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Geo Pertea
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2020 – today
- 2022
- [j8]Alaina Shumate
, Brandon M. Wong
Improved transcriptome assembly using a hybrid of long and short reads with StringTie. PLoS Comput. Biol. 18(6) (2022) - 2021
- [j7]Ales Varabyou
TieBrush: an efficient method for aggregating and summarizing mapped reads across large datasets. Bioinform. 37(20): 3650-3651 (2021)
2010 – 2019
- 2011
- [j6]Mihaela Pertea
Detection of Lineage-Specific Evolutionary Changes among Primate Species. BMC Bioinform. 12: 274 (2011)
2000 – 2009
- 2006
- [j5]Agnes P. Chan
The TIGR Maize Database. Nucleic Acids Res. 34(Database-Issue): 771-776 (2006) - 2005
- [j4]Yuandan Lee, Jennifer Tsai, S. Sunkara, Svetlana Karamycheva, Geo Pertea, Razvan Sultana, Valentin Antonescu, Agnes P. Chan, Foo Cheung, John Quackenbush
The TIGR Gene Indices: clustering and assembling EST and known genes and integration with eukaryotic genomes. Nucleic Acids Res. 33(Database-Issue): 71-74 (2005) - 2004
- [c1]Xiequn Xu, William Bradley Barbazuk, Yucheng Feng, Karel Schubert, Agnes P. Chan, Geo Pertea, Li Zheng, Foo Cheung, Yuandan Lee:
Gene Recovery of Two Genome-Filtration Sequencing Techniques When Applied to the Maize Genome. CSB 2004: 594-595 - 2003
- [j3]Geo Pertea, Xiaoqiu Huang, Feng Liang, Valentin Antonescu, Razvan Sultana, Svetlana Karamycheva, Yuandan Lee, Joseph White, Foo Cheung, Babak Parvizi, Jennifer Tsai, John Quackenbush
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. Bioinform. 19(5): 651-652 (2003) - 2001
- [j2]John Quackenbush
The TIGR Gene Indices: analysis of gene transcript sequences in highly sampled eukaryotic species. Nucleic Acids Res. 29(1): 159-164 (2001) - 2000
- [j1]John Quackenbush
The TIGR Gene Indices: reconstruction and representation of expressed gene sequences. Nucleic Acids Res. 28(1): 141-145 (2000)
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