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Mark A. Knepper
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2010 – 2019
- 2019
- [j5]Thammakorn Saethang, Kenneth Hodge, Chin-Rang Yang, Yue Zhao, Ingorn Kimkong, Mark A. Knepper, Trairak Pisitkun:
PTM-Logo: a program for generation of sequence logos based on position-specific background amino-acid probabilities. Bioinform. 35(24): 5313-5314 (2019) - 2018
- [j4]Thammakorn Saethang, Kenneth Hodge, Ingorn Kimkong, D. Michael Payne, Mark A. Knepper, Trairak Pisitkun:
AbDesigner3D: a structure-guided tool for peptide-based antibody production. Bioinform. 34(12): 2158-2160 (2018) - 2014
- [j3]Fahad Saeed, Jason D. Hoffert, Trairak Pisitkun, Mark A. Knepper:
Exploiting thread-level and instruction-level parallelism to cluster mass spectrometry data using multicore architectures. Netw. Model. Anal. Health Informatics Bioinform. 3(1) (2014) - [j2]Fahad Saeed, Jason D. Hoffert, Mark A. Knepper:
CAMS-RS: Clustering Algorithm for Large-Scale Mass Spectrometry Data Using Restricted Search Space and Intelligent Random Sampling. IEEE ACM Trans. Comput. Biol. Bioinform. 11(1): 128-141 (2014) - 2013
- [c5]Fahad Saeed, Jason D. Hoffert, Mark A. Knepper:
A high performance algorithm for clustering of large-scale protein mass spectrometry data using multi-core architectures. ASONAM 2013: 923-930 - [i2]Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert:
An Efficient Algorithm for Clustering of Large-Scale Mass Spectrometry Data. CoRR abs/1301.0834 (2013) - 2012
- [c4]Fahad Saeed, Jason D. Hoffert, Trairak Pisitkun, Mark A. Knepper:
High performance phosphorylation site assignment algorithm for mass spectrometry data using multicore systems. BCB 2012: 667-672 - [c3]Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert:
An efficient algorithm for clustering of large-scale mass spectrometry data. BIBM 2012: 1-4 - [c2]Fahad Saeed, Trairak Pisitkun, Jason D. Hoffert, Guanghui Wang, Marjan Gucek, Mark A. Knepper:
An efficient dynamic programming algorithm for phosphorylation site assignment of large-scale mass spectrometry data. BIBM Workshops 2012: 618-625 - 2011
- [c1]Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert:
Mining Temporal Patterns from iTRAQ Mass Spectrometry(LC-MS/MS) Data. BICoB 2011: 152-159 - [i1]Fahad Saeed, Trairak Pisitkun, Mark A. Knepper, Jason D. Hoffert:
Mining Temporal Patterns from iTRAQ Mass Spectrometry(LC-MS/MS) Data. CoRR abs/1104.5510 (2011)
1990 – 1999
- 1995
- [j1]Harold E. Layton, E. Bruce Pitman, Mark A. Knepper:
A Dynamic Numerical Method for Models of the Urine Concentrating Mechanism. SIAM J. Appl. Math. 55(5): 1390-1418 (1995)
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