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CAMK2B calcium/calmodulin dependent protein kinase II beta [ Sceloporus undulatus (fence lizard) ]

Gene ID: 121935466, updated on 18-Sep-2024

Summary

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Gene symbol
CAMK2B
Gene description
calcium/calmodulin dependent protein kinase II beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Sceloporus undulatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Phrynosomatidae; Phrynosomatinae; Sceloporus
Orthologs
human mouse all
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Genomic context

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See CAMK2B in Genome Data Viewer
Location:
chromosome: 6
Exon count:
26
Annotation release Status Assembly Chr Location
100 current SceUnd_v1.1 (GCF_019175285.1) 6 NC_056527.1 (128859437..129024596)

Chromosome 6 - NC_056527.1Genomic Context describing neighboring genes Neighboring gene phosphoglycerate mutase 2 Neighboring gene NudC domain containing 3 Neighboring gene YKT6 v-SNARE homolog Neighboring gene glucokinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056527.1 Chromosome 6 Reference SceUnd_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium/calmodulin-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium/calmodulin-dependent protein kinase type II subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sceloporus undulatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SceUnd_v1.1

Genomic

  1. NC_056527.1 Reference SceUnd_v1.1

    Range
    128859437..129024596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042477023.1 → XP_042332957.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:623 → 750
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  2. XM_042477024.1 → XP_042332958.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X2

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:599 → 726
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  3. XM_042477025.1 → XP_042332959.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X3

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:584 → 711
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  4. XM_042477026.1 → XP_042332960.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X4

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:410 → 537
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  5. XM_042477027.1 → XP_042332961.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X5

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:395 → 522
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  6. XM_042477030.1 → XP_042332964.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X8

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:371 → 498
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  7. XM_042477029.1 → XP_042332963.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X7

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:371 → 498
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  8. XM_042477032.1 → XP_042332966.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X9

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:347 → 474
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  9. XM_042477028.1 → XP_042332962.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X6

    Conserved Domains (2) summary
    cd14086
    Location:12 → 303
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:386 → 513
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain
Nucleotide Protein
Heading Accession and Version

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