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Declan P. O'Regan
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2020 – today
- 2024
- [j17]Melpomeni Kasapi, Kexin Xu, Timothy M. D. Ebbels, Declan P. O'Regan, James S. Ware, Joram M. Posma:
LAVASET: Latent Variable Stochastic Ensemble of Trees. An ensemble method for correlated datasets with spatial, spectral, and temporal dependencies. Bioinform. 40(3) (2024) - [j16]Mengyun Qiao, Shuo Wang, Huaqi Qiu, Antonio de Marvao, Declan P. O'Regan, Daniel Rueckert, Wenjia Bai:
CHeart: A Conditional Spatio-Temporal Generative Model for Cardiac Anatomy. IEEE Trans. Medical Imaging 43(3): 1259-1269 (2024) - [j15]Qingjie Meng, Wenjia Bai, Declan P. O'Regan, Daniel Rueckert:
DeepMesh: Mesh-Based Cardiac Motion Tracking Using Deep Learning. IEEE Trans. Medical Imaging 43(4): 1489-1500 (2024) - [c21]Siyi Du, Shaoming Zheng, Yinsong Wang, Wenjia Bai, Declan P. O'Regan, Chen Qin:
TIP: Tabular-Image Pre-training for Multimodal Classification with Incomplete Data. ECCV (15) 2024: 478-496 - [i21]Siyi Du, Shaoming Zheng, Yinsong Wang, Wenjia Bai, Declan P. O'Regan, Chen Qin:
TIP: Tabular-Image Pre-training for Multimodal Classification with Incomplete Data. CoRR abs/2407.07582 (2024) - [i20]Mengyun Qiao, Kathryn A. McGurk, Shuo Wang, Paul M. Matthews, Declan P. O'Regan, Wenjia Bai:
A Personalised 3D+t Mesh Generative Model for Unveiling Normal Heart Dynamics. CoRR abs/2409.13825 (2024) - 2023
- [j14]Simone Saitta, Ludovica Maga, Chlöe H. Armour, Emiliano Votta, Declan P. O'Regan, M. Yousuf Salmasi, Thanos Athanasiou, Jonathan W. Weinsaft, Xiao Yun Xu, Selene Pirola, Alberto Redaelli:
Data-driven generation of 4D velocity profiles in the aneurysmal ascending aorta. Comput. Methods Programs Biomed. 233: 107468 (2023) - [p1]Buntheng Ly, Mihaela Pop, Hubert Cochet, Nicolas Duchateau, Declan P. O'Regan, Maxime Sermesant:
Outcome Prediction. AI and Big Data in Cardiology 2023: 105-133 - [i19]Mengyun Qiao, Shuo Wang, Huaqi Qiu, Antonio de Marvao, Declan P. O'Regan, Daniel Rueckert, Wenjia Bai:
CHeart: A Conditional Spatio-Temporal Generative Model for Cardiac Anatomy. CoRR abs/2301.13098 (2023) - [i18]Qingjie Meng, Wenjia Bai, Declan P. O'Regan, Daniel Rueckert:
DeepMesh: Mesh-based Cardiac Motion Tracking using Deep Learning. CoRR abs/2309.14306 (2023) - 2022
- [j13]Xi Jia, Alexander Thorley, Wei Chen, Huaqi Qiu, Linlin Shen, Iain B. Styles, Hyung Jin Chang, Ales Leonardis, Antonio de Marvao, Declan P. O'Regan, Daniel Rueckert, Jinming Duan:
Learning a Model-Driven Variational Network for Deformable Image Registration. IEEE Trans. Medical Imaging 41(1): 199-212 (2022) - [j12]Qingjie Meng, Chen Qin, Wenjia Bai, Tianrui Liu, Antonio de Marvao, Declan P. O'Regan, Daniel Rueckert:
MulViMotion: Shape-Aware 3D Myocardial Motion Tracking From Multi-View Cardiac MRI. IEEE Trans. Medical Imaging 41(8): 1961-1974 (2022) - [c20]Qingjie Meng, Wenjia Bai, Tianrui Liu, Declan P. O'Regan, Daniel Rueckert:
Mesh-Based 3D Motion Tracking in Cardiac MRI Using Deep Learning. MICCAI (6) 2022: 248-258 - [i17]Qingjie Meng, Chen Qin, Wenjia Bai, Tianrui Liu, Antonio de Marvao, Declan P. O'Regan, Daniel Rueckert:
MulViMotion: Shape-aware 3D Myocardial Motion Tracking from Multi-View Cardiac MRI. CoRR abs/2208.00034 (2022) - [i16]Qingjie Meng, Wenjia Bai, Tianrui Liu, Declan P. O'Regan, Daniel Rueckert:
Mesh-based 3D Motion Tracking in Cardiac MRI using Deep Learning. CoRR abs/2209.02004 (2022) - [i15]Simone Saitta, Ludovica Maga, Chlöe H. Armour, Emiliano Votta, Declan P. O'Regan, M. Yousuf Salmasi, Thanos Athanasiou, Jonathan W. Weinsaft, Xiao Yun Xu, Selene Pirola, Alberto Redaelli:
Data-driven generation of 4D velocity profiles in the aneurysmal ascending aorta. CoRR abs/2211.00551 (2022) - 2021
- [c19]Shuo Wang, Chen Qin, Nicoló Savioli, Chen Chen, Declan P. O'Regan, Stuart A. Cook, Yike Guo, Daniel Rueckert, Wenjia Bai:
Joint Motion Correction and Super Resolution for Cardiac Segmentation via Latent Optimisation. MICCAI (3) 2021: 14-24 - [c18]Alexander Thorley, Xi Jia, Hyung Jin Chang, Boyang Liu, Karina Bunting, Victoria Stoll, Antonio de Marvao, Declan P. O'Regan, Georgios V. Gkoutos, Dipak Kotecha, Jinming Duan:
Nesterov Accelerated ADMM for Fast Diffeomorphic Image Registration. MICCAI (4) 2021: 150-160 - [i14]Xi Jia, Alexander Thorley, Wei Chen, Huaqi Qiu, Linlin Shen, Iain B. Styles, Hyung Jin Chang, Ales Leonardis, Antonio de Marvao, Declan P. O'Regan, Daniel Rueckert, Jinming Duan:
Learning a Model-Driven Variational Network for Deformable Image Registration. CoRR abs/2105.12227 (2021) - [i13]Shuo Wang, Chen Qin, Nicoló Savioli, Chen Chen, Declan P. O'Regan, Stuart A. Cook, Yike Guo, Daniel Rueckert, Wenjia Bai:
Joint Motion Correction and Super Resolution for Cardiac Segmentation via Latent Optimisation. CoRR abs/2107.03887 (2021) - [i12]Nicoló Savioli, Antonio de Marvao, Wenjia Bai, Shuo Wang, Stuart A. Cook, Calvin W. L. Chin, Daniel Rueckert, Declan P. O'Regan:
Joint Semi-supervised 3D Super-Resolution and Segmentation with Mixed Adversarial Gaussian Domain Adaptation. CoRR abs/2107.07975 (2021) - [i11]Alexander Thorley, Xi Jia, Hyung Jin Chang, Boyang Liu, Karina Bunting, Victoria Stoll, Antonio de Marvao, Declan P. O'Regan, Georgios V. Gkoutos, Dipak Kotecha, Jinming Duan:
Nesterov Accelerated ADMM for Fast Diffeomorphic Image Registration. CoRR abs/2109.12688 (2021) - 2020
- [j11]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Wenjia Bai, Antonio de Marvao, Ozan Oktay, Christian Ledig, Loïc Le Folgoc, Konstantinos Kamnitsas, Georgia Doumou, Jinming Duan, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Explainable Anatomical Shape Analysis Through Deep Hierarchical Generative Models. IEEE Trans. Medical Imaging 39(6): 2088-2099 (2020) - [c17]Weizeng Lu, Xi Jia, Wei Chen, Nicoló Savioli, Antonio de Marvao, Linlin Shen, Declan P. O'Regan, Jinming Duan:
One-stage Multi-task Detector for 3D Cardiac MR Imaging. ICPR 2020: 1949-1955
2010 – 2019
- 2019
- [j10]Ghalib A. Bello, Timothy J. W. Dawes, Jinming Duan, Carlo Biffi, Antonio de Marvao, Luke S. G. E. Howard, J. Simon R. Gibbs, Martin R. Wilkins, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan:
Deep-learning cardiac motion analysis for human survival prediction. Nat. Mach. Intell. 1(2): 95-104 (2019) - [j9]Giacomo Tarroni, Ozan Oktay, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Jonathan Passerat-Palmbach, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Ben Glocker, Paul M. Matthews, Daniel Rueckert:
Learning-Based Quality Control for Cardiac MR Images. IEEE Trans. Medical Imaging 38(5): 1127-1138 (2019) - [j8]Jinming Duan, Ghalib Bello, Jo Schlemper, Wenjia Bai, Timothy J. W. Dawes, Carlo Biffi, Antonio de Marvao, Georgia Doumou, Declan P. O'Regan, Daniel Rueckert:
Automatic 3D Bi-Ventricular Segmentation of Cardiac Images by a Shape-Refined Multi- Task Deep Learning Approach. IEEE Trans. Medical Imaging 38(9): 2151-2164 (2019) - [c16]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Antonio de Marvao, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
3D High-Resolution Cardiac Segmentation Reconstruction From 2D Views Using Conditional Variational Autoencoders. ISBI 2019: 1643-1646 - [c15]Jinming Duan, Jo Schlemper, Chen Qin, Cheng Ouyang, Wenjia Bai, Carlo Biffi, Ghalib Bello, Ben Statton, Declan P. O'Regan, Daniel Rueckert:
VS-Net: Variable Splitting Network for Accelerated Parallel MRI Reconstruction. MICCAI (4) 2019: 713-722 - [i10]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Antonio de Marvao, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
3D High-Resolution Cardiac Segmentation Reconstruction from 2D Views using Conditional Variational Autoencoders. CoRR abs/1902.11000 (2019) - [i9]Carlo Biffi, Juan J. Cerrolaza, Giacomo Tarroni, Wenjia Bai, Ozan Oktay, Loïc Le Folgoc, Konstantinos Kamnitsas, Antonio de Marvao, Georgia Doumou, Jinming Duan, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Explainable Shape Analysis through Deep Hierarchical Generative Models: Application to Cardiac Remodeling. CoRR abs/1907.00058 (2019) - [i8]Jinming Duan, Jo Schlemper, Chen Qin, Cheng Ouyang, Wenjia Bai, Carlo Biffi, Ghalib Bello, Ben Statton, Declan P. O'Regan, Daniel Rueckert:
VS-Net: Variable splitting network for accelerated parallel MRI reconstruction. CoRR abs/1907.10033 (2019) - [i7]Shihao Jin, Nicoló Savioli, Antonio de Marvao, Timothy J. W. Dawes, Axel Gandy, Daniel Rueckert, Declan P. O'Regan:
Joint analysis of clinical risk factors and 4D cardiac motion for survival prediction using a hybrid deep learning network. CoRR abs/1910.02951 (2019) - 2018
- [j7]Carlo Biffi, Antonio de Marvao, Mark I Attard, Timothy J. W. Dawes, Nicola Whiffin, Wenjia Bai, Wenzhe Shi, Catherine Francis, Hannah Meyer, Rachel J. Buchan, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan:
Three-dimensional cardiovascular imaging-genetics: a mass univariate framework. Bioinform. 34(1): 97-103 (2018) - [j6]Ozan Oktay, Enzo Ferrante, Konstantinos Kamnitsas, Mattias P. Heinrich, Wenjia Bai, Jose Caballero, Stuart A. Cook, Antonio de Marvao, Timothy Dawes, Declan P. O'Regan, Bernhard Kainz, Ben Glocker, Daniel Rueckert:
Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation. IEEE Trans. Medical Imaging 37(2): 384-395 (2018) - [c14]Jinming Duan, Jo Schlemper, Wenjia Bai, Timothy J. W. Dawes, Ghalib Bello, Carlo Biffi, Georgia Doumou, Antonio M. Simoes Monteiro de Marvao, Declan P. O'Regan, Daniel Rueckert:
Combining Deep Learning and Shape Priors for Bi-Ventricular Segmentation of Volumetric Cardiac Magnetic Resonance Images. ShapeMI@MICCAI 2018: 258-267 - [c13]Giacomo Tarroni, Ozan Oktay, Matthew Sinclair, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
