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Somali Chaterji
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2020 – today
- 2024
- [c31]Chen-Yi Lu, Shubham Agarwal, Md Mehrab Tanjim, Kanak Mahadik, Anup B. Rao, Subrata Mitra, Shiv Kumar Saini, Saurabh Bagchi, Somali Chaterji:
RECON: Training-Free Acceleration for Text-to-Image Synthesis with Retrieval of Concept Prompt Trajectories. ECCV (59) 2024: 288-306 - [c30]Akhil Bandarupalli, Adithya Bhat, Somali Chaterji, Michael K. Reiter, Aniket Kate, Saurabh Bagchi:
SensorBFT: Fault-Tolerant Target Localization Using Voronoi Diagrams and Approximate Agreement. ICDCS 2024: 186-197 - [i14]Joshua C. Zhao, Saurabh Bagchi, Salman Avestimehr, Kevin S. Chan, Somali Chaterji, Dimitris Dimitriadis, Jiacheng Li, Ninghui Li, Arash Nourian, Holger R. Roth:
Federated Learning Privacy: Attacks, Defenses, Applications, and Policy Landscape - A Survey. CoRR abs/2405.03636 (2024) - 2023
- [j15]Jayoung Lee
, Pengcheng Wang
Virtuoso: Energy- and Latency-aware Streamlining of Streaming Videos on Systems-on-Chips. ACM Trans. Design Autom. Electr. Syst. 28(3): 31:1-31:32 (2023) - [c29]Atul Sharma
FLAIR: Defense against Model Poisoning Attack in Federated Learning. AsiaCCS 2023: 553-566 - [c28]Akhil Bandarupalli, Sarthak Jain, Akash Melachuri, Joseph Pappas, Somali Chaterji:
Vega: Drone-based Multi-Altitude Target Detection for Autonomous Surveillance. DCOSS-IoT 2023: 209-216 - [c27]Atul Sharma, Joshua C. Zhao, Wei Chen, Qiang Qiu, Saurabh Bagchi, Somali Chaterji:
How to Learn Collaboratively - Federated Learning to Peer-to-Peer Learning and What's at Stake. DSN-S 2023: 122-126 - 2022
- [j14]Atul Sharma, Pranjal Jain, Ashraf Mahgoub, Zihan Zhou, Kanak Mahadik, Somali Chaterji
Lerna: transformer architectures for configuring error correction tools for short- and long-read genome sequencing. BMC Bioinform. 23(1): 25 (2022) - [j13]Ashraf Mahgoub, Edgardo Barsallo Yi, Karthick Shankar, Eshaan Minocha, Sameh Elnikety, Saurabh Bagchi, Somali Chaterji:
WISEFUSE: Workload Characterization and DAG Transformation for Serverless Workflows. Proc. ACM Meas. Anal. Comput. Syst. 6(2): 26:1-26:28 (2022) - [j12]Ran Xu
ApproxNet: Content and Contention-Aware Video Object Classification System for Embedded Clients. ACM Trans. Sens. Networks 18(1): 11:1-11:27 (2022) - [c26]Ran Xu
Smartadapt: Multi-branch Object Detection Framework for Videos on Mobiles. CVPR 2022: 2518-2528 - [c25]Ran Xu
LiteReconfig: cost and content aware reconfiguration of video object detection systems for mobile GPUs. EuroSys 2022: 334-351 - [c24]Zihan Zhou, Zijia Du, Somali Chaterji:
KRATOS: Context-Aware Cell Type Classification and Interpretation using Joint Dimensionality Reduction and Clustering. KDD 2022: 2616-2625 - [c23]Ashraf Mahgoub, Edgardo Barsallo Yi, Karthick Shankar, Sameh Elnikety, Somali Chaterji, Saurabh Bagchi:
ORION and the Three Rights: Sizing, Bundling, and Prewarming for Serverless DAGs. OSDI 2022: 303-320 - [c22]Ashraf Mahgoub, Edgardo Barsallo Yi, Karthick Shankar, Eshaan Minocha, Sameh Elnikety, Saurabh Bagchi, Somali Chaterji:
