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Janek Gröhl
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2020 – today
- 2024
- [j7]Thomas R. Else, Janek Gröhl, Lina Hacker, Sarah E. Bohndiek:
PATATO: a Python photoacoustic tomography analysis toolkit. J. Open Source Softw. 9(93): 5686 (2024) - [j6]Janek Gröhl, Thomas R. Else, Lina Hacker, Ellie V. Bunce, Paul W. Sweeney, Sarah E. Bohndiek:
Moving Beyond Simulation: Data-Driven Quantitative Photoacoustic Imaging Using Tissue-Mimicking Phantoms. IEEE Trans. Medical Imaging 43(3): 1214-1224 (2024) - [i16]Janek Gröhl, Kylie Yeung, Kevin Gu, Thomas R. Else, Monika Golinska, Ellie V. Bunce, Lina Hacker, Sarah E. Bohndiek:
Distribution-informed and wavelength-flexible data-driven photoacoustic oximetry. CoRR abs/2403.14863 (2024) - [i15]Anna Breger, Ander Biguri, Malena Sabaté Landman, Ian Selby, Nicole Amberg, Elisabeth Brunner, Janek Gröhl, Sepideh Hatamikia, Clemens Karner, Lipeng Ning, Sören Dittmer, Michael Roberts, AIX-COVNET Collaboration, Carola-Bibiane Schönlieb:
A study of why we need to reassess full reference image quality assessment with medical images. CoRR abs/2405.19097 (2024) - [i14]Anna Breger, Clemens Karner, Ian Selby, Janek Gröhl, Sören Dittmer, Edward Lilley, Judith Babar, Jake Beckford, Timothy J. Sadler, Shahab Shahipasand, Arthikkaa Thavakumar, Michael Roberts, Carola-Bibiane Schönlieb:
A study on the adequacy of common IQA measures for medical images. CoRR abs/2405.19224 (2024) - [i13]Clemens Karner, Janek Gröhl, Ian Selby, Judith Babar, Jake Beckford, Thomas R. Else, Timothy J. Sadler, Shahab Shahipasand, Arthikkaa Thavakumar, Michael Roberts, James H. F. Rudd, Carola-Bibiane Schönlieb, Jonathan R. Weir-McCall, Anna Breger:
Parameter choices in HaarPSI for IQA with medical images. CoRR abs/2410.24098 (2024) - 2023
- [c7]Niklas Holzwarth, Melanie Schellenberg, Janek Gröhl, Kris Dreher, Jan-Hinrich Nölke, Alexander Seitel, Minu Dietlinde Tizabi, Beat P. Müller-Stich, Lena Maier-Hein:
Abstract: Tattoo-Tomographie - Freihand-3D-Photoakustik und multimodale Bildfusion. Bildverarbeitung für die Medizin 2023: 114 - [c6]Kris K. Dreher, Leonardo Ayala, Melanie Schellenberg, Marco Hübner, Jan-Hinrich Nölke, Tim J. Adler, Silvia Seidlitz, Jan Sellner, Alexander Studier-Fischer, Janek Gröhl, Felix Nickel, Ullrich Köthe, Alexander Seitel, Lena Maier-Hein:
Unsupervised Domain Transfer with Conditional Invertible Neural Networks. MICCAI (1) 2023: 770-780 - [i12]Kris K. Dreher, Leonardo Ayala, Melanie Schellenberg, Marco Hübner, Jan-Hinrich Nölke, Tim J. Adler, Silvia Seidlitz, Jan Sellner, Alexander Studier-Fischer, Janek Gröhl, Felix Nickel, Ullrich Köthe, Alexander Seitel, Lena Maier-Hein:
Unsupervised Domain Transfer with Conditional Invertible Neural Networks. CoRR abs/2303.10191 (2023) - [i11]Janek Gröhl, Thomas R. Else, Lina Hacker, Ellie V. Bunce, Paul W. Sweeney, Sarah E. Bohndiek:
Moving beyond simulation: data-driven quantitative photoacoustic imaging using tissue-mimicking phantoms. CoRR abs/2306.06748 (2023) - 2021
