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Sofie Van Landeghem
Person information
- affiliation: Ghent University, Department of Plant Biotechnology and Bioinformatics, Belgium
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2020 – today
- 2022
- [i1]Lester James V. Miranda
, Ákos Kádár, Adriane Boyd, Sofie Van Landeghem, Anders Søgaard, Matthew Honnibal:
Multi hash embeddings in spaCy. CoRR abs/2212.09255 (2022)
2010 – 2019
- 2016
- [j9]Suwisa Kaewphan, Sofie Van Landeghem, Tomoko Ohta, Yves Van de Peer
Cell line name recognition in support of the identification of synthetic lethality in cancer from text. Bioinform. 32(2): 276-282 (2016) - [j8]Sofie Van Landeghem, Thomas Van Parys, Marieke Dubois
Diffany: an ontology-driven framework to infer, visualise and analyse differential molecular networks. BMC Bioinform. 17: 18 (2016) - 2015
- [j7]Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer
Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis. BMC Bioinform. 16(S16): S3 (2015) - 2013
- [c8]Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer, Filip Ginter:
EVEX in ST'13: Application of a large-scale text mining resource to event extraction and network construction. BioNLP@ACL (Shared Task) 2013: 26-34 - [c7]Sofie Van Landeghem, Suwisa Kaewphan, Filip Ginter, Yves Van de Peer:
Evaluating Large-scale Text Mining Applications Beyond the Traditional Numeric Performance Measures. BioNLP@ACL 2013: 63-71 - 2012
- [j6]Sofie Van Landeghem, Kai Hakala, Samuel Rönnqvist, Tapio Salakoski, Yves Van de Peer
Exploring Biomolecular Literature with EVEX: Connecting Genes through Events, Homology, and Indirect Associations. Adv. Bioinformatics 2012: 582765:1-582765:12 (2012) - [j5]Sofie Van Landeghem, Jari Björne, Thomas Abeel, Bernard De Baets, Tapio Salakoski, Yves Van de Peer
Semantically linking molecular entities in literature through entity relationships. BMC Bioinform. 13(S-11): S6 (2012) - [c6]Jari Björne, Sofie Van Landeghem, Sampo Pyysalo, Tomoko Ohta, Filip Ginter, Yves Van de Peer, Sophia Ananiadou, Tapio Salakoski:
PubMed-Scale Event Extraction for Post-Translational Modifications, Epigenetics and Protein Structural Relations. BioNLP@HLT-NAACL 2012: 82-90 - 2011
- [j4]Yoshinobu Kano, Jari Björne, Filip Ginter, Tapio Salakoski, Ekaterina Buyko, Udo Hahn, K. Bretonnel Cohen, Karin Verspoor
U-Compare bio-event meta-service: compatible BioNLP event extraction services. BMC Bioinform. 12: 481 (2011) - [j3]Sofie Van Landeghem, Bernard De Baets
High-Precision Bio-molecular Event Extraction from Text Using Parallel Binary Classifiers. Comput. Intell. 27(4): 645-664 (2011) - [c5]Sofie Van Landeghem, Filip Ginter, Yves Van de Peer, Tapio Salakoski:
EVEX: A PubMed-Scale Resource for Homology-Based Generalization of Text Mining Predictions. BioNLP@ACL 2011: 28-37 - [c4]Sofie Van Landeghem, Thomas Abeel, Bernard De Baets, Yves Van de Peer:
Detecting Entity Relations as a Supporting Task for Bio-Molecular Event Extraction. BioNLP@ACL (Shared Task) 2011: 147-148 - 2010
- [j2]Sofie Van Landeghem, Thomas Abeel
Discriminative and informative features for biomolecular text mining with ensemble feature selection. Bioinform. 26(18) (2010) - [j1]Thomas Abeel, Sofie Van Landeghem, Roser Morante, Vincent Van Asch, Yves Van de Peer
Highlights of the BioTM 2010 workshop on advances in bio text mining. BMC Bioinform. 11(S-5): I1 (2010) - [c3]Sofie Van Landeghem, Sampo Pyysalo, Tomoko Ohta, Yves Van de Peer:
Integration of Static Relations to Enhance Event Extraction from Text. BioNLP@ACL 2010: 144-152 - [c2]Yvan Saeys, Sofie Van Landeghem, Yves Van de Peer:
Event based text mining for integrated network construction. MLSB 2010: 112-121
2000 – 2009
- 2009
- [c1]Sofie Van Landeghem, Yvan Saeys, Bernard De Baets, Yves Van de Peer:
Analyzing text in search of bio-molecular events: a high-precision machine learning framework. BioNLP@HLT-NAACL (Shared Task) 2009: 128-136
Coauthor Index
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