WISEFUSE: Workload Characterization and DAG Transformation for Serverless Workflows. SIGMETRICS (Abstracts) 2022: 57-58 - 2021
- [j11]Michael A. Roth, Pranjal Jain, Jinkyu Koo, Somali Chaterji:
Simultaneous learning of individual microRNA-gene interactions and regulatory comodules. BMC Bioinform. 22(1): 237 (2021) - [j10]Xiaofan Jiang
Hybrid Low-Power Wide-Area Mesh Network for IoT Applications. IEEE Internet Things J. 8(2): 901-915 (2021) - [j9]Somali Chaterji
Lattice: A Vision for Machine Learning, Data Engineering, and Policy Considerations for Digital Agriculture at Scale. IEEE Open J. Comput. Soc. 2: 227-240 (2021) - [c21]Akhil Bandarupalli, Dhruv Swarup, Noah Weston, Somali Chaterji:
Persistent Airborne Surveillance using Semi-Autonomous Drone swarms. DroNet@MobiSys 2021: 19-24 - [c20]Jayoung Lee, Pengcheng Wang, Ran Xu
Benchmarking Video Object Detection Systems on Embedded Devices under Resource Contention. EMDL@MobiSys 2021: 19-24 - [c19]Ashraf Mahgoub, Karthick Shankar, Subrata Mitra, Ana Klimovic
SONIC: Application-aware Data Passing for Chained Serverless Applications. USENIX ATC 2021: 285-301 - [i13]Shikhar Suryavansh, Abu Benna, Chris Guest, Somali Chaterji:
Ambrosia: Reduction in Data Transfer from Sensor to Server for Increased Lifetime of IoT Sensor Nodes. CoRR abs/2107.05090 (2021) - [i12]Pranjal Jain, Shreyas Goenka, Saurabh Bagchi, Biplab Banerjee, Somali Chaterji:
Federated Action Recognition on Heterogeneous Embedded Devices. CoRR abs/2107.12147 (2021) - [i11]Atul Sharma, Wei Chen, Joshua C. Zhao, Qiang Qiu, Somali Chaterji, Saurabh Bagchi:
TESSERACT: Gradient Flip Score to Secure Federated Learning Against Model Poisoning Attacks. CoRR abs/2110.10108 (2021) - [i10]Pengcheng Wang, Edgardo Barsallo Yi, Tomas Ratkus, Somali Chaterji:
ORPHEUS: Living Labs for End-to-End Data Infrastructures for Digital Agriculture. CoRR abs/2111.09422 (2021) - [i9]Atul Sharma, Pranjal Jain, Ashraf Mahgoub, Zihan Zhou, Kanak Mahadik, Somali Chaterji:
Lerna: Transformer Architectures for Configuring Error Correction Tools for Short- and Long-Read Genome Sequencing. CoRR abs/2112.10068 (2021) - [i8]Jayoung Lee, Pengcheng Wang, Ran Xu, Venkat Dasari, Noah Weston, Yin Li, Saurabh Bagchi, Somali Chaterji:
Virtuoso: Video-based Intelligence for real-time tuning on SOCs. CoRR abs/2112.13076 (2021) - 2020
- [j8]Saurabh Bagchi
Vision Paper: Grand Challenges in Resilience: Autonomous System Resilience through Design and Runtime Measures. IEEE Open J. Comput. Soc. 1: 155-172 (2020) - [c18]Karthick Shankar, Pengcheng Wang, Ran Xu
JANUS: Benchmarking Commercial and Open-Source Cloud and Edge Platforms for Object and Anomaly Detection Workloads. CLOUD 2020: 590-599 - [c17]Ran Xu
ApproxDet: content and contention-aware approximate object detection for mobiles. SenSys 2020: 449-462 - [c16]Ashraf Mahgoub, Alexander Medoff, Rakesh Kumar, Subrata Mitra, Ana Klimovic
