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12 pages, 2284 KiB  
Article
Evaluating the Diagnostic Efficacy of Using Pooled Samples for Chronic Wasting Disease Testing and Surveillance
by Monica Hepker, Jianqiang Zhang, Vellareddy Anantharam, Anumantha G. Kanthasamy, Jue Yuan, Wenquan Zou and Rachel M. Ruden
Pathogens 2024, 13(12), 1133; https://doi.org/10.3390/pathogens13121133 (registering DOI) - 21 Dec 2024
Abstract
Disease monitoring informs the opportunities for intervention by natural resource agencies tasked with managing chronic wasting disease (CWD) in wild cervids. However, allocating funds toward testing can reduce those available for education, outreach, and disease reduction. Implementation of more efficient testing strategies can [...] Read more.
Disease monitoring informs the opportunities for intervention by natural resource agencies tasked with managing chronic wasting disease (CWD) in wild cervids. However, allocating funds toward testing can reduce those available for education, outreach, and disease reduction. Implementation of more efficient testing strategies can help meet both an expanding need by resource managers and a burgeoning demand from the hunting public in North America. Here, we evaluated the efficacy of pooled testing using the enzyme-linked immunosorbent assay (ELISA), the current screening test used by veterinary diagnostic laboratories in the United States, and real-time quaking-induced conversion (RT-QuIC), an amplification assay that is being evaluated by the U.S. Department of Agriculture but is not yet approved or commercially available. The samples used in this study consisted of medial retropharyngeal lymph nodes (RPLNs) routinely collected by the Iowa Department of Natural Resources during the 2019–2020 surveillance season. The test pools contained tissue from one positive deer diluted in tissue from an increasing number of undetected deer, with each individual contributing an equal tissue volume. ELISA remained positive with pooling thresholds of 1:1, 1:2, 1:4, and 1:9 at a standard volume of tissue homogenate, whereas RT-QuIC remained positive with pooling thresholds of 1:1, 1:2, 1:4, 1:9, 1:19, and 1:49 at a 0.02% tissue dilution. Our results suggest that pooled testing can reduce diagnostic costs multi-fold, and RT-QuIC can be a viable screening test compatible with current field collection standards. Full article
(This article belongs to the Special Issue Advances in Chronic Wasting Disease)
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Figure 1

Figure 1
<p>Results of ELISA (OD of single well, blue triangles) and RT-QuIC (mean time to threshold fluorescence of quadruplicate wells ± one standard error, red circles with bars) testing on pooling thresholds of (<b>A</b>) two deer (e.g., 1:1; <span class="html-italic">n</span> = 6), (<b>B</b>) three deer (e.g., 1:2, <span class="html-italic">n</span> = 10), (<b>C</b>) five deer (e.g., 1:4; <span class="html-italic">n</span> = 6), and (<b>D</b>) 10 deer (e.g., 1:9; <span class="html-italic">n</span> = 17). All pools across assays tested positive, except for P25, which failed to amplify within 24 h on RT-QuIC and is denoted with an asterisk (*).</p>
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<p>Results of ELISA (OD of single well, blue triangles) and RT-QuIC (mean time to threshold fluorescence of quadruplicate wells ± one standard error, red circles with bars) for eight positive deer at varied pooling thresholds indicated in parentheses next to the pool ID (<b>A</b>–<b>H</b>). Although Deer ID #16 (<b>D</b>) failed to amplify in one out of four RT-QuIC replicates at a pool size of three (*), it remained otherwise detectable up to a pool size of 10. Overall, OD values across individuals, regardless of pool size, were unpredictable from run to run. In contrast, the times to reach threshold fluorescence increased with pool size and remained fairly repeatable across pool size replicates by individual.</p>
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<p>Pool size had a significant fixed effect on assay performance, decreasing OD on ELISA (<b>A</b>) and increasing time, in hours, to reach threshold fluorescence on RT-QuIC (<b>B</b>). The solid lines reflect the fixed effect estimates for pool size from the linear mixed-effects models. Points are colored by positive deer ID and reflect outputs from single wells on ELISA (duplicate mean from pre-screening used for pool size of 1) and the means of quadruplicate wells on RT-QuIC.</p>
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<p>RT-QuIC results of using CWD Positive Deer #16 (<b>A</b>) and #17 (<b>B</b>) to spike pools of varying sizes, with samples applied to the assay at two different concentrations. The blue lines indicate sample performance when run at the standard dilution of 0.02%. The orange dotted lines indicate sample performance of the same pools run at 0.2%. Using the higher concentration appears advantageous for detection speed and overall fluorescence intensity.</p>
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<p>RT-QuIC results of serially diluting tissue from three positive deer, 1 (<b>A</b>), 2 (<b>B</b>) and 3 (<b>C</b>), at four pool sizes (A = 3 deer, B = 5 deer, C = 10 deer, D = 20 deer). ThT fluorescence intensity is presented as an average across quadruplicate wells, with samples exceeding 100,000 RFUs indicating that ≥2/4 wells amplified.</p>
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26 pages, 568 KiB  
Article
Yield Responses to Total Water Input from Irrigation and Rainfall in Six Wheat Cultivars Under Different Climatic Zones in Egypt
by Ahmed Fawzy Elkot, Yasser Shabana, Maha L. Elsayed, Samir Mahmoud Saleh, Maha A. M. Gadallah, Bruce D. L. Fitt, Benjamin Richard and Aiming Qi
Agronomy 2024, 14(12), 3057; https://doi.org/10.3390/agronomy14123057 (registering DOI) - 21 Dec 2024
Abstract
In Egypt, wheat is the most consumed cereal grain, and its availability and affordability are important for social stability. Irrigation plays a vital role in wheat cultivation, despite intense competition for water resources from the River Nile across various societal sectors. To explore [...] Read more.
