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2020 – today

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2023
[c36]
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Mercedes Argüello Casteleiro, Niamh Joyce, Nava Maroto, Maria Jesus Fernandez Prieto, Timothy Furmston, Diego Maseda-Fernandez, Phillip Lord, Chris Wroe, John A. Keane, Ying Cheong, Robert Stevens:
Text-based phenotyping with Semantic Deep Learning: setting up experiments for women's health. SWAT4HCLS 2023: 161-162
2021
[j26]
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Nizal Alshammry, Phillip Lord:
Identitas: Semantics-free and human-readable identifiers. Appl. Ontology 16(4): 379-394 (2021)
[c35]
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Phillip Lord, Jennifer D. Warrender:
Horned-OWL: Building Ontologies at Big Data Scale. ICBO 2021: 134-136
2020
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Jordan Barnes, John Colquhoun, Marie Devlin, Laura Heels, Phillip Lord, Lindsay F. Marshall, Chris Napier, Ellis Solaiman, Neil Speirs, Louise Talbot, Gary Ushaw, Charlie Witty:
Designing a Portfolio-Oriented Curriculum using Problem Based Learning. CEP 2020: 11:1-11:4

2010 – 2019

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2019
[j25]
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Jennifer D. Warrender, Anthony V. Moorman, Phillip Lord:
A fully computational and reasonable representation for karyotypes. Bioinform. 35(24): 5264-5270 (2019)
[j24]
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Robert Stevens, Phillip Lord, James Malone, Nicolas Matentzoglu:
Measuring expert performance at manually classifying domain entities under upper ontology classes. J. Web Semant. 57 (2019)
[c33]
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Aisha Blfgeh, Phillip Lord:
Wordified Ontologies: Evaluating a Novel Paradigm for Ontology Editing. ICBO 2019: 1-7
[c32]
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Mohammad K. Halawani, Rob Forsyth, Phillip Lord:
Semi-Automated Data-Driven Methods to Support Ontology Development: A Case Study on a Rehabilitation Therapy Ontology. SWAT4HCLS 2019: 131-132
2018
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Matthew Horridge, Phillip Lord, Jennifer D. Warrender:
Proceedings of the 8th International Conference on Biomedical Ontology (ICBO 2017), Newcastle-upon-Tyne, United Kingdom, September 13th - 15th, 2017. CEUR Workshop Proceedings 2137, CEUR-WS.org 2018 [contents]
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Robert Stevens, Phillip Lord:
Ontologies and Life Science Data Management. Encyclopedia of Database Systems (2nd ed.) 2018
[i18]
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  - journals/corr/abs-1810-05093
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Robert Stevens, Phillip Lord, James Malone, Nicolas Matentzoglu:
Measuring Expert Performance at Manually Classifying Domain Entities under Upper Ontology Classes. CoRR abs/1810.05093 (2018)
2017
[j23]
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Michael J. Bell, Phillip W. Lord:
On patterns and re-use in bioinformatics databases. Bioinform. 33(17): 2731-2736 (2017)
[j22]
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Aisha Blfgeh, Jennifer D. Warrender, Catharien M. U. Hilkens, Phillip Lord:
A document-centric approach for developing the tolAPC ontology. J. Biomed. Semant. 8(1): 54:1-54:9 (2017)
[c31]
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Nizal Alshammry, Phillip Lord:
Identitas: A Better Way To Be Meaningless. ICBO 2017
[c30]
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Aisha Blfgeh, Phillip Lord:
User and Developer Interaction with Editable and Readable Ontologies. ICBO 2017
[c29]
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Mohammad K. Halawani, Rob Forsyth, Phillip W. Lord:
A Literature Based Approach to Define the Scope of Biomedical Ontologies: A Case Study on a Rehabilitation Therapy Ontology. ICBO 2017
[c28]
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Phillip W. Lord, Robert Stevens:
Facets, Tiers and Gems: Ontology Patterns for the Hypernormalisation. ICBO 2017
[c27]
