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Pablo A. Moreno
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2020 – today
- 2022
- [j14]Pablo A. Moreno
, Silvie Fexova, Nancy George, Jonathan R. Manning
Expression Atlas update: gene and protein expression in multiple species. Nucleic Acids Res. 50(D1): 129-140 (2022) - [j13]Enis Afgan, Anton Nekrutenko, Björn A. Grüning, Daniel J. Blankenberg, Jeremy Goecks, Michael C. Schatz, Alexander E. Ostrovsky, Alexandru Mahmoud, Andrew J. Lonie, Anna Syme, Anne Fouilloux, Anthony Bretaudeau, Anup Kumar, Arthur C. Eschenlauer, Assunta D. Desanto, Aysam Guerler, Beatriz Serrano-Solano, Bérénice Batut, Bradley W. Langhorst, Bridget Carr, Bryan A. Raubenolt, Cameron J. Hyde, Catherine J. Bromhead, Christopher B. Barnett, Coline Royaux, Cristóbal Gallardo, Daniel J. Fornika, Dannon Baker, Dave Bouvier, Dave Clements, David A. de Lima Morais, David Lopez Tabernero, Delphine Larivière, Engy Nasr, Federico Zambelli, Florian Heyl, Fotis E. Psomopoulos, Frederik Coppens, Gareth R. Price, Gianmauro Cuccuru, Gildas Le Corguillé, Gregory Von Kuster, Gulsum Gudukbay, Helena Rasche, Hans-Rudolf Hotz, Ignacio Eguinoa, Igor V. Makunin, Isuru Ranawaka, James Taylor, Jayadev Joshi, Jennifer Hillman-Jackson, John Chilton, Kaivan Kamali, Keith Suderman, Krzysztof Poterlowicz, Yvan Le Bras, Lucille Lopez-Delisle, Luke Sargent, Madeline E. Bassetti, Marco Antonio Tangaro, Marius van den Beek, Martin Cech, Matthias Bernt, Matthias Fahrner, Mehmet Tekman, Melanie Christine Föll, Michael R. Crusoe, Miguel Roncoroni, Natalie Kucher, Nate Coraor, Nicholas Stoler, Nick Rhodes, Nicola Soranzo, Niko Pinter, Nuwan Goonasekera, Pablo A. Moreno, Pavankumar Videm, Petera Melanie, Pietro Mandreoli, Pratik D. Jagtap, Qiang Gu, Ralf J. M. Weber, Ross Lazarus, Ruben H. P. Vorderman, Saskia D. Hiltemann, Sergey Golitsynskiy, Shilpa Garg, Simon A. Bray, Simon L. Gladman, Simone Leo, Subina P. Mehta, Timothy J. Griffin, Vahid Jalili, Yves Vandenbrouck, Victor Wen, Vijay K. Nagampalli, Wendi A. Bacon, Willem L. De Koning, Wolfgang Maier, Peter J. Briggs:
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update. Nucleic Acids Res. 50(W1): 345-351 (2022) - [j12]Shengbo Wang
Integrated view and comparative analysis of baseline protein expression in mouse and rat tissues. PLoS Comput. Biol. 18(6) (2022) - 2021
- [j11]Matthew L. Speir
UCSC Cell Browser: visualize your single-cell data. Bioinform. 37(23): 4578-4580 (2021) - [i3]Ola Spjuth
Approaches for containerized scientific workflows in cloud environments with applications in life science. F1000Research 10: 513 (2021) - 2020
- [j10]Irene Papatheodorou
Expression Atlas update: from tissues to single cells. Nucleic Acids Res. 48(Database-Issue): D77-D83 (2020)
2010 – 2019
- 2019
- [j9]Payam Emami Khoonsari, Pablo A. Moreno
Interoperable and scalable data analysis with microservices: applications in metabolomics. Bioinform. 35(19): 3752-3760 (2019) - [j8]Carles Foguet
p13CMFA: Parsimonious 13C metabolic flux analysis. PLoS Comput. Biol. 15(9) (2019) - [i2]Jianliang Gao, Noureddin Sadawi, Ibrahim Karaman, Jake T. M. Pearce, Pablo A. Moreno, Anders Larsson, Marco Capuccini, Paul Elliott, Jeremy K. Nicholson, Timothy M. D. Ebbels, Robert C. Glen:
Metabolomics in the Cloud: Scaling Computational Tools to Big Data. CoRR abs/1904.02288 (2019) - 2018
- [i1]Björn A. Grüning, Olivier Sallou, Pablo A. Moreno, Felipe da Veiga Leprevost, Hervé Ménager, Dan Søndergaard, Hannes L. Röst, Timo Sachsenberg, Brian O'Connor, Fábio Madeira, Victoria Dominguez Del Angel, Michael R. Crusoe, Susheel Varma, Daniel J. Blankenberg, Rafael C. Jiménez, Daniel Blankenberg, Yasset Pérez-Riverol:
Recommendations for the packaging and containerizing of bioinformatics software. F1000Research 7: 742 (2018) - 2017
- [j7]Felipe da Veiga Leprevost
BioContainers: an open-source and community-driven framework for software standardization. Bioinform. 33(16): 2580-2582 (2017) - [j6]Martin Larralde
mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data. Bioinform. 33(16): 2598-2600 (2017) - 2015
- [j5]Pablo A. Moreno
BiNChE: A web tool and library for chemical enrichment analysis based on the ChEBI ontology. BMC Bioinform. 16: 56:1-56:7 (2015) - 2013
- [j4]Janna Hastings, Pablo Conesa, Adriano Dekker, Marcus Ennis, Kenneth Haug, Kalai Vanii Jayaseelan, Namrata Kale, Tejasvi Mahendraker, Pablo A. Moreno, Venkatesh Muthukrishnan, Gareth I. Owen, Reza M. Salek, Steve Turner, Christoph Steinbeck:
Expanding natural product chemistry resources at the EBI. J. Cheminformatics 5(S-1): 43 (2013) - 2012
- [j3]Kalai Vanii
Natural product-likeness score revisited: an open-source, open-data implementation. BMC Bioinform. 13: 106 (2012) - 2011
- [j2]Christoph Steinbeck, Stefan Kuhn
Computational metabolomics - a field at the boundaries of cheminformatics and bioinformatics. J. Cheminformatics 3(S-1): 6 (2011) - [j1]Pablo A. Moreno, Kalai Vanii Jayaseelan, Christoph Steinbeck:
Towards automated metabolome assembly: application of text mining to correlate small molecules, targets and tissues. J. Cheminformatics 3(S-1): 19 (2011)
2000 – 2009
- 2009
- [c1]Nico Adams, Paula de Matos, Adriano Dekker, Marcus Ennis, Janna Hastings, Kenneth Haug, Duncan Hull, Zara Josephs, Pablo A. Moreno, Steve Turner, Christoph Steinbeck:
Semantic access to chemistry data with the ChEBI ontology and web services. SWAT4LS 2009
Coauthor Index
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