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Mattia D'Antonio
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2020 – today
- 2023
- [j9]Martina Betti, Chiara Maria Salzano, Alice Massacci, Mattia D'Antonio, Isabella Grassucci, Benedetta Marcozzi, Marco Canfora, Elisa Melucci, Simonetta Buglioni, Beatrice Casini, Enzo Gallo, Edoardo Pescarmona, Gennaro Ciliberto, Matteo Pallocca:
Development of a somatic variant registry in a National Cancer Center: towards Molecular Real World Data preparedness. J. Biomed. Informatics 142: 104394 (2023)
2010 – 2019
- 2017
- [j8]Bruno Fosso, Monica Santamaria, Mattia D'Antonio, Domenica Lovero, Giacomo Corrado, Enrico Vizza, N. Pássaro, Anna Rosa Garbuglia, M. R. Capobianchi, Marco Crescenzi, Gabriel Valiente, Graziano Pesole:
MetaShot: an accurate workflow for taxon classification of host-associated microbiome from shotgun metagenomic data. Bioinform. 33(11): 1730-1732 (2017) - [c4]Mattia D'Antonio, Paolo D'Onorio De Meo, Claudio Cacciari, Giuseppe Fiameni:
Characterization of Genomic Data Using Graph Databases. PARCO 2017: 423-432 - [c3]Simona Caraceni, Michele Carpenè, Mattia D'Antonio, Giuseppe Fiameni, Antonella Guidazzoli, Silvano Imboden, Maria Chiara Liguori, Margherita Montanari, Giuseppe Trotta, Gabriella Scipione, Davy Hanegreefs:
I-media-cities, a searchable platform on moving images with automatic and manual annotations. VSMM 2017: 1-8 - 2014
- [c2]Mattia D'Antonio, Paolo D'Onorio De Meo, Tiziana Castrignanò, Giovanni Erbacci, Matteo Pallocca, Graziano Pesole:
ODESSA: A high performance analysis pipeline for Ultra Deep targeted Exome Sequencing data. HPCS 2014: 608-615 - 2013
- [j7]Mattia D'Antonio, Paolo D'Onorio De Meo, Daniele Paoletti, Berardino Elmi, Matteo Pallocca, Nico Sanna, Ernesto Picardi, Graziano Pesole, Tiziana Castrignanò:
WEP: a high-performance analysis pipeline for whole-exome data. BMC Bioinform. 14(S-7): S11 (2013) - [j6]Matteo Giulietti, Francesco Piva, Mattia D'Antonio, Paolo D'Onorio De Meo, Daniele Paoletti, Tiziana Castrignanò, Anna Maria D'Erchia, Ernesto Picardi, Federico Zambelli, Giovanni Principato, Giulio Pavesi, Graziano Pesole:
SpliceAid-F: a database of human splicing factors and their RNA-binding sites. Nucleic Acids Res. 41(Database-Issue): 125-131 (2013) - 2012
- [j5]Paolo D'Onorio De Meo, Mattia D'Antonio, Francesca Griggio, Renato Lupi, Massimiliano Borsani, Giulio Pavesi, Tiziana Castrignanò, Graziano Pesole, Carmela Gissi:
MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa. Nucleic Acids Res. 40(Database-Issue): 1168-1172 (2012) - 2011
- [j4]Ernesto Picardi, Mattia D'Antonio, Danilo Carrabino, Tiziana Castrignanò, Graziano Pesole:
ExpEdit: a webserver to explore human RNA editing in RNA-Seq experiments. Bioinform. 27(9): 1311-1312 (2011) - [j3]Pier Luigi Martelli, Mattia D'Antonio, Paola Bonizzoni, Tiziana Castrignanò, Anna Maria D'Erchia, Paolo D'Onorio De Meo, Piero Fariselli, Michele Finelli, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Raffaella Rizzi, Ivan Rossi, Alessio Valletti, Andrea Zauli, Federico Zambelli, Rita Casadio, Graziano Pesole:
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing. Nucleic Acids Res. 39(Database-Issue): 80-85 (2011)
2000 – 2009
- 2009
- [j2]Francesco Chiani, Camilla Iannone, Rodolfo Negri, Daniele Paoletti, Mattia D'Antonio, Paolo D'Onorio De Meo, Tiziana Castrignanò:
Radiation Genes: a database devoted to microarrays screenings revealing transcriptome alterations induced by ionizing radiation in mammalian cells. Database J. Biol. Databases Curation 2009 (2009) - 2008
- [j1]Tiziana Castrignanò, Mattia D'Antonio, Anna Anselmo, Danilo Carrabino, A. D'Onorio De Meo, Anna Maria D'Erchia, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Alberto Riva, Raffaella Rizzi, Paola Bonizzoni, Graziano Pesole:
ASPicDB: A database resource for alternative splicing analysis. Bioinform. 24(10): 1300-1304 (2008) - [c1]Paolo D'Onorio De Meo, Danilo Carrabino, Mattia D'Antonio, Annarita D'Addabbo, Sabino Liuni, Flavio Mignone, Graziano Pesole, Nicola Ancona:
HT-RLS: High-Throughput Web Tool for Analysis of DNA Microarray Data Using RLS classifiers. CCGRID 2008: 747-752
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