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Goksel Misirli, Phillip Lord:
Tawny-SBOL: Using Ontologies to Design and Constrain Genetic Circuits. ICBO 2017
[c26]
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Aisha Blfgeh, Phillip Lord:
Document-centric Workflow: a Framework for Ontology Development. SWAT4LS 2017
[i17]
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Michael J. Bell, Phillip W. Lord:
On Patterns and Re-Use in Bioinformatics Databases. CoRR abs/1705.08730 (2017)
[i16]
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Aisha Blfgeh, Phillip Lord:
User and Developer Interaction with Editable and Readable Ontologies. CoRR abs/1709.08982 (2017)
[i15]
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Nizal Alshammry, Phillip Lord:
Identitas: A Better Way To Be Meaningless. CoRR abs/1709.09021 (2017)
[i14]
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Mohammad K. Halawani, Rob Forsyth, Phillip W. Lord:
A Literature Based Approach to Define the Scope of Biomedical Ontologies: A Case Study on a Rehabilitation Therapy Ontology. CoRR abs/1709.09450 (2017)
[i13]
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Phillip W. Lord, Robert Stevens:
Facets, Tiers and Gems: Ontology Patterns for Hypernormalisation. CoRR abs/1711.07273 (2017)
2016
[c25]
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Aisha Blfgeh, Jennifer D. Warrender, Catharien M. U. Hilkens, Phillip Lord:
A document-centric approach for developing the tolAPC Ontology. ODLS 2016: 1-6
2015
[c24]
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Phillip Lord, Jennifer D. Warrender:
Highly literate ontologies. ICBO 2015
[c23]
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Jennifer D. Warrender, Phillip Lord:
Scaffolding the mitochondrial Disease Ontology from extant knowledge sources. ICBO 2015
[c22]
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Phillip Lord, Jennifer D. Warrender:
A Highly Literate Approach to Ontology Building. SWAT4LS 2015: 94-107
[i12]
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Jennifer D. Warrender, Phillip Lord:
How, What and Why to test an ontology. CoRR abs/1505.04112 (2015)
[i11]
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Jennifer D. Warrender, Phillip Lord:
Scaffolding the Mitochondrial Disease Ontology from extant knowledge sources. CoRR abs/1505.04114 (2015)
[i10]
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Phillip Lord, Jennifer D. Warrender:
A Highly Literate Approach to Ontology Building. CoRR abs/1512.04250 (2015)
2014
[e2]
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Alexander García Castro, Christoph Lange, Phillip W. Lord, Robert Stevens:
Proceedings of the 4th Workshop on Semantic Publishing co-located with the 11th Extended Semantic Web Conference (ESWC 2014), Anissaras, Greece, May 25th, 2014. CEUR Workshop Proceedings 1155, CEUR-WS.org 2014 [contents]
2013
[j21]
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Phillip W. Lord, Daniel C. Swan, Simon J. Cockell, Robert Stevens:
The Ontogenesis Knowledgeblog: Lightweight publishing about semantics, with semantics. Bull. IEEE Tech. Comm. Digit. Libr. 9(1) (2013)
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Phillip Lord, Lindsay F. Marshall:
Twenty-Five Shades of Greycite: Semantics for Referencing and Preservation. SePublica 2013: 10-21
[c20]
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Phillip Lord:
The Semantic Web takes Wing: Programming Ontologies with Tawny-OWL. OWLED 2013
[c19]
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Jennifer D. Warrender, Phillip Lord:
A Pattern-driven Approach to Biomedical Ontology Engineering. SWAT4LS 2013
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Alexander García Castro, Christoph Lange, Phillip W. Lord, Robert Stevens:
Proceedings of the 3rd Workshop on Semantic Publishing, Montpellier, France, May 26th, 2013. CEUR Workshop Proceedings 994, CEUR-WS.org 2013 [contents]
[i9]
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Phillip Lord:
The Semantic Web takes Wing: Programming Ontologies with Tawny-OWL. CoRR abs/1303.0213 (2013)
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Phillip Lord, Lindsay F. Marshall:
