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Advances in Bioinformatics and Its Applications, 2005
- Matthew He, Giri Narasimhan, Sergei V. Petoukhov:
Advances in Bioinformatics and Its Applications. Series in mathematical biology and medicine 8, World Scientific 2005, ISBN 978-981-256-148-0 - Steven A. Eschrich, Craig A. Beam:
Microarray Normalization using proportional abundance. - Young Bun Kim, Jung Hun Oh, Jean Gao:
Emerging Pattern based subspace Clustering of microarray gene expression Data using Mixture Models. - R. Nigam, S. Liang:
Thermodynamic Feasibility of metabolic Networks. - PhuongAn Dam, Zhengchang Su, Victor Olman, Ying Xu:
Computational Reconstruction of the carbon fixation pathway in Synechococcus SP. Wh 8102. - Youlian Pan
, Christoph W. Sensen:
Modular Neural Networks and their Application in exon Prediction. - Pinglang Wang, Manhong Dai, Robert C. Thompson, Stanley J. Watson, Fan Meng:
Gene Definition in Different Databases and its Implication in microarray Data Interpretation. - Yongjia Wang, Stanley J. Watson, Fan Meng:
Exploring Important Issues in the Implementation of gene Set Enrichment Analysis. - Chengyong Yang, Erliang Zeng, Kalai Mathee
Querying a Database of regulatory Elements. - Kaja M. Abbas
Computational Epidemiology: Bayesian disease Surveillance. - Rakhi Bhattacharyya, B. Mukhopadhyay:
Non-equilibrium fluctuations in a stochastic plankton Model: periodicity of phytoplankton Bloom. - Niranjan P. Bidargaddi, Madhu Chetty, Joarder Kamruzzaman:
Fuzzy decoding in Profile Hidden Markov Models for protein family identification. - Manhong Dai, Yongjia Wang, Elzbieta Sliwerska, Margit Burmeister, Stanley J. Watson, Huda Akil, Fan Meng:
Screening potential allele-frequency disequilibrium in Data from Affymetrix gene expression Arrays. - Hiroshi Dozono, Shigeomi Hara, Hisao Tokushima, Yoshio Noguchi:
The Application of Self Organizing Maps for the analyses of DNA sequences. - Sei-Hyung Lee, Karen M. Daniels:
Gaussian Kernel Width Generator for Support Vector Clustering. - Ying Liu:
Serum proteomic Pattern Analysis for Early cancer Detection. - Yunkai Liu, Cun-Quan Zhang:
A linear solution for haplotype Perfect Phylogeny Problem (Extended Abstract). - Tianhua Niu:
In silico Biology: haplotype Inference, Linkage disequilibrium Analysis, and microarray-based gene Selection Techniques. - Chia Huey Ooi
The Role of Feature Redundancy in tumor Classification. - Hatice Gulcin Ozer, Jingchun Chen, Fa Zhang, Bo Yuan:
Clustering of eukaryotic orthologs based on sequence and Domain Similarities using the Markov Graph-Flow Algorithm. - Kishore R. Sakharkar, Chandra Verma, Meena Kishore Sakharkar, Vincent T. K. Chow:
Rapid drug target identification in microbial genomes - an in silico Approach with Special Reference to Salmonella species. - Muhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence Dooley:
A Collimator Neural Network Model for the Classification of Genetic Data. - Yanli Sun, Zhengyue Deng, Giri Narasimhan
Training Set Design for Pattern Discovery with Applications to protein Motif Detection. - Jianhua Xuan, Yibin Dong, Javed I. Khan, Robert Clarke, Eric P. Hoffman, Yue Wang:
Gene Selection by Weighted Fisher criterion for Multiclass Prediction. - Mary Qu Yang, Okan K. Ersoy, Jack Y. Yang:
Sequential bifurcation Approach to Learning protein Functional Classes. - Chia-Yu Yen, Krzysztof J. Cios, Mark W. Duncan:
Identification of contaminants in MALDI-ToF proteomics spectra via Data Mining. - Gaolin Zheng, Renold Capocasale, Bernard Amegadzie, Peter J. Bugelski, Jin Lu:
