%0 Conference Proceedings
%T Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%E Lavelli, Alberto
%E Minard, Anne-Lyse
%E Rinaldi, Fabio
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F ws-2018-international-health
%U https://aclanthology.org/W18-5600/

%0 Conference Proceedings
%T Detecting Diabetes Risk from Social Media Activity
%A Bell, Dane
%A Laparra, Egoitz
%A Kousik, Aditya
%A Ishihara, Terron
%A Surdeanu, Mihai
%A Kobourov, Stephen
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F bell-etal-2018-detecting
%R 10.18653/v1/W18-5601
%U https://aclanthology.org/W18-5601/
%U https://doi.org/10.18653/v1/W18-5601
%P 1-11

%0 Conference Proceedings
%T Treatment Side Effect Prediction from Online User-generated Content
%A Nguyen, Van Hoang
%A Sugiyama, Kazunari
%A Kan, Min-Yen
%A Halder, Kishaloy
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F nguyen-etal-2018-treatment
%R 10.18653/v1/W18-5602
%U https://aclanthology.org/W18-5602/
%U https://doi.org/10.18653/v1/W18-5602
%P 12-21

%0 Conference Proceedings
%T Revisiting neural relation classification in clinical notes with external information
%A Šuster, Simon
%A Sushil, Madhumita
%A Daelemans, Walter
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F suster-etal-2018-revisiting
%R 10.18653/v1/W18-5603
%U https://aclanthology.org/W18-5603/
%U https://doi.org/10.18653/v1/W18-5603
%P 22-28

%0 Conference Proceedings
%T Supervised Machine Learning for Extractive Query Based Summarisation of Biomedical Data
%A Kaur, Mandeep
%A Mollá, Diego
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F kaur-molla-2018-supervised
%R 10.18653/v1/W18-5604
%U https://aclanthology.org/W18-5604/
%U https://doi.org/10.18653/v1/W18-5604
%P 29-37

%0 Conference Proceedings
%T Comparing CNN and LSTM character-level embeddings in BiLSTM-CRF models for chemical and disease named entity recognition
%A Zhai, Zenan
%A Nguyen, Dat Quoc
%A Verspoor, Karin
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F zhai-etal-2018-comparing
%R 10.18653/v1/W18-5605
%U https://aclanthology.org/W18-5605/
%U https://doi.org/10.18653/v1/W18-5605
%P 38-43

%0 Conference Proceedings
%T Deep learning for language understanding of mental health concepts derived from Cognitive Behavioural Therapy
%A Rojas-Barahona, Lina M.
%A Tseng, Bo-Hsiang
%A Dai, Yinpei
%A Mansfield, Clare
%A Ramadan, Osman
%A Ultes, Stefan
%A Crawford, Michael
%A Gašić, Milica
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F rojas-barahona-etal-2018-deep
%R 10.18653/v1/W18-5606
%U https://aclanthology.org/W18-5606/
%U https://doi.org/10.18653/v1/W18-5606
%P 44-54

%0 Conference Proceedings
%T Investigating the Challenges of Temporal Relation Extraction from Clinical Text
%A Galvan, Diana
%A Okazaki, Naoaki
%A Matsuda, Koji
%A Inui, Kentaro
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F galvan-etal-2018-investigating
%R 10.18653/v1/W18-5607
%U https://aclanthology.org/W18-5607/
%U https://doi.org/10.18653/v1/W18-5607
%P 55-64

%0 Conference Proceedings
%T De-identifying Free Text of Japanese Dummy Electronic Health Records
%A Kajiyama, Kohei
%A Horiguchi, Hiromasa
%A Okumura, Takashi
%A Morita, Mizuki
%A Kano, Yoshinobu
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F kajiyama-etal-2018-de
%R 10.18653/v1/W18-5608
%U https://aclanthology.org/W18-5608/
%U https://doi.org/10.18653/v1/W18-5608
%P 65-70

%0 Conference Proceedings
%T Unsupervised Identification of Study Descriptors in Toxicology Research: An Experimental Study
%A Herrmannova, Drahomira
%A Young, Steven
%A Patton, Robert
%A Stahl, Christopher
%A Kleinstreuer, Nicole
%A Wolfe, Mary
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F herrmannova-etal-2018-unsupervised
%R 10.18653/v1/W18-5609
%U https://aclanthology.org/W18-5609/
%U https://doi.org/10.18653/v1/W18-5609
%P 71-82

%0 Conference Proceedings
%T Identification of Parallel Sentences in Comparable Monolingual Corpora from Different Registers
%A Cardon, Rémi
%A Grabar, Natalia
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F cardon-grabar-2018-identification
%R 10.18653/v1/W18-5610
%U https://aclanthology.org/W18-5610/
%U https://doi.org/10.18653/v1/W18-5610
%P 83-93

%0 Conference Proceedings
%T Evaluation of a Prototype System that Automatically Assigns Subject Headings to Nursing Narratives Using Recurrent Neural Network
%A Moen, Hans
%A Hakala, Kai
%A Peltonen, Laura-Maria
%A Suhonen, Henry
%A Loukasmäki, Petri
%A Salakoski, Tapio
%A Ginter, Filip
%A Salanterä, Sanna
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F moen-etal-2018-evaluation
%R 10.18653/v1/W18-5611
%U https://aclanthology.org/W18-5611/
%U https://doi.org/10.18653/v1/W18-5611
%P 94-100

%0 Conference Proceedings
%T Automatically Detecting the Position and Type of Psychiatric Evaluation Report Sections
%A Banisakher, Deya
%A Rishe, Naphtali
%A Finlayson, Mark A.
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F banisakher-etal-2018-automatically
%R 10.18653/v1/W18-5612
%U https://aclanthology.org/W18-5612/
%U https://doi.org/10.18653/v1/W18-5612
%P 101-110