Twenty-Five Shades of Greycite: Semantics for referencing and preservation. CoRR abs/1304.7151 (2013)
[i7]
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Jennifer D. Warrender, Phillip Lord:
The Karyotype Ontology: a computational representation for human cytogenetic patterns. CoRR abs/1305.3758 (2013)
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Michael J. Bell, Matthew Collison, Phillip W. Lord:
Can inferred provenance and its visualisation be used to detect erroneous annotation? A case study using UniProtKB. CoRR abs/1308.4618 (2013)
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Phillip Lord:
An evolutionary approach to Function. CoRR abs/1309.5984 (2013)
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Jennifer D. Warrender, Phillip Lord:
A pattern-driven approach to biomedical ontology engineering. CoRR abs/1312.0465 (2013)
2012
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Jochen Weile, Katherine James, Jennifer Hallinan, Simon J. Cockell, Phillip W. Lord, Anil Wipat, Darren J. Wilkinson:
Bayesian integration of networks without gold standards. Bioinform. 28(11): 1495-1500 (2012)
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Michael J. Bell, Colin S. Gillespie, Daniel Swan, Phillip W. Lord:
An approach to describing and analysing bulk biological annotation quality: a case study using UniProtKB. Bioinform. 28(18): 562-568 (2012)
[j18]
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Phillip W. Lord, Simon J. Cockell, Robert Stevens:
Three Steps to Heaven: Semantic Publishing in a Real World Workflow. Future Internet 4(4): 1004-1015 (2012)
[c18]
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Phillip Lord, Simon J. Cockell, Robert Stevens:
Three Steps to Heaven: Semantic Publishing in a Real World Workflow. SePublica@ESWC 2012: 23-34
[c17]
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Robert Stevens, Phillip Lord:
Semantic Publishing of Knowledge about Amino Acids. SePublica@ESWC 2012: 45-48
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  - journals/corr/abs-1206-5135
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Phillip W. Lord, Simon J. Cockell, Robert Stevens:
Three Steps to Heaven: Semantic Publishing in a Real World Workflow. CoRR abs/1206.5135 (2012)
[i2]
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  - journals/corr/abs-1208-2175
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Michael J. Bell, Colin S. Gillespie, Daniel Swan, Phillip W. Lord:
An approach to describing and analysing bulk biological annotation quality: a case study using UniProtKB. CoRR abs/1208.2175 (2012)
2011
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Jochen Weile, Matthew R. Pocock, Simon J. Cockell, Phillip W. Lord, James M. Dewar, Eva-Maria Holstein, Darren J. Wilkinson, David A. Lydall, Jennifer Hallinan, Anil Wipat:
Customizable views on semantically integrated networks for systems biology. Bioinform. 27(9): 1299-1306 (2011)
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Andrea Splendiani, Christopher J. Rawlings, Shao-Chih Kuo, Robert Stevens, Phillip W. Lord:
Lost in translation: data integration tools meet the Semantic Web (experiences from the Ondex project). CoRR abs/1103.4749 (2011)
2010
[j16]
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Larisa N. Soldatova, Phillip W. Lord, Susanna-Assunta Sansone, Susie Stephens, Nigam H. Shah:
Selected papers from the 12^th annual Bio-Ontologies meeting. J. Biomed. Semant. 1(S-1): I1 (2010)
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Allyson L. Lister, Phillip W. Lord, Matthew R. Pocock, Anil Wipat:
Annotation of SBML models through rule-based semantic integration. J. Biomed. Semant. 1(S-1): S3 (2010)
[j14]
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Phillip W. Lord:
An evolutionary approach to Function. J. Biomed. Semant. 1(S-1): S4 (2010)
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Ryan Remy Brinkman, Mélanie Courtot, Dirk Derom, Jennifer Fostel, Yongqun He, Phillip W. Lord, James Malone, Helen E. Parkinson, Björn Peters, Philippe Rocca-Serra, Alan Ruttenberg, Susanna-Assunta Sansone, Larisa N. Soldatova, Christian J. Stoeckert Jr., Jessica A. Turner, Jie Zheng, et al.:
Modeling biomedical experimental processes with OBI. J. Biomed. Semant. 1(S-1): S7 (2010)
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Simon J. Cockell, Jochen Weile, Phillip W. Lord, Claire Wipat, Dmytro Andriychenko, Matthew R. Pocock, Darren J. Wilkinson, Malcolm Young, Anil Wipat:
An integrated dataset for in silico drug discovery. J. Integr. Bioinform. 7(3) (2010)
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Alexander García Castro, Kieran O'Neill, Leyla Jael García Castro, Phillip W. Lord, Robert Stevens, Óscar Corcho, Frank Gibson:
Developing Ontologies within Decentralised Settings. Semantic e-Science 2010: 99-139

2000 – 2009

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2009
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Catia Pesquita, Daniel Faria, André O. Falcão, Phillip W. Lord, Francisco M. Couto:
Semantic Similarity in Biomedical Ontologies. PLoS Comput. Biol. 5(7) (2009)
[c16]
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Catherine Canevet, Andrea Splendiani, Shao-Chih Kuo, Robert Stevens, Phillip W. Lord, Christopher J. Rawlings:
Ondex: data integration and visualisation for the Semantic Web. SWAT4LS 2009
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Robert Stevens, Phillip W. Lord:
Application of Ontologies in Bioinformatics. Handbook on Ontologies 2009: 735-756
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Robert Stevens, Phillip W. Lord:
Ontologies and Life Science Data Management. Encyclopedia of Database Systems 2009: 1960-1963
2007
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Emanuela Merelli, Giuliano Armano, Nicola Cannata, Flavio Corradini, Mark d'Inverno, Andreas Doms, Phillip W. Lord, Andrew C. R. Martin, Luciano Milanesi, Steffen Möller, Michael Schroeder, Michael Luck:
Agents in bioinformatics, computational and systems biology. Briefings Bioinform. 8(1): 45-59 (2007)
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Mikel Egaña Aranguren, Sean Bechhofer, Phillip W. Lord, Ulrike Sattler, Robert D. Stevens:
Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL. BMC Bioinform. 8 (2007)
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Chris Wroe, Carole A. Goble, Antoon Goderis, Phillip W. Lord, Simon Miles, Juri Papay, Pinar Alper, Luc Moreau:
Recycling workflows and services through discovery and reuse. Concurr. Comput. Pract. Exp. 19(2): 181-194 (2007)
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Katy Wolstencroft, Pinar Alper, Duncan Hull, Chris Wroe, Phillip W. Lord, Robert D. Stevens, Carole A. Goble:
The _myGrid ontology: bioinformatics service discovery. Int. J. Bioinform. Res. Appl. 3(3): 303-325 (2007)
2006
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Thomas M. Oinn, Robert Mark Greenwood, Matthew Addis, Mahmut Nedim Alpdemir, Justin Ferris, Kevin Glover, Carole A. Goble, Antoon Goderis, Duncan Hull, Darren Marvin, Peter Li, Phillip W. Lord, Matthew R. Pocock, Martin Senger, Robert Stevens, Anil Wipat, Chris Wroe:
Taverna: lessons in creating a workflow environment for the life sciences. Concurr. Comput. Pract. Exp. 18(10): 1067-1100 (2006)
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Sean Bechhofer, Robert D. Stevens, Phillip W. Lord:
GOHSE: Ontology driven linking of biology resources. J. Web Semant. 4(3): 155-163 (2006)
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Katy Wolstencroft, Phillip W. Lord, Lydia Tabernero, Andy Brass, Robert Stevens:
Protein classification using ontology classification. ISMB (Supplement of Bioinformatics) 2006: 530-538
[c14]
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Robert Stevens, Phillip W. Lord, Andrew Gibson:
Something Nasty in the Woodshed: the Public Knowledge Model. OWLED 2006
2005
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Phillip W. Lord, Robert Stevens, James A. Butler, Robin McEntire:
The Eighth Annual Bio-Ontologies Meeting. PLoS Comput. Biol. 1(7) (2005)
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Katy Wolstencroft, Thomas M. Oinn, Carole A. Goble, Justin Ferris, Chris Wroe, Phillip W. Lord, Kevin Glover, Robert Stevens:
Panoply of Utilities in Taverna. e-Science 2005: 156-162
