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Evan E. Eichler
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2020 – today
- 2023
- [j16]Philip C. Dishuck
, Allison N. Rozanski, Glennis Logsdon, David Porubsky, Evan E. Eichler:
GAVISUNK: genome assembly validation via inter-SUNK distances in Oxford Nanopore reads. Bioinform. 39(1) (2023) - 2022
- [j15]Mitchell R. Vollger
StainedGlass: interactive visualization of massive tandem repeat structures with identity heatmaps. Bioinform. 38(7): 2049-2051 (2022)
2010 – 2019
- 2018
- [j14]Maryam Ghareghani, David Porubsky
Strand-seq enables reliable separation of long reads by chromosome via expectation maximization. Bioinform. 34(13): i115-i123 (2018) - 2017
- [j13]Tychele Turner
denovo-db: a compendium of human de novo variants. Nucleic Acids Res. 45(Database-Issue): D804-D811 (2017) - [c6]Mark J. P. Chaisson, Sudipto Mukherjee, Sreeram Kannan, Evan E. Eichler:
Resolving Multicopy Duplications de novo Using Polyploid Phasing. RECOMB 2017: 117-133 - 2014
- [j12]Phuong Dao, Ibrahim Numanagic, Yen-Yi Lin, Faraz Hach
ORMAN: Optimal resolution of ambiguous RNA-Seq multimappings in the presence of novel isoforms. Bioinform. 30(5): 644-651 (2014) - [j11]Faraz Hach
mrsFAST-Ultra: a compact, SNP-aware mapper for high performance sequencing applications. Nucleic Acids Res. 42(Webserver-Issue): 494-500 (2014) - [j10]Ivan Iossifov, Brian J. O'Roak
The contribution of de novo coding mutations to autism spectrum disorder. Nat. 515(7526): 216-221 (2014) - 2012
- [j9]Farhad Hormozdiari, Faraz Hach
Sensitive and fast mapping of di-base encoded reads. Bioinform. 28(1): 150 (2012) - 2011
- [j8]Farhad Hormozdiari, Faraz Hach
Sensitive and fast mapping of di-base encoded reads. Bioinform. 27(14): 1915-1921 (2011) - [c5]Fereydoun Hormozdiari, Iman Hajirasouliha, Andrew W. McPherson, Evan E. Eichler, Süleyman Cenk Sahinalp:
Simultaneous Structural Variation Discovery in Multiple Paired-End Sequenced Genomes. RECOMB 2011: 104-105 - 2010
- [j7]Troy Zerr, Gregory M. Cooper, Evan E. Eichler, Deborah A. Nickerson:
Targeted interrogation of copy number variation using SCIMMkit. Bioinform. 26(1): 120-122 (2010) - [j6]Iman Hajirasouliha, Fereydoun Hormozdiari, Can Alkan
Detection and characterization of novel sequence insertions using paired-end next-generation sequencing. Bioinform. 26(10): 1277-1283 (2010) - [j5]Fereydoun Hormozdiari, Iman Hajirasouliha, Phuong Dao, Faraz Hach
Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery. Bioinform. 26(12): 350-357 (2010) - [c4]Can Alkan, Michael Brudno, Evan E. Eichler, Maricel G. Kann, Süleyman Cenk Sahinalp:
Session Introduction. Pacific Symposium on Biocomputing 2010: 302-304
2000 – 2009
- 2009
- [c3]Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, Süleyman Cenk Sahinalp:
Combinatorial Algorithms for Structural Variation Detection in High Throughput Sequenced Genomes. RECOMB 2009: 218-219 - 2007
- [j4]Can Alkan
Organization and Evolution of Primate Centromeric DNA from Whole-Genome Shotgun Sequence Data. PLoS Comput. Biol. 3(9) (2007) - 2005
- [j3]Can Alkan
Manipulating multiple sequence alignments via MaM and WebMaM. Nucleic Acids Res. 33(Web-Server-Issue): 295-298 (2005) - 2004
- [j2]Süleyman Cenk Sahinalp, Evan E. Eichler, Paul W. Goldberg
Identifying Uniformly Mutated Segments within Repeats. J. Bioinform. Comput. Biol. 2(4): 657-668 (2004) - [j1]Can Alkan, Evan E. Eichler, Jeffrey A. Bailey, Süleyman Cenk Sahinalp, Eray Tüzün
The Role of Unequal Crossover in Alpha-Satellite DNA Evolution: A Computational Analysis. J. Comput. Biol. 11(5): 933-944 (2004) - 2002
- [c2]Süleyman Cenk Sahinalp, Evan E. Eichler, Paul W. Goldberg
Statistical Identification of Uniformly Mutated Segments within Repeats. CPM 2002: 249-261 - [c1]Evan E. Eichler:
Recent duplication, evolution and assembly of the human genome. RECOMB 2002: 155-155
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