OPTIMUSCLOUD: Heterogeneous Configuration Optimization for Distributed Databases in the Cloud. USENIX ATC 2020: 189-203 - [i7]Somali Chaterji, Parinaz Naghizadeh, Muhammad Ashraful Alam, Saurabh Bagchi, Mung Chiang, David Corman, Brian J. Henz, Suman Jana, Na Li, Shaoshuai Mou, Meeko Oishi, Chunyi Peng, Tiark Rompf, Ashutosh Sabharwal, Shreyas Sundaram, James Weimer, Jennifer Weller:
Resilient Cyberphysical Systems and their Application Drivers: A Technology Roadmap. CoRR abs/2001.00090 (2020) - [i6]Somali Chaterji, Nathan DeLay, John Evans, Nathan Mosier, Bernard Engel, Dennis Buckmaster, Ranveer Chandra:
Artificial Intelligence for Digital Agriculture at Scale: Techniques, Policies, and Challenges. CoRR abs/2001.09786 (2020) - [i5]Xiaofan Jiang, Heng Zhang, Edgardo Alberto Barsallo Yi
Hybrid Low-Power Wide-Area Mesh Network for IoT Applications. CoRR abs/2006.12570 (2020) - [i4]Ran Xu, Chen-Lin Zhang, Pengcheng Wang, Jayoung Lee, Subrata Mitra, Somali Chaterji, Yin Li, Saurabh Bagchi:
ApproxDet: Content and Contention-Aware Approximate Object Detection for Mobiles. CoRR abs/2010.10754 (2020) - [i3]Karthick Shankar, Pengcheng Wang, Ran Xu, Ashraf Mahgoub, Somali Chaterji:
JANUS: Benchmarking Commercial and Open-Source Cloud and Edge Platforms for Object and Anomaly Detection Workloads. CoRR abs/2012.04880 (2020)
2010 – 2019
- 2019
- [j7]Somali Chaterji
Federation in genomics pipelines: techniques and challenges. Briefings Bioinform. 20(1): 235-244 (2019) - [j6]Folker Meyer, Saurabh Bagchi, Somali Chaterji
MG-RAST version 4 - lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis. Briefings Bioinform. 20(4): 1151-1159 (2019) - [j5]Chih-Hao Fang, Nawanol Theera-Ampornpunt, Michael A. Roth, Ananth Grama, Somali Chaterji
AIKYATAN: mapping distal regulatory elements using convolutional learning on GPU. BMC Bioinform. 20(1): 488:1-488:17 (2019) - [c15]Somali Chaterji:
Panel 1 Position Paper: Man versus Machines-Humans Need Not Apply. COMSNETS 2019: 517-519 - [c14]Somali Chaterji:
Panel 2 Position Paper: AI could Solve the World's Healthcare Problems and that too at Scale! COMSNETS 2019: 520-522 - [c13]Manish Nagaraj
Panel 3 Position Paper: Blockchain can be the Backbone of India's Economy. COMSNETS 2019: 523-526 - [c12]Ashraf Mahgoub, Paul Wood, Alexander Medoff, Subrata Mitra, Folker Meyer, Somali Chaterji, Saurabh Bagchi:
SOPHIA: Online Reconfiguration of Clustered NoSQL Databases for Time-Varying Workloads. USENIX ATC 2019: 223-240 - [i2]Saurabh Bagchi, Vaneet Aggarwal, Somali Chaterji, Fred Douglis, Aly El Gamal, Jiawei Han, Brian J. Henz, Hank Hoffmann, Suman Jana, Milind Kulkarni, Felix Xiaozhu Lin, Karen B. Marais, Prateek Mittal, Shaoshuai Mou, Xiaokang Qiu, Gesualdo Scutari:
Grand Challenges of Resilience: Autonomous System Resilience through Design and Runtime Measures. CoRR abs/1912.11598 (2019) - 2018
- [j4]Asish Ghoshal, Jinyi Zhang, Michael A. Roth, Kevin Muyuan Xia, Ananth Y. Grama, Somali Chaterji
A Distributed Classifier for MicroRNA Target Prediction with Validation Through TCGA Expression Data. IEEE ACM Trans. Comput. Biol. Bioinform. 15(4): 1037-1051 (2018) - [c11]Tara Elizabeth Thomas, Jinkyu Koo, Somali Chaterji, Saurabh Bagchi:
Minerva: A reinforcement learning-based technique for optimal scheduling and bottleneck detection in distributed factory operations. COMSNETS 2018: 129-136 - [i1]Mustafa Abdallah, Ashraf Mahgoub, Saurabh Bagchi, Somali Chaterji:
ATHENA: Automated Tuning of Genomic Error Correction Algorithms using Language Models. CoRR abs/1812.11467 (2018) - 2017
- [j3]Subramaniyam Kannan, Paul Wood, Somali Chaterji, Saurabh Bagchi, Larry Deatrick, Patricia Beane:
MAAT: Multi-Stage Attack Attribution in Enterprise Systems using Software Defined Networks. EAI Endorsed Trans. Security Safety 4(11): e4 (2017) - [c10]Kanak Mahadik, Christopher Wright, Milind Kulkarni, Saurabh Bagchi, Somali Chaterji:
Scalable Genomic Assembly through Parallel de Bruijn Graph Construction for Multiple K-mers. BCB 2017: 425-431 - [c9]Nawanol Theera-Ampornpunt, Somali Chaterji:
Prediction of enhancer RNA activity levels from ChIP-seq-derived histone modification combinatorial codes. BIBM 2017: 1206-1214 - [c8]Ashraf Mahgoub, Sachandhan Ganesh, Folker Meyer, Ananth Grama, Somali Chaterji:
Suitability of NoSQL systems - Cassandra and ScyllaDB - For IoT workloads. COMSNETS 2017: 476-479 - [c7]Ashraf Mahgoub, Paul Wood, Sachandhan Ganesh, Subrata Mitra, Wolfgang Gerlach, Travis Harrison, Folker Meyer, Ananth Grama, Saurabh Bagchi, Somali Chaterji:
Rafiki: a middleware for parameter tuning of NoSQL datastores for dynamic metagenomics workloads. Middleware 2017: 28-40 - [c6]Subramaniyam Kannan, Paul Wood, Larry Deatrick, Patricia Beane, Somali Chaterji, Saurabh Bagchi:
TopHat : Topology-Based Host-Level Attribution for Multi-stage Attacks in Enterprise Systems Using Software Defined Networks. SecureComm 2017: 687-703 - 2016
- [j2]Seong Gon Kim, Nawanol Theera-Ampornpunt, Chih-Hao Fang, Mrudul Harwani, Ananth Grama, Somali Chaterji:
Opening up the blackbox: an interpretable deep neural network-based classifier for cell-type specific enhancer predictions. BMC Syst. Biol. 10(S-2): 54 (2016) - [j1]Andreas Wilke
The MG-RAST metagenomics database and portal in 2015. Nucleic Acids Res. 44(Database-Issue): 590-594 (2016) - [c5]Nawanol Theera-Ampornpunt, Seong Gon Kim, Asish Ghoshal, Saurabh Bagchi, Ananth Grama, Somali Chaterji:
Fast training on large genomics data using distributed Support Vector Machines. COMSNETS 2016: 1-8 - [c4]Kanak Mahadik, Christopher Wright, Jinyi Zhang, Milind Kulkarni, Saurabh Bagchi, Somali Chaterji:
SARVAVID: A Domain Specific Language for Developing Scalable Computational Genomics Applications. ICS 2016: 34:1-34:12 - 2015
- [c3]Asish Ghoshal, Ananth Grama, Saurabh Bagchi, Somali Chaterji:
An ensemble SVM model for the accurate prediction of non-canonical MicroRNA targets. BCB 2015: 403-412 - [c2]Seong Gon Kim, Nawanol Theera-Ampornpunt, Ananth Grama, Somali Chaterji:
Interpretable deep neural networks for enhancer prediction. BIBM 2015: 242-249 - 2014
- [c1]Kanak Mahadik, Somali Chaterji, Bowen Zhou, Milind Kulkarni, Saurabh Bagchi:
Orion: Scaling Genomic Sequence Matching with Fine-Grained Parallelization. SC 2014: 449-460
Coauthor Index
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