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Louis J. Vaickus
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2020 – today
- 2024
- [j2]Michael Y. Fatemi, Yunrui Lu, Alos Diallo
, Gokul Srinivasan, Zarif L. Azher, Brock C. Christensen, Lucas A. Salas
An initial game-theoretic assessment of enhanced tissue preparation and imaging protocols for improved deep learning inference of spatial transcriptomics from tissue morphology. Briefings Bioinform. 25(6) (2024) - 2023
- [j1]Zarif L. Azher, Anish Suvarna, Ji-Qing Chen, Ze Zhang
Assessment of emerging pretraining strategies in interpretable multimodal deep learning for cancer prognostication. BioData Min. 16(1) (2023) - 2022
- [c9]Ramya Reddy, Ram Reddy, Cyril Sharma, Christopher R. Jackson, Scott Palisoul, Rachael Barney, Fred Kolling, Lucas A. Salas, Brock C. Christensen, Gabriel Brooks, Gregory Tsongalis, Louis J. Vaickus, Joshua J. Levy:
Graph Neural Networks Ameliorate Potential Impacts of Imprecise Large-Scale Autonomous Immunofluorescence Labeling of Immune Cells on Whole Slide Images. GeoMedIA 2022: 15-33 - [c8]Christian Haudenschild, Louis J. Vaickus, Joshua J. Levy:
Configuring a federated network of real-world patient health data for multimodal deep learning prediction of health outcomes. SAC 2022: 627-635 - [c7]Zarif L. Azher
Development of biologically interpretable multimodal deep learning model for cancer prognosis prediction. SAC 2022: 636-644 - 2021
- [c6]Jerry W. Wei, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis J. Vaickus, Charles Brown, Michael Baker, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour:
A Petri Dish for Histopathology Image Analysis. AIME 2021: 11-24 - [c5]Joshua J. Levy, Christian Haudenschild, Clark Barwick, Brock C. Christensen, Louis J. Vaickus:
Topological Feature Extraction and Visualization of Whole Slide Images using Graph Neural Networks. PSB 2021 - [c4]Jerry W. Wei, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis J. Vaickus, Charles Brown, Michael Baker, Mustafa Nasir-Moin, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour:
Learn like a Pathologist: Curriculum Learning by Annotator Agreement for Histopathology Image Classification. WACV 2021: 2472-2482 - [i6]Jerry W. Wei, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis J. Vaickus, Charles Brown, Michael Baker, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour:
A Petri Dish for Histopathology Image Analysis. CoRR abs/2101.12355 (2021) - 2020
- [c3]Joshua J. Levy
Preliminary Evaluation of the Utility of Deep Generative Histopathology Image Translation at a Mid-sized NCI Cancer Center. BIOINFORMATICS 2020: 302-311 - [c2]Joshua J. Levy, Lucas A. Salas, Brock C. Christensen, Aravindhan Sriharan, Louis J. Vaickus:
PathFlowAI: A High-Throughput Workflow for Preprocessing, Deep Learning and Interpretation inDigital Pathology. PSB 2020: 403-414 - [i5]Joshua J. Levy
Longevity Associated Geometry Identified in Satellite Images: Sidewalks, Driveways and Hiking Trails. CoRR abs/2003.08750 (2020) - [i4]Jerry W. Wei, Arief A. Suriawinata, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Louis J. Vaickus, Charles Brown, Michael Baker, Mustafa Nasir-Moin, Naofumi Tomita, Lorenzo Torresani, Jason Wei, Saeed Hassanpour:
Learn like a Pathologist: Curriculum Learning by Annotator Agreement for Histopathology Image Classification. CoRR abs/2009.13698 (2020)
2010 – 2019
- 2019
- [c1]Jerry W. Wei, Arief A. Suriawinata, Louis J. Vaickus, Bing Ren, Xiaoying Liu, Jason Wei, Saeed Hassanpour:
Generative Image Translation for Data Augmentation in Colorectal Histopathology Images. ML4H@NeurIPS 2019: 10-24 - [i3]Jason W. Wei, Laura J. Tafe, Yevgeniy A. Linnik, Louis J. Vaickus, Naofumi Tomita, Saeed Hassanpour:
Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks. CoRR abs/1901.11489 (2019) - [i2]Jason W. Wei, Arief A. Suriawinata, Louis J. Vaickus, Bing Ren, Xiaoying Liu, Mikhail Lisovsky, Naofumi Tomita, Behnaz Abdollahi, Adam S. Kim, Dale C. Snover, John A. Baron, Elizabeth L. Barry, Saeed Hassanpour:
Deep neural networks for automated classification of colorectal polyps on histopathology slides: A multi-institutional evaluation. CoRR abs/1909.12959 (2019) - [i1]Jerry W. Wei, Arief A. Suriawinata, Louis J. Vaickus, Bing Ren, Xiaoying Liu, Jason Wei, Saeed Hassanpour:
Generative Image Translation for Data Augmentation in Colorectal Histopathology Images. CoRR abs/1910.05827 (2019)
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