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Dario Greco

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2020 – today

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2022
[j21]
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Angela Serra, Michele Fratello, Antonio Federico, Ravi Ojha, Riccardo Provenzani, Ervin Tasnádi, Luca Cattelani, Giusy del Giudice, Pia Anneli Sofia Kinaret, Laura Aliisa Saarimäki, Alisa Pavel, Suvi Kuivanen, Vincenzo Cerullo, Olli Vapalahti, Peter Horváth, Antonio Di Lieto, Jari Yli-Kauhaluoma, Giuseppe Balistreri, Dario Greco:
Computationally prioritized drugs inhibit SARS-CoV-2 infection and syncytia formation. Briefings Bioinform. 23(1) (2022)
2021
[j20]
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Alisa Pavel, Giusy del Giudice, Antonio Federico, Antonio Di Lieto, Pia Anneli Sofia Kinaret, Angela Serra, Dario Greco:
Integrated network analysis reveals new genes suggesting COVID-19 chronic effects and treatment. Briefings Bioinform. 22(2): 1430-1441 (2021)
[j19]
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Teemu J. Rintala, Antonio Federico, Leena Latonen, Dario Greco, Vittorio Fortino:
A systematic comparison of data- and knowledge-driven approaches to disease subtype discovery. Briefings Bioinform. 22(6) (2021)
[j18]
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Alisa Pavel, Antonio Federico, Giusy del Giudice, Angela Serra, Dario Greco:
VOLTA: adVanced mOLecular neTwork Analysis. Bioinform. 37(23): 4587-4588 (2021)
[j17]
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Dawit A. Yohannes, Katri Kaukinen, Kalle Kurppa, Päivi Saavalainen, Dario Greco:
Clustering based approach for population level identification of condition-associated T-cell receptor β-chain CDR3 sequences. BMC Bioinform. 22(1): 159 (2021)
[j16]
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Giovanni Scala, Antonio Federico, Dario Greco:
CpGmotifs: a tool to discover DNA motifs associated to CpG methylation events. BMC Bioinform. 22(1): 278 (2021)
2020
[j15]
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Angela Serra, Serli Önlü, Paola Festa, Vittorio Fortino, Dario Greco:
MaNGA: a novel multi-niche multi-objective genetic algorithm for QSAR modelling. Bioinform. 36(1): 145-153 (2020)
[j14]
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Angela Serra, Laura Aliisa Saarimäki, Michele Fratello, Veer Singh Marwah, Dario Greco:
BMDx: a graphical Shiny application to perform Benchmark Dose analysis for transcriptomics data. Bioinform. 36(9): 2932-2933 (2020)
[j13]
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Vittorio Fortino, Giovanni Scala, Dario Greco:
Feature set optimization in biomarker discovery from genome-scale data. Bioinform. 36(11): 3393-3400 (2020)

2010 – 2019

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2019
[j12]
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Giovanni Scala, Angela Serra, Veer Singh Marwah, Laura Aliisa Saarimäki, Dario Greco:
FunMappOne: a tool to hierarchically organize and visually navigate functional gene annotations in multiple experiments. BMC Bioinform. 20(1): 79:1-79:7 (2019)
[j11]
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Angela Serra, Serli Önlü, Pietro Coretto, Dario Greco:
An integrated quantitative structure and mechanism of action-activity relationship model of human serum albumin binding. J. Cheminformatics 11(1): 38:1-38:10 (2019)
[j10]
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Veer Singh Marwah, Giovanni Scala, Pia Anneli Sofia Kinaret, Angela Serra, Harri Alenius, Vittorio Fortino, Dario Greco:
eUTOPIA: solUTion for Omics data PreprocessIng and Analysis. Source Code Biol. Medicine 14(1) (2019)
2018
[j9]
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  - journals/bioinformatics/MarwahKSSLFG18
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Veer Singh Marwah, Pia Anneli Sofia Kinaret, Angela Serra, Giovanni Scala, Antti Lauerma, Vittorio Fortino, Dario Greco:
INfORM: Inference of NetwOrk Response Modules. Bioinform. 34(12): 2136-2138 (2018)
[j8]
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  - journals/bmcbi/OghabianGF18
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Ali Oghabian, Dario Greco, Mikko J. Frilander:
IntEREst: intron-exon retention estimator. BMC Bioinform. 19(1): 130:1-130:10 (2018)
2016
[j7]
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Vittorio Fortino, Roberto Tagliaferri, Dario Greco:
CONDOP: an R package for CONdition-Dependent Operon Predictions. Bioinform. 32(20): 3199-3200 (2016)
[c4]
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  - conf/cec/MaioPFG16
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Carmen De Maio, Mimmo Parente, Giuseppe Fenza, Dario Greco:
Time aware knowledge extraction to analyze nanosafety cluster scientific activities. CEC 2016: 1233-1240
[c3]
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Angela Serra, Michele Fratello, Dario Greco, Roberto Tagliaferri:
Data integration in genomics and systems biology. CEC 2016: 1272-1279
[c2]
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Paola Galdi, Angela Serra, Dario Greco, Roberto Tagliaferri:
Effectiveness of projection techniques in genomic data analysis. RTSI 2016: 1-6
2015
[j6]
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Vittorio Fortino, Harri Alenius, Dario Greco:
BACA: bubble chArt to compare annotations. BMC Bioinform. 16: 37:1-37:5 (2015)
[j5]
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Michele Fratello, Angela Serra, Vittorio Fortino, Giancarlo Raiconi, Roberto Tagliaferri, Dario Greco:
A multi-view genomic data simulator. BMC Bioinform. 16: 151:1-151:15 (2015)
[j4]
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Angela Serra, Michele Fratello, Vittorio Fortino, Giancarlo Raiconi, Roberto Tagliaferri, Dario Greco:
MVDA: a multi-view genomic data integration methodology. BMC Bioinform. 16: 261:1-261:13 (2015)
[c1]
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Angela Serra, Dario Greco, Roberto Tagliaferri:
Impact of different metrics on multi-view clustering. IJCNN 2015: 1-8
2014
[j3]
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Vittorio Fortino, Olli-Pekka Smolander, Petri Auvinen, Roberto Tagliaferri, Dario Greco:
Transcriptome dynamics-based operon prediction in prokaryotes. BMC Bioinform. 15: 145 (2014)
2013
[j2]
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  - journals/jcheminf/NapolitanoZMTKDG13
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Francesco Napolitano, Yan Zhao, Vania M. Moreira, Roberto Tagliaferri, Juha Kere, Mauro D'Amato, Dario Greco:
Drug Repositioning: A Machine-Learning Approach through Data Integration. J. Cheminformatics 5: 30 (2013)
2010
[j1]
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  - journals/bmcbi/GuptaGAA10
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Rashi Gupta, Dario Greco, Petri Auvinen, Elja Arjas:
Bayesian integrated modeling of expression data: a case study on RhoG. BMC Bioinform. 11: 295 (2010)

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