A Comprehensive Approach for Learning-Based Fully-Automated Inter-slice Motion Correction for Short-Axis Cine Cardiac MR Image Stacks. MICCAI (1) 2018: 268-276 - [c12]Carlo Biffi, Ozan Oktay, Giacomo Tarroni, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao, Georgia Doumou, Martin Rajchl, Reem Bedair, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Learning Interpretable Anatomical Features Through Deep Generative Models: Application to Cardiac Remodeling. MICCAI (2) 2018: 464-471 - [c11]Jinming Duan, Jo Schlemper, Wenjia Bai, Timothy J. W. Dawes, Ghalib Bello, Georgia Doumou, Antonio M. Simoes Monteiro de Marvao, Declan P. O'Regan, Daniel Rueckert:
Deep Nested Level Sets: Fully Automated Segmentation of Cardiac MR Images in Patients with Pulmonary Hypertension. MICCAI (4) 2018: 595-603 - [i6]Carlo Biffi, Ozan Oktay, Giacomo Tarroni, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao, Georgia Doumou, Martin Rajchl, Reem Bedair, Sanjay K. Prasad, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Learning Interpretable Anatomical Features Through Deep Generative Models: Application to Cardiac Remodeling. CoRR abs/1807.06843 (2018) - [i5]Jinming Duan, Jo Schlemper, Wenjia Bai, Timothy J. W. Dawes, Ghalib Bello, Georgia Doumou, Antonio M. Simoes Monteiro de Marvao, Declan P. O'Regan, Daniel Rueckert:
Deep nested level sets: Fully automated segmentation of cardiac MR images in patients with pulmonary hypertension. CoRR abs/1807.10760 (2018) - [i4]Jinming Duan, Ghalib Bello, Jo Schlemper, Wenjia Bai, Timothy J. W. Dawes, Carlo Biffi, Antonio de Marvao, Georgia Doumou, Declan P. O'Regan, Daniel Rueckert:
Automatic 3D bi-ventricular segmentation of cardiac images by a shape-constrained multi-task deep learning approach. CoRR abs/1808.08578 (2018) - [i3]Giacomo Tarroni, Ozan Oktay, Matthew Sinclair, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
A Comprehensive Approach for Learning-based Fully-Automated Inter-slice Motion Correction for Short-Axis Cine Cardiac MR Image Stacks. CoRR abs/1810.02201 (2018) - [i2]Ghalib A. Bello, Timothy J. W. Dawes, Jinming Duan, Carlo Biffi, Antonio de Marvao, Luke S. G. E. Howard, J. Simon R. Gibbs, Martin R. Wilkins, Stuart A. Cook, Daniel Rueckert, Declan P. O'Regan:
Deep learning cardiac motion analysis for human survival prediction. CoRR abs/1810.03382 (2018) - 2017
- [j5]Ozan Oktay, Wenjia Bai, Ricardo Guerrero, Martin Rajchl, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Mattias P. Heinrich, Ben Glocker, Daniel Rueckert:
Stratified Decision Forests for Accurate Anatomical Landmark Localization in Cardiac Images. IEEE Trans. Medical Imaging 36(1): 332-342 (2017) - [c10]Giacomo Tarroni, Ozan Oktay, Wenjia Bai, Andreas Schuh, Hideaki Suzuki, Jonathan Passerat-Palmbach, Ben Glocker, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
Learning-Based Heart Coverage Estimation for Short-Axis Cine Cardiac MR Images. FIMH 2017: 73-82 - [i1]Ozan Oktay, Enzo Ferrante, Konstantinos Kamnitsas, Mattias P. Heinrich, Wenjia Bai, Jose Caballero, Ricardo Guerrero, Stuart A. Cook, Antonio de Marvao, Timothy Dawes, Declan P. O'Regan, Bernhard Kainz, Ben Glocker, Daniel Rueckert:
Anatomically Constrained Neural Networks (ACNN): Application to Cardiac Image Enhancement and Segmentation. CoRR abs/1705.08302 (2017) - 2016
- [c9]Ozan Oktay, Giacomo Tarroni, Wenjia Bai, Antonio de Marvao, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
