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LOC105142980 tropomyosin-2-like [ Acromyrmex echinatior (Panamanian leafcutter ant) ]

Gene ID: 105142980, updated on 2-Oct-2024

Summary

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Gene symbol
LOC105142980
Gene description
tropomyosin-2-like
Locus tag
G5I_02586
See related
EnsemblRapid:LOC105142980
Gene type
protein coding
RefSeq status
MODEL
Organism
Acromyrmex echinatior
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Acromyrmex
Orthologs
honey bee all
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Genomic context

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See LOC105142980 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Aech_3.9 (GCF_000204515.1) Unplaced Scaffold NW_011626969.1 (258575..262254)

NW_011626969.1Genomic Context describing neighboring genes Neighboring gene death-associated protein kinase 1-like Neighboring gene tropomyosin-2-like Neighboring gene Down syndrome cell adhesion molecule 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_011626969.1 Unplaced Scaffold Reference Aech_3.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tropomyosin-2-like
Names
Tropomyosin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acromyrmex echinatior Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aech_3.9

Genomic

  1. NW_011626969.1 Reference Aech_3.9

    Range
    258575..262254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011050929.1 → XP_011049231.1  tropomyosin-2-like

    See identical proteins and their annotated locations for XP_011049231.1

    UniProtKB/TrEMBL
    F4WAP8
    Related
    XP_011049231.1, XM_011050929.1
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 282
    Tropomyosin; Tropomyosin
Nucleotide Protein
Heading Accession and Version

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