- [b1]Janek Gröhl:
Data-driven Quantitative Photoacoustic Imaging. Heidelberg University, Germany, 2021 - [j5]Niklas Holzwarth, Melanie Schellenberg, Janek Gröhl, Kris Dreher, Jan-Hinrich Nölke, Alexander Seitel, Minu Dietlinde Tizabi, Beat P. Müller-Stich, Lena Maier-Hein:
Tattoo tomography: Freehand 3D photoacoustic image reconstruction with an optical pattern. Int. J. Comput. Assist. Radiol. Surg. 16(7): 1101-1110 (2021) - [c5]Jan-Hinrich Nölke, Tim Adler, Janek Gröhl, Thomas Kirchner, Lynton Ardizzone, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Invertible Neural Networks for Uncertainty Quantification in Photoacoustic Imaging. Bildverarbeitung für die Medizin 2021: 330-335 - [i10]Melanie Schellenberg, Janek Gröhl, Kris Dreher, Niklas Holzwarth, Minu Dietlinde Tizabi, Alexander Seitel, Lena Maier-Hein:
Data-driven generation of plausible tissue geometries for realistic photoacoustic image synthesis. CoRR abs/2103.15510 (2021) - [i9]Janek Gröhl, Melanie Schellenberg, Kris Dreher, Niklas Holzwarth, Minu Dietlinde Tizabi, Alexander Seitel, Lena Maier-Hein:
Semantic segmentation of multispectral photoacoustic images using deep learning. CoRR abs/2105.09624 (2021) - 2020
- [d2]Janek Gröhl, Thomas Kirchner, Tim J. Adler, Lina Hacker, Niklas Holzwarth, Adrián Hernández-Aguilera, Mildred A. Herrera, Edgar Santos, Sarah E. Bohndiek, Lena Maier-Hein:
Supplementary code and data for "Learned spectral decoloring enables photoacoustic oximetry". Zenodo, 2020 - [i8]Lena Maier-Hein, Martin Wagner, Tobias Roß, Annika Reinke, Sebastian Bodenstedt, Peter M. Full, Hellena Hempe, Diana Mîndroc-Filimon, Patrick Scholz, Thuy Nuong Tran, Pierangela Bruno, Anna Kisilenko, Benjamin Müller, Tornike Davitashvili, Manuela Capek, Minu Tizabi, Matthias Eisenmann, Tim J. Adler, Janek Gröhl, Melanie Schellenberg, Silvia Seidlitz, T. Y. Emmy Lai, Veith Roethlingshoefer, Fabian Both, Sebastian Bittel, Marc Mengler, Martin Apitz, Stefanie Speidel, Hannes Götz Kenngott, Beat P. Müller-Stich:
Heidelberg Colorectal Data Set for Surgical Data Science in the Sensor Operating Room. CoRR abs/2005.03501 (2020) - [i7]Janek Gröhl, Melanie Schellenberg, Kris Dreher, Lena Maier-Hein:
Deep learning for biomedical photoacoustic imaging: A review. CoRR abs/2011.02744 (2020) - [i6]Niklas Holzwarth, Melanie Schellenberg, Janek Gröhl, Kris Dreher, Jan-Hinrich Nölke, Alexander Seitel, Minu Dietlinde Tizabi, Beat P. Müller-Stich, Lena Maier-Hein:
Tattoo tomography: Freehand 3D photoacoustic image reconstruction with an optical pattern. CoRR abs/2011.04997 (2020) - [i5]Jan-Hinrich Nölke, Tim Adler, Janek Gröhl, Thomas Kirchner, Lynton Ardizzone, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Invertible Neural Networks for Uncertainty Quantification in Photoacoustic Imaging. CoRR abs/2011.05110 (2020)
2010 – 2019
- 2019