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Phillip W. Lord, Pinar Alper, Chris Wroe, Carole A. Goble:
Feta: A Light-Weight Architecture for User Oriented Semantic Service Discovery. ESWC 2005: 17-31
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Kevin L. Garwood, Phillip W. Lord, Helen E. Parkinson, Norman W. Paton, Carole A. Goble:
Pedro Ontology Services: A Framework for Rapid Ontology Markup. ESWC 2005: 578-591
[c10]
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Holger Knublauch, Matthew Horridge, Mark A. Musen, Alan L. Rector, Robert Stevens, Nick Drummond, Phillip W. Lord, Natalya Fridman Noy, Julian Seidenberg, Hai Wang:
The Protege OWL Experience. OWLED 2005
[c9]
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Sean Bechhofer, Robert D. Stevens, Phillip W. Lord:
Ontology Driven Dynamic Linking of Biology Resources. Pacific Symposium on Biocomputing 2005: 93-103
[c8]
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Antoon Goderis, Ulrike Sattler, Phillip W. Lord, Carole A. Goble:
Seven Bottlenecks to Workflow Reuse and Repurposing. ISWC 2005: 323-337
[c7]
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Katy Wolstencroft, Andy Brass, Ian Horrocks, Phillip W. Lord, Ulrike Sattler, Daniele Turi, Robert Stevens:
A Little Semantic Web Goes a Long Way in Biology. ISWC 2005: 786-800
2004
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Chris Wroe, Carole A. Goble, Robert Mark Greenwood, Phillip W. Lord, Simon Miles, Juri Papay, Terry R. Payne, Luc Moreau:
Automating Experiments Using Semantic Data on a Bioinformatics Grid. IEEE Intell. Syst. 19(1): 48-55 (2004)
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Robert D. Stevens, Hannah J. Tipney, Chris Wroe, Thomas M. Oinn, Martin Senger, Phillip W. Lord, Carole A. Goble, Andy Brass, M. Tassabehji:
Exploring Williams-Beuren syndrome using ^myGrid. ISMB/ECCB (Supplement of Bioinformatics) 2004: 303-310
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Phillip W. Lord, Sean Bechhofer, Mark D. Wilkinson, Gary S. Schiltz, Damian Gessler, Duncan Hull, Carole A. Goble, Lincoln Stein:
Applying Semantic Web Services to Bioinformatics: Experiences Gained, Lessons Learnt. ISWC 2004: 350-364
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Robert Stevens, Chris Wroe, Phillip W. Lord, Carole A. Goble:
Ontologies in Bioinformatics. Handbook on Ontologies 2004: 635-658
2003
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Phillip W. Lord, Robert D. Stevens, Andy Brass, Carole A. Goble:
Investigating Semantic Similarity Measures Across the Gene Ontology: The Relationship Between Sequence and Annotation. Bioinform. 19(10): 1275-1283 (2003)
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Luc Moreau, Simon Miles, Carole A. Goble, Robert Mark Greenwood, Vijay Dialani, Matthew Addis, Mahmut Nedim Alpdemir, Rich Cawley, David De Roure, Justin Ferris, Robert J. Gaizauskas, Kevin Glover, Chris Greenhalgh, Peter Li, Xiaojian Liu, Phillip W. Lord, Michael Luck, Darren Marvin, Thomas M. Oinn, Norman W. Paton, Steve Pettifer, Milena V. Radenkovic, Angus Roberts, Alan J. Robinson, Tom Rodden, Martin Senger, Nick Sharman, Robert Stevens, Brian Warboys, Anil Wipat, Chris Wroe:
On the Use of Agents in BioInformatics Grid. CCGRID 2003: 653-660
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Phillip W. Lord, Robert D. Stevens, Andy Brass, Carole A. Goble:
Semantic Similarity Measures as Tools for Exploring the Gene Ontology. Pacific Symposium on Biocomputing 2003: 601-612
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Sean Bechhofer, Raphael Volz, Phillip W. Lord:
Cooking the Semantic Web with the OWL API. ISWC 2003: 659-675
2002
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Phillip W. Lord, J. N. Selley, Terri K. Attwood:
CINEMA-MX: a modular multiple alignment editor. Bioinform. 18(10): 1402-1403 (2002)
2001
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Phillip W. Lord, Jacqueline Renée Reich, Alex L. Mitchell, Robert D. Stevens, Terri K. Attwood, Carole A. Goble:
PRECIS: An Automated Pipeline for Producing Concise Reports About Proteins. BIBE 2001: 57-64

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