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G. Thomas Hayman
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2020 – today
- 2021
- [j19]Seth Carbon, Eric Douglass, Benjamin M. Good, Deepak R. Unni
, Nomi L. Harris
The Gene Ontology resource: enriching a GOld mine. Nucleic Acids Res. 49(Database-Issue): D325-D334 (2021) - 2020
- [j18]Jennifer R. Smith
The Year of the Rat: The Rat Genome Database at 20: a multi-species knowledgebase and analysis platform. Nucleic Acids Res. 48(Database-Issue): D731-D742 (2020) - [c3]Cagatay Dursun
NECo: A node embedding algorithm for multiplex heterogeneous networks. BIBM 2020: 146-149
2010 – 2019
- 2019
- [j17]Shur-Jen Wang, Stanley J. F. Laulederkind, Yiqing Zhao
Integrated curation and data mining for disease and phenotype models at the Rat Genome Database. Database J. Biol. Databases Curation 2019: baz014 (2019) - [j16]Lucy Lu Wang
Predicting instances of pathway ontology classes for pathway integration. J. Biomed. Semant. 10(1): 11:1-11:11 (2019) - 2018
- [c2]Stanley J. F. Laulederkind, G. Thomas Hayman, Shur-Jen Wang, Elizabeth R. Bolton, Jennifer R. Smith, Marek Tutaj, Jeff de Pons, Mary Shimoyama, Melinda R. Dwinell:
Adapting Disease Vocabularies for Curation at the Rat Genome Database. ICBO 2018 - 2016
- [j15]G. Thomas Hayman, Stanley J. F. Laulederkind, Jennifer R. Smith, Shur-Jen Wang, Victoria Petri, Rajni Nigam, Marek Tutaj, Jeff de Pons, Melinda R. Dwinell, Mary Shimoyama:
The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database. Database J. Biol. Databases Curation 2016 (2016) - [c1]Mary Shimoyama, Stanley J. F. Laulederkind, Jeff de Pons, Marek Tutaj, Victoria Petri, G. Thomas Hayman, Shur-Jen Wang, Rajni Nigam, Jennifer R. Smith, Jyothi Thota, Omid Ghiasvand, Melinda R. Dwinell:
Disease Connections at RGD. AMIA 2016 - 2015
- [j14]Weisong Liu, Stanley J. F. Laulederkind, G. Thomas Hayman, Shur-Jen Wang, Rajni Nigam, Jennifer R. Smith, Jeff de Pons, Melinda R. Dwinell, Mary Shimoyama:
OntoMate: a text-mining tool aiding curation at the Rat Genome Database. Database J. Biol. Databases Curation 2015 (2015) - [j13]Shur-Jen Wang, Stanley J. F. Laulederkind, G. Thomas Hayman, Victoria Petri, Weisong Liu, Jennifer R. Smith, Rajni Nigam, Melinda R. Dwinell, Mary Shimoyama:
PhenoMiner: a quantitative phenotype database for the laboratory rat, Rattus norvegicus. Application in hypertension and renal disease. Database J. Biol. Databases Curation 2015 (2015) - [j12]Mary Shimoyama, Jeff de Pons, G. Thomas Hayman, Stanley J. F. Laulederkind, Weisong Liu, Rajni Nigam, Victoria Petri, Jennifer R. Smith, Marek Tutaj, Shur-Jen Wang, Elizabeth A. Worthey, Melinda R. Dwinell, Howard J. Jacob:
The Rat Genome Database 2015: genomic, phenotypic and environmental variations and disease. Nucleic Acids Res. 43(Database-Issue): 743-750 (2015) - 2014
- [j11]Kimberly Van Auken, Mary L. Schaeffer, Peter McQuilton
BC4GO: a full-text corpus for the BioCreative IV GO task. Database J. Biol. Databases Curation 2014 (2014) - [j10]Yuqing Mao