In Egypt, wheat is the most consumed cereal grain, and its availability and affordability are important for social stability. Irrigation plays a vital role in wheat cultivation, despite intense competition for water resources from the River Nile across various societal sectors. To explore how grain and above-ground biomass yields respond to total seasonal water input from sowing to maturity in six bread wheat cultivars, eight field irrigation experiments were performed at four locations representative of three agro-climatic zones in two consecutive cropping seasons. A three-replicate strip-plot design was used with cultivars nested within the main plots featuring five irrigation treatments, ranging from six to two applications. Overall, irrigation treatment significantly affected nine agronomic traits. Compared with the six irrigation applications treatment (T1), the two irrigation applications treatment (T5) decreased the times to heading and maturity by 6.6 (7.3%) and 8.6 (6.3%) days, respectively. Similarly, T5 reduced the plant height by 14.9 cm (14.3%), flag leaf area by 12.0 cm2 (27.2%), number of spikes per square metre by 77.7 (20.1%), number of kernels per spike by 13.9 (25.2%) and thousand grain weight by 10.0 g (19.6%). T5 also decreased the overall mean grain yield and above-ground biomass yield by 2834.9 (32.0%) and 7910.4 (32.86%) kg/ha, respectively. The grain yield and above-ground biomass production were consistently greater for all six cultivars at Al Mataenah and Sids than at Nubaria and Ismailia in the two cropping seasons. All six cultivars showed significantly greater responses to total seasonal water input for the grain yield and above-ground biomass at Al Mataenah and Ismailia. These results emphasise the necessity for choosing regions with favourable soil and climatic conditions to grow wheat cultivars that respond better to irrigation to enhance the large-scale production of wheat in Egypt. The grain and above-ground biomass yields were mostly linearly and positively associated with the total seasonal water input for all six cultivars at all four locations. This suggests that maintaining the current irrigation schedule of six irrigations is valid and should be practised to maximise productivity, particularly in areas similar to the three representative agro-climatic zones in Egypt. Full article
(This article belongs to the Section Water Use and Irrigation)
13 pages, 3509 KiB  
Article
Extraordinary 21st Century Drought in the Po River Basin (Italy)
by Abel Andrés Ramírez Molina, Glenn Tootle, Giuseppe Formetta, Thomas Piechota and Jiaqi Gong
Hydrology 2024, 11(12), 219; https://doi.org/10.3390/hydrology11120219 (registering DOI) - 21 Dec 2024
Abstract
Recent research identified 2022 as being the year of lowest seasonal April–May–June–July (AMJJ) observed streamflow for the Po River Basin (PRB) in the past two centuries. Expanding upon this research, we applied filters (2-year to 30-year filters) to the AMJJ observed streamflow and [...] Read more.
Recent research identified 2022 as being the year of lowest seasonal April–May–June–July (AMJJ) observed streamflow for the Po River Basin (PRB) in the past two centuries. Expanding upon this research, we applied filters (2-year to 30-year filters) to the AMJJ observed streamflow and identified the late 20th and 21st century as displaying extreme drought. In this study, we introduce PALEO-RECON, an automated reconstruction tool developed to leverage tree ring-based proxies and streamline regression processes. Using PALEO-RECON, we reconstructed the AMJJ streamflow, applying traditional regression techniques and using a nested approach in which 30-, 40-, and 50-year windows within the ~200-year observed streamflow record (1807 to 2022) were evaluated to capture uncertainty. Focusing on the 21st century (2000 to 2022), while several droughts in the ~2000-year paleo record may have exceeded the 2000 to 2022 drought, the recent PRB drought ending in 2022 was the lowest 23-year period in approximately 500 years, acknowledging that uncertainty increases as we move further back in time. When examining paleo and observed AMJJ streamflow records, deficit and surplus periods were evaluated, focusing on the potential “whiplash” between drought and pluvial events. We observed an increase in the frequency of whiplash events, which may be associated with a changing climate. Full article
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Figure 1
<p>Location map showing the PRB watershed, Pontelagoscuro streamflow gauge, and self-calibrated Palmer Drought Severity Index (scPDSI) cells. The map was generated using PALEO-RECON, as described in <a href="#sec2dot2dot1-hydrology-11-00219" class="html-sec">Section 2.2.1</a>.</p>
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<p>PALEO-RECON user interface. Users can specify gauge coordinates, search radius, and observed data for paleoclimate reconstructions. The interface includes options for selecting coordinate format, setting the search radius, choosing the reconstruction window size, and enabling the auto-detection of major river basins based on geographic coordinates.</p>
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<p>Bias-corrected reconstructed AMJJ Q with a 23-year end-year filter. The gray area represents the 5th/95th percentile when combining the ten retained SLR models, while the black line represents the average of the ten models. The red line represents the 2000 to 2022 23-year flow (drought).</p>
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<p>Time series of deficit (red) and surplus (blue) in Po River flows for (<b>a</b>) volume (MCM) for all years (0–2022); (<b>b</b>) max magnitude (surplus and deficit) for each century from 0 to 2000; (<b>c</b>) max length of periods for each century from 0 to 2000, and (<b>d</b>) whiplash years for each century from 0–2000. Note that uncertainty increases in the paleo data as we move further back in time. The dashed lines represent the increasing or decreasing trend in number of whiplash years (from surplus to deficit or deficit to surplus) occurring per decade.</p>
Full article ">Figure 4 Cont.
