Foster:
Review: Discipulus: A Commercial Genetic Programming System. Genet. Program. Evolvable Mach. 2(2): 201-203 (2001) - [c13]Bart Rylander, Terence Soule, James A. Foster:
Computational Complexity, Genetic Programming, and Implications. EuroGP 2001: 348-360 - 2000
- [j4]Hunter S. Snevily, James A. Foster:
The 2-Pebbling Property and a Conjecture of Graham's. Graphs Comb. 16(2): 231-244 (2000) - [c12]Kosuke Imamura, James A. Foster, Axel W. Krings:
The Test Vector Problem and Limitations to Evolving Digital Circuits. Evolvable Hardware 2000: 75-80 - [c11]Jason Masner, John Cavalieri, James F. Frenzel, James A. Foster:
Size versus Robustness in Evolved Sorting Networks: Is Bigger Better? Evolvable Hardware 2000: 81-90 - [c10]Joe Dumoulin, James A. Foster, James F. Frenzel, Steve McGrew:
Special Purpose Image Convolution with Evolvable Hardware. EvoWorkshops 2000: 1-11 - [c9]Gerard Kian-Meng Goh, James A. Foster:
Evolving Molecules for Drug Design Using Genetic Algorithms via Molecular Trees. GECCO 2000: 27-33 - [c8]Bart Rylander, James A. Foster:
GA Hard Problems. GECCO 2000: 367 - [c7]Bart Rylander, Terence Soule, James A. Foster, Jim Alves-Foss:
Quantum Genetic Algorithms. GECCO 2000: 373
1990 – 1999
- 1999
- [c6]John Determan, James A. Foster
Using chaos in genetic algorithms. CEC 1999: 2094-2101 - [c5]Jason Masner, John Cavalieri, James F. Frenzel, James A. Foster:
Representation and Robustness for Evolved Sorting Networks. Evolvable Hardware 1999: 255-261 - [c4]Brad Harvey, James A. Foster, Deborah A. Frincke:
Towards Byte Code Genetic Programming. GECCO 1999: 1234 - 1998
- [j3]Terence Soule, James A. Foster:
Effects of Code Growth and Parsimony Pressure on Populations in Genetic Programming. Evol. Comput. 6(4): 293-309 (1998) - 1997
- [c3]Terence Soule, James A. Foster:
Genetic Algorithm Hardness Measures Applied to the Maximum Clique Problem. ICGA 1997: 81-88 - [c2]Mark M. Meysenburg, James A. Foster:
The Quality of Pseudo-Random Number Generations and Simple Genetic Algorithm Performance. ICGA 1997: 276-282 - 1995
- [j2]James A. Foster, Michael Barnett, Karen Van Houten, Luke Sheneman:
(In)Formal Methods: Teaching Program Derivation Via the Moore Method. Comput. Sci. Educ. 6(1): 67-91 (1995) - 1993
- [j1]James A. Foster
The Generic Oracle Hypothesis is False. Inf. Process. Lett. 45(2): 59-62 (1993) - 1992
- [c1]James A. Foster:
The Generic Oracle Hypothesis Fails. ICCI 1992: 75-78
Coauthor Index
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