Respiratory Motion Correction for 2D Cine Cardiac MR Images using Probabilistic Edge Maps. CinC 2016 - [c8]Ozan Oktay, Wenjia Bai, Matthew C. H. Lee, Ricardo Guerrero, Konstantinos Kamnitsas, Jose Caballero, Antonio de Marvao, Stuart A. Cook, Declan P. O'Regan, Daniel Rueckert:
Multi-input Cardiac Image Super-Resolution Using Convolutional Neural Networks. MICCAI (3) 2016: 246-254 - 2015
- [j4]Wenjia Bai, Wenzhe Shi, Antonio M. Simoes Monteiro de Marvao, Timothy J. W. Dawes, Declan P. O'Regan, Stuart A. Cook, Daniel Rueckert:
A bi-ventricular cardiac atlas built from 1000+ high resolution MR images of healthy subjects and an analysis of shape and motion. Medical Image Anal. 26(1): 133-145 (2015) - [c7]Wenjia Bai, Devis Peressutti, Ozan Oktay, Wenzhe Shi, Declan P. O'Regan, Andrew P. King, Daniel Rueckert:
Learning a Global Descriptor of Cardiac Motion from a Large Cohort of 1000+ Normal Subjects. FIMH 2015: 3-11 - [c6]Haiyan Wang, Wenzhe Shi, Wenjia Bai, Antonio M. Simoes Monteiro de Marvao, Timothy J. W. Dawes, Declan P. O'Regan, Philip J. Edwards, Stuart A. Cook, Daniel Rueckert:
Prediction of Clinical Information from Cardiac MRI Using Manifold Learning. FIMH 2015: 91-98 - [c5]Wenjia Bai, Devis Peressutti, Sarah Parisot, Ozan Oktay, Martin Rajchl, Declan P. O'Regan, Stuart A. Cook, Andrew P. King, Daniel Rueckert:
Beyond the AHA 17-Segment Model: Motion-Driven Parcellation of the Left Ventricle. STACOM@MICCAI 2015: 13-20 - 2014
- [c4]Wenzhe Shi, Herve Lombaert, Wenjia Bai, Christian Ledig, Xiahai Zhuang, Antonio M. Simoes Monteiro de Marvao, Timothy Dawes, Declan P. O'Regan, Daniel Rueckert:
Multi-atlas Spectral PatchMatch: Application to Cardiac Image Segmentation. MICCAI (1) 2014: 348-355 - 2013
- [j3]Mark Woodbridge, Gianlorenzo Fagiolo, Declan P. O'Regan:
MRIdb: Medical Image Management for Biobank Research. J. Digit. Imaging 26(5): 886-890 (2013) - [j2]Wenzhe Shi, Martin Jantsch, Paul Aljabar, Luis Pizarro, Wenjia Bai, Haiyan Wang, Declan P. O'Regan, Xiahai Zhuang, Daniel Rueckert:
Temporal sparse free-form deformations. Medical Image Anal. 17(7): 779-789 (2013) - [j1]Wenjia Bai, Wenzhe Shi, Declan P. O'Regan, Tong Tong, Haiyan Wang, Shahnaz Jamil-Copley, Nicholas S. Peters, Daniel Rueckert:
A Probabilistic Patch-Based Label Fusion Model for Multi-Atlas Segmentation With Registration Refinement: Application to Cardiac MR Images. IEEE Trans. Medical Imaging 32(7): 1302-1315 (2013) - [c3]Wenzhe Shi, Jose Caballero, Christian Ledig, Xiahai Zhuang, Wenjia Bai, Kanwal K. Bhatia, Antonio M. Simoes Monteiro de Marvao, Tim Dawes, Declan P. O'Regan, Daniel Rueckert:
Cardiac Image Super-Resolution with Global Correspondence Using Multi-Atlas PatchMatch. MICCAI (3) 2013: 9-16 - 2012
- [c2]Stefan Pszczólkowski, Luis Pizarro, Declan P. O'Regan, Daniel Rueckert:
Gradient Projection Learning for Parametric Nonrigid Registration. MLMI 2012: 226-233 - 2011
- [c1]Wenzhe Shi, Xiahai Zhuang, Haiyan Wang, Simon G. Duckett, Declan P. O'Regan, Philip J. Edwards, Sébastien Ourselin, Daniel Rueckert:
Automatic Segmentation of Different Pathologies from Cardiac Cine MRI Using Registration and Multiple Component EM Estimation. FIMH 2011: 163-170
Coauthor Index
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