Overview of the gene ontology task at BioCreative IV. Database J. Biol. Databases Curation 2014 (2014) - [j9]Victoria Petri, Pushkala Jayaraman
The pathway ontology - updates and applications. J. Biomed. Semant. 5: 7 (2014) - 2013
- [j8]Stanley J. F. Laulederkind, G. Thomas Hayman, Shur-Jen Wang, Jennifer R. Smith, Timothy Lowry, Rajni Nigam, Victoria Petri, Jeff de Pons, Melinda R. Dwinell, Mary Shimoyama, Diane H. Munzenmaier, Elizabeth A. Worthey, Howard J. Jacob:
The Rat Genome Database 2013 - data, tools and users. Briefings Bioinform. 14(4): 520-526 (2013) - [j7]Stanley J. F. Laulederkind, Weisong Liu, Jennifer R. Smith, G. Thomas Hayman, Shur-Jen Wang, Rajni Nigam, Victoria Petri, Timothy Lowry, Jeff de Pons, Melinda R. Dwinell, Mary Shimoyama:
PhenoMiner: quantitative phenotype curation at the rat genome database. Database J. Biol. Databases Curation 2013 (2013) - [j6]Shur-Jen Wang, Stanley J. F. Laulederkind, G. Thomas Hayman, Jennifer R. Smith, Victoria Petri, Timothy Lowry, Rajni Nigam, Melinda R. Dwinell, Elizabeth A. Worthey, Diane H. Munzenmaier, Mary Shimoyama, Howard J. Jacob:
Analysis of disease-associated objects at the Rat Genome Database. Database J. Biol. Databases Curation 2013 (2013) - [j5]Jennifer R. Smith, Carissa A. Park, Rajni Nigam, Stanley J. F. Laulederkind, G. Thomas Hayman, Shur-Jen Wang, Timothy Lowry, Victoria Petri, Jeff de Pons, Marek Tutaj, Weisong Liu, Elizabeth A. Worthey, Mary Shimoyama, Melinda R. Dwinell:
The clinical measurement, measurement method and experimental condition ontologies: expansion, improvements and new applications. J. Biomed. Semant. 4: 26 (2013) - 2012
- [j4]Stanley J. F. Laulederkind, Marek Tutaj, Mary Shimoyama, G. Thomas Hayman, Timothy Lowry, Rajni Nigam, Victoria Petri, Jennifer R. Smith, Shur-Jen Wang, Jeff de Pons, Melinda R. Dwinell, Howard J. Jacob:
Ontology searching and browsing at the Rat Genome Database. Database J. Biol. Databases Curation 2012 (2012) - 2011
- [j3]Stanley J. F. Laulederkind, Mary Shimoyama, G. Thomas Hayman, Timothy Lowry, Rajni Nigam, Victoria Petri, Jennifer R. Smith, Shur-Jen Wang, Jeff de Pons, George Kowalski, Weisong Liu, Wes Rood, Diane H. Munzenmaier, Melinda R. Dwinell, Simon N. Twigger
The Rat Genome Database curation tool suite: a set of optimized software tools enabling efficient acquisition, organization, and presentation of biological data. Database J. Biol. Databases Curation 2011 (2011) - [j2]Victoria Petri, Mary Shimoyama, G. Thomas Hayman, Jennifer R. Smith, Marek Tutaj, Jeff de Pons, Melinda R. Dwinell, Diane H. Munzenmaier, Simon N. Twigger
The Rat Genome Database Pathway Portal. Database J. Biol. Databases Curation 2011 (2011)
2000 – 2009
- 2009
- [j1]Mary Shimoyama, G. Thomas Hayman, Stanley J. F. Laulederkind, Rajni Nigam, Timothy Lowry, Victoria Petri, Jennifer R. Smith, Shur-Jen Wang, Diane H. Munzenmaier, Melinda R. Dwinell, Simon N. Twigger
The Rat Genome Database Curators: Who, What, Where, Why. PLoS Comput. Biol. 5(11) (2009)
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