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Raul Rabadan
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2020 – today
- 2024
- [i7]Jiayu Su, David A. Knowles, Raul Rabadan:
Disentangling Interpretable Factors with Supervised Independent Subspace Principal Component Analysis. CoRR abs/2410.23595 (2024) - 2022
- [j13]Wesley Tansey
, Victor Veitch, Haoran Zhang
The Holdout Randomization Test for Feature Selection in Black Box Models. J. Comput. Graph. Stat. 31(1): 151-162 (2022) - 2021
- [i6]Michael Bleher, Lukas Hahn, Juan Ángel Patino-Galindo, Mathieu Carrière, Ulrich Bauer, Raul Rabadan, Andreas Ott:
Topology identifies emerging adaptive mutations in SARS-CoV-2. CoRR abs/2106.07292 (2021) - 2020
- [j12]Rose Orenbuch
arcasHLA: high-resolution HLA typing from RNAseq. Bioinform. 36(1): 33-40 (2020) - [j11]Luis C. Aparicio
A Random Matrix Theory Approach to Denoise Single-Cell Data. Patterns 1(3): 100035 (2020) - [j10]Michael Lesnick, Raúl Rabadán, Daniel I. S. Rosenbloom:
Quantifying Genetic Innovation: Mathematical Foundations for the Topological Study of Reticulate Evolution. SIAM J. Appl. Algebra Geom. 4(1): 141-184 (2020) - [c8]Andrew Aukerman
Persistent Homology Based Characterization of the Breast Cancer Immune Microenvironment: A Feasibility Study. SoCG 2020: 11:1-11:20 - [i5]Andrew J. Blumberg, Mathieu Carrière, Michael A. Mandell, Raul Rabadan, Soledad Villar:
MREC: a fast and versatile framework for aligning and matching point clouds with applications to single cell molecular data. CoRR abs/2001.01666 (2020)
2010 – 2019
- 2019
- [j9]Floris P. Barthel
Longitudinal molecular trajectories of diffuse glioma in adults. Nat. 576(7785): 112-120 (2019) - 2018
- [c7]Wesley Tansey, Yixin Wang, David M. Blei, Raul Rabadan:
Black Box FDR. ICML 2018: 4874-4883 - [i4]Michael Lesnick, Raúl Rabadán, Daniel I. S. Rosenbloom:
Quantifying Genetic Innovation: Mathematical Foundations for the Topological Study of Reticulate Evolution. CoRR abs/1804.01398 (2018) - [i3]Wesley Tansey, Yixin Wang, David M. Blei, Raul Rabadan:
Black Box FDR. CoRR abs/1806.03143 (2018) - [i2]Mathieu Carrière, Raul Rabadan:
Topological Data Analysis of Single-cell Hi-C Contact Maps. CoRR abs/1812.01360 (2018) - 2016
- [j8]Pablo G. Cámara, Arnold J. Levine, Raúl Rabadán
Inference of Ancestral Recombination Graphs through Topological Data Analysis. PLoS Comput. Biol. 12(8) (2016) - [i1]Guido D'Amico, Raul Rabadan, Matthew Kleban
A Theory of Taxonomy. CoRR abs/1611.03890 (2016) - 2015
- [c6]Kevin J. Emmett, Benjamin Schweinhart, Raul Rabadan:
Multiscale Topology of Chromatin Folding. BICT 2015: 177-180 - [c5]Kevin J. Emmett, Raul Rabadan:
Quantifying Reticulation in Phylogenetic Complexes Using Homology. BICT 2015: 193-196 - [c4]Andrew X. Chen
A Fast Semi-Automatic Segmentation Tool for Processing Brain Tumor Images. BIRS-IMLKE 2015: 170-181 - 2014
- [j7]Rachel D. Melamed
Data-driven discovery of seasonally linked diseases from an Electronic Health Records system. BMC Bioinform. 15(S-6): S3 (2014) - [j6]Francesco Abate, Sakellarios Zairis, Elisa Ficarra
Pegasus: a comprehensive annotation and prediction tool for detection of driver gene fusions in cancer. BMC Syst. Biol. 8: 97 (2014) - [c3]Sakellarios Zairis, Hossein Khiabanian
Moduli Spaces of Phylogenetic Trees Describing Tumor Evolutionary Patterns. Brain Informatics and Health 2014: 528-539 - [c2]Kevin J. Emmett, Raul Rabadan
Characterizing Scales of Genetic Recombination and Antibiotic Resistance in Pathogenic Bacteria Using Topological Data Analysis. Brain Informatics and Health 2014: 540-551 - [c1]Andreas Holzinger
Darwin, Lamarck, or Baldwin: Applying Evolutionary Algorithms to Machine Learning Techniques. WI-IAT (1) 2014: 449-453 - [p1]Katharina Holzinger
Darwin or Lamarck? Future Challenges in Evolutionary Algorithms for Knowledge Discovery and Data Mining. Interactive Knowledge Discovery and Data Mining in Biomedical Informatics 2014: 35-56 - 2013
- [j5]Vladimir Trifonov, Laura Pasqualucci, Riccardo Dalla Favera, Raul Rabadan
MutComFocal: an integrative approach to identifying recurrent and focal genomic alterations in tumor samples. BMC Syst. Biol. 7: 25 (2013) - [j4]Vladimir Trifonov
SAVI: a statistical algorithm for variant frequency identification. BMC Syst. Biol. 7(S-2): S2 (2013) - 2012
- [j3]Santiago Vilar
Drug-drug interaction through molecular structure similarity analysis. J. Am. Medical Informatics Assoc. 19(6): 1066-1074 (2012) - 2011
- [j2]Santiago Vilar
Facilitating adverse drug event detection in pharmacovigilance databases using molecular structure similarity: application to rhabdomyolysis. J. Am. Medical Informatics Assoc. 18(Supplement): 73-80 (2011) - 2010
- [j1]Joseph Chan
Network Analysis of Global Influenza Spread. PLoS Comput. Biol. 6(11) (2010)
Coauthor Index
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