%0 Conference Proceedings
%T Iterative development of family history annotation guidelines using a synthetic corpus of clinical text
%A Rama, Taraka
%A Brekke, Pål
%A Nytrø, Øystein
%A Øvrelid, Lilja
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F rama-etal-2018-iterative
%R 10.18653/v1/W18-5613
%U https://aclanthology.org/W18-5613/
%U https://doi.org/10.18653/v1/W18-5613
%P 111-121

%0 Conference Proceedings
%T CAS: French Corpus with Clinical Cases
%A Grabar, Natalia
%A Claveau, Vincent
%A Dalloux, Clément
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F grabar-etal-2018-cas
%R 10.18653/v1/W18-5614
%U https://aclanthology.org/W18-5614/
%U https://doi.org/10.18653/v1/W18-5614
%P 122-128

%0 Conference Proceedings
%T Analysis of Risk Factor Domains in Psychosis Patient Health Records
%A Holderness, Eben
%A Miller, Nicholas
%A Bolton, Kirsten
%A Cawkwell, Philip
%A Meteer, Marie
%A Pustejovsky, James
%A Hua-Hall, Mei
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F holderness-etal-2018-analysis
%R 10.18653/v1/W18-5615
%U https://aclanthology.org/W18-5615/
%U https://doi.org/10.18653/v1/W18-5615
%P 129-138

%0 Conference Proceedings
%T Patient Risk Assessment and Warning Symptom Detection Using Deep Attention-Based Neural Networks
%A Girardi, Ivan
%A Ji, Pengfei
%A Nguyen, An-phi
%A Hollenstein, Nora
%A Ivankay, Adam
%A Kuhn, Lorenz
%A Marchiori, Chiara
%A Zhang, Ce
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F girardi-etal-2018-patient
%R 10.18653/v1/W18-5616
%U https://aclanthology.org/W18-5616/
%U https://doi.org/10.18653/v1/W18-5616
%P 139-148

%0 Conference Proceedings
%T Syntax-based Transfer Learning for the Task of Biomedical Relation Extraction
%A Legrand, Joël
%A Toussaint, Yannick
%A Raïssi, Chedy
%A Coulet, Adrien
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F legrand-etal-2018-syntax
%R 10.18653/v1/W18-5617
%U https://aclanthology.org/W18-5617/
%U https://doi.org/10.18653/v1/W18-5617
%P 149-159

%0 Conference Proceedings
%T In-domain Context-aware Token Embeddings Improve Biomedical Named Entity Recognition
%A Sheikhshabbafghi, Golnar
%A Birol, Inanc
%A Sarkar, Anoop
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F sheikhshabbafghi-etal-2018-domain
%R 10.18653/v1/W18-5618
%U https://aclanthology.org/W18-5618/
%U https://doi.org/10.18653/v1/W18-5618
%P 160-164

%0 Conference Proceedings
%T Self-training improves Recurrent Neural Networks performance for Temporal Relation Extraction
%A Lin, Chen
%A Miller, Timothy
%A Dligach, Dmitriy
%A Amiri, Hadi
%A Bethard, Steven
%A Savova, Guergana
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F lin-etal-2018-self
%R 10.18653/v1/W18-5619
%U https://aclanthology.org/W18-5619/
%U https://doi.org/10.18653/v1/W18-5619
%P 165-176

%0 Conference Proceedings
%T Listwise temporal ordering of events in clinical notes
%A Jeblee, Serena
%A Hirst, Graeme
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F jeblee-hirst-2018-listwise
%R 10.18653/v1/W18-5620
%U https://aclanthology.org/W18-5620/
%U https://doi.org/10.18653/v1/W18-5620
%P 177-182

%0 Conference Proceedings
%T Time Expressions in Mental Health Records for Symptom Onset Extraction
%A Viani, Natalia
%A Yin, Lucia
%A Kam, Joyce
%A Alawi, Ayunni
%A Bittar, André
%A Dutta, Rina
%A Patel, Rashmi
%A Stewart, Robert
%A Velupillai, Sumithra
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F viani-etal-2018-time
%R 10.18653/v1/W18-5621
%U https://aclanthology.org/W18-5621/
%U https://doi.org/10.18653/v1/W18-5621
%P 183-192

%0 Conference Proceedings
%T Evaluation of a Sequence Tagging Tool for Biomedical Texts
%A Tourille, Julien
%A Doutreligne, Matthieu
%A Ferret, Olivier
%A Névéol, Aurélie
%A Paris, Nicolas
%A Tannier, Xavier
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F tourille-etal-2018-evaluation
%R 10.18653/v1/W18-5622
%U https://aclanthology.org/W18-5622/
%U https://doi.org/10.18653/v1/W18-5622
%P 193-203

%0 Conference Proceedings
%T Learning to Summarize Radiology Findings
%A Zhang, Yuhao
%A Ding, Daisy Yi
%A Qian, Tianpei
%A Manning, Christopher D.
%A Langlotz, Curtis P.
%Y Lavelli, Alberto
%Y Minard, Anne-Lyse
%Y Rinaldi, Fabio
%S Proceedings of the Ninth International Workshop on Health Text Mining and Information Analysis
%D 2018
%8 October
%I Association for Computational Linguistics
%C Brussels, Belgium
%F zhang-etal-2018-learning-summarize
%R 10.18653/v1/W18-5623
%U https://aclanthology.org/W18-5623/
%U https://doi.org/10.18653/v1/W18-5623
%P 204-213