Analysis of the effects of recombinant Human erythropoietin (EPO) on murine bone marrow populations using Mixture Modeling Techniques. - Wei Zhong, Gulsah Altun, Robert W. Harrison, Phang C. Tai, Yi Pan:
Discovery of Local protein sequence motifs using Improved k-means Clustering Technique. - Leonardo Bobadilla
Predicting and Characterizing metal-binding sites using Support Vector Machines. - Feng Cui, Tauqir Bibi, Zhijun Wu:
Mtmm - a MATLAB Toolbox for macromolecular Modeling. - Ovidiu Daescu, J. Luo:
Stabbing Balls and Simplifying proteins. - David W. Digby, William Seffens:
Step-Wise mutations of mRNA sequences lead to Progressive changes in calculated Folding Free energies. - Ofer H. Gill, Yi Zhou, Bud Mishra:
Aligning sequences with non-Affine Gap penalty: Plains Algorithm, a Practical Implementation, and its biological Applications in Comparative genomics. - Jing He, Yonggang Lu:
Using the Length Constraints of Helix to Evaluate protein secondary Structure Prediction for Helix. - Katrin Kupas, Alfred Ultsch, Gerhard Klebe:
An Algorithm for Finding Similarities in protein Active sites. - Yaohang Li, Charlie E. M. Strauss, Andrey Gorin:
Parallel tempering in Rosetta Practice. - Tom Milledge, Gaolin Zheng, Giri Narasimhan
An Application of Association Rule Mining to HLA-a*0201 epitope Prediction. - Jung Hun Oh
A two-Way Searching Algorithm for de novo peptide sequencing via tandem mass spectrometry. - B. Shan, K. Zhang, B. Ma, C. Zhang, G. Lajoie:
An Algorithm for determining glycan Structures from MS/MS spectra. - Meera Sitharam, Miklós Bóna:
Counting and Enumeration of Self-assembly pathways for Symmetric macromolecular Structures. - Jingyi Yang, Jitender S. Deogun:
Improving Multiple whole genome Alignment by considering Rearrangement. - Kihoon Yoon, Stephen Kwek:
A filtering Approach to splice Site Predictions in Human genes. - Fa Zhang, Jingchun Chen, Zhiyong Liu, Bo Yuan:
The Construction of Structural Templates for the Modeling of conserved protein Domains. - Miguel A. Jiménez-Montaño:
Applications of Hyper Genetic Code to Bioinformatics. - Vladimir A. Karasev, V. V. Luchinin, Vasiliy E. Stefanov:
A dodecahedron-based Model of Spatial Representation of the Canonical Set of amino acids. - Dónall A. Mac Dónaill:
Molecular mappings: Group Theory, coding Theory, and the Emergence of Replication. - Tidjani Négadi:
Symmetry and Information in the Genetic Code. - Sergei V. Petoukhov:
The Rules of Degeneracy and Segregations in Genetic codes - the Chronocyclic conception and Parallels with Mendel's Laws. - Nikola Stambuk, Pasko Konjevoda, Nikola Gotovac:
Symbolic coding of amino acid and nucleotide Properties. - Raisa Szabo, Mattew He, Erick Burnham, Jessica Jurani:
Analysing Patterns of tripeptides using Statistical Approach and Neural Network Paradigm. - Chi-Ming Yang:
Molecular versus Atomic Information Logic behind the Genetic coding Contents constrained by two Evolutionary Axes and the Fibonacci-Lucas sequence. - J. Gualberto Cremades, Maria Tito, Malek Adjouadi
Use of EEG recordings as Valid Measures of kinesthetic and Visual imagery Ability. - Aba-Sah Dadzie, Albert Burger:
The Merits of the Third Dimension for Visual Analysis of Multiple Anatomy Ontologies. - Michel Mourad, Malek Adjouadi
Localization of brain activation through Integration of optical topography and magnetic resonance imaging. - Pierre-Emmanuel Gros, Nicolas Férey, Joan Hérisson, Rachid Gherbi:
A Distributed Multimedia Database Visualization within an Immersive Environment for Bioinformatics.
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