- [j4]Tim J. Adler, Lynton Ardizzone, Anant Suraj Vemuri, Leonardo Ayala, Janek Gröhl, Thomas Kirchner, Sebastian J. Wirkert, Jakob Kruse, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks. Int. J. Comput. Assist. Radiol. Surg. 14(6): 997-1007 (2019) - [c4]Leonardo A. Ayala, Sebastian J. Wirkert, Janek Gröhl, Mildred A. Herrera, Adrián Hernández-Aguilera, Anant Suraj Vemuri, Edgar Santos, Lena Maier-Hein:
Live Monitoring of Haemodynamic Changes with Multispectral Image Analysis. OR/MLCN@MICCAI 2019: 38-46 - [i4]Thomas Kirchner, Janek Gröhl, Franz Sattler, Moritz S. Bischoff, Angelika Laha, Marco Nolden, Lena Maier-Hein:
An open-source software platform for translational photoacoustic research and its application to motion-corrected blood oxygenation estimation. CoRR abs/1901.09781 (2019) - [i3]Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein:
Estimation of blood oxygenation with learned spectral decoloring for quantitative photoacoustic imaging (LSD-qPAI). CoRR abs/1902.05839 (2019) - [i2]Tim J. Adler, Lynton Ardizzone, Anant Suraj Vemuri, Leonardo Ayala, Janek Gröhl, Thomas Kirchner, Sebastian J. Wirkert, Jakob Kruse, Carsten Rother, Ullrich Köthe, Lena Maier-Hein:
Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks. CoRR abs/1903.03441 (2019) - 2018
- [j3]Thomas Kirchner, Franz Sattler, Janek Gröhl, Lena Maier-Hein:
Signed Real-Time Delay Multiply and Sum Beamforming for Multispectral Photoacoustic Imaging. J. Imaging 4(10): 121 (2018) - [j2]Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein:
Confidence Estimation for Machine Learning-Based Quantitative Photoacoustics. J. Imaging 4(12): 147 (2018) - [c3]Dominik Waibel, Janek Gröhl, Fabian Isensee, Klaus Hermann Maier-Hein, Lena Maier-Hein:
Abstract: Rekonstruktion der initialen Druckverteilung photoakustischer Bilder mit limitiertem Blickwinkel durch maschinelle Lernverfahren. Bildverarbeitung für die Medizin 2018: 201 - [d1]Janek Gröhl, Thomas Kirchner, Tim Adler, Lena Maier-Hein:
In silico 2D photoacoustic imaging data. Zenodo, 2018 - 2017
- [j1]Martin Klemm, Thomas Kirchner, Janek Gröhl, Dominique Cheray, Marco Nolden, Alexander Seitel, Harald Hoppe, Lena Maier-Hein, Alfred M. Franz:
MITK-OpenIGTLink for combining open-source toolkits in real-time computer-assisted interventions. Int. J. Comput. Assist. Radiol. Surg. 12(3): 351-361 (2017) - [c2]Janek Gröhl, Thomas Kirchner, Lena Maier-Hein:
Abstract: Quantitative Photoakustische Tomografie durch lokale Kontextkodierung. Bildverarbeitung für die Medizin 2017: 153 - [i1]Thomas Kirchner, Janek Gröhl, Lena Maier-Hein:
Local context encoding enables machine learning-based quantitative photoacoustics. CoRR abs/1706.03595 (2017) - 2016
- [c1]Lena Maier-Hein, Tobias Roß, Janek Gröhl, Ben Glocker, Sebastian Bodenstedt, Christian Stock, Eric Heim, Michael Götz, Sebastian J. Wirkert, Hannes Kenngott, Stefanie Speidel, Klaus H. Maier-Hein:
Crowd-Algorithm Collaboration for Large-Scale Endoscopic Image Annotation with Confidence. MICCAI (2) 2016: 616-623
Coauthor Index
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