<p>Time series of deficit (red) and surplus (blue) in Po River flows for (<b>a</b>) volume (MCM) for all years (0–2022); (<b>b</b>) max magnitude (surplus and deficit) for each century from 0 to 2000; (<b>c</b>) max length of periods for each century from 0 to 2000, and (<b>d</b>) whiplash years for each century from 0–2000. Note that uncertainty increases in the paleo data as we move further back in time. The dashed lines represent the increasing or decreasing trend in number of whiplash years (from surplus to deficit or deficit to surplus) occurring per decade.</p>
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<p>Annual standardized streamflow (1501 to 2000) with a 23-year end-year filter for the Danube River, Inn River, and PRB.</p>
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24 pages, 5319 KiB  
Article
Cyclone Classification over the South Atlantic Ocean in Centenary Reanalysis
by Eduardo Traversi de Cai Conrado, Rosmeri Porfírio da Rocha, Michelle Simões Reboita and Andressa Andrade Cardoso
Atmosphere 2024, 15(12), 1533; https://doi.org/10.3390/atmos15121533 (registering DOI) - 21 Dec 2024
Abstract
Since the beginning of the satellite era, only three tropical cyclones have been recorded over the South Atlantic Ocean. To investigate the potential occurrence of such systems since the 1900s, ERA20C, a centennial reanalysis, was utilised. This study first evaluates the performance of [...] Read more.
Since the beginning of the satellite era, only three tropical cyclones have been recorded over the South Atlantic Ocean. To investigate the potential occurrence of such systems since the 1900s, ERA20C, a centennial reanalysis, was utilised. This study first evaluates the performance of ERA20C in reproducing the climatology of all cyclone types over the southwestern South Atlantic Ocean by comparing it with a modern reanalysis (ERA5) for the period 1979–2010. Despite its simpler construction, ERA20C is able to reproduce key climatological features, such as frequency, location, seasonality, intensity, and thermal structure of cyclones similar to ERA5. Then, the Cyclone Phase Space (CPS) methodology was applied to determine the thermal structure at each time step for every cyclone between 1900 and 2010 in ERA20C. The cyclones were then categorised into different types (extratropical, subtropical, and tropical), and systems exhibiting a warm core at their initial time step were classified as tropical cyclogenesis. Between 1900 and 2010, 96 cases of tropical cyclogenesis were identified over the South Atlantic. Additionally, throughout the lifetime of all cyclones, a total of 1838 time steps exhibited a tropical structure, indicating that cyclones can acquire a warm core at different stages of their lifecycle. The coasts of southeastern and southern sectors of northeast Brazil emerged as the most favourable for cyclones with tropical structures during their lifecycle. The findings of this study highlight the occurrence of tropical cyclones in the South Atlantic prior to the satellite era, providing a foundation for future research into the physical mechanisms that enabled these events. Full article
(This article belongs to the Special Issue Cyclones: Types and Phase Transitions)
13 pages, 1871 KiB  
Article
Analysis of Long-Term Monitoring of Radon Levels in a Low-Ventilated, Semi-Underground Laboratory—Dose Estimation and Exploration of Potential Earthquake Precursors
by Ljiljana Gulan
Atmosphere 2024, 15(12), 1534; https://doi.org/10.3390/atmos15121534 (registering DOI) - 21 Dec 2024
Abstract
This study involves continuous radon monitoring during the academic year 2023/24. An Airthings Corentium Home radon detector placed in the basement laboratory of a faculty building in Kosovska Mitrovica (N 42.897°, E 20.867°) was used for continuous measurements. The average radon concentration was [...] Read more.
This study involves continuous radon monitoring during the academic year 2023/24. An Airthings Corentium Home radon detector placed in the basement laboratory of a faculty building in Kosovska Mitrovica (N 42.897°, E 20.867°) was used for continuous measurements. The average radon concentration was 303 Bq/m3, and a seasonal pattern during the measuring period was observed. For the first time, the results were grouped by week, excluding non-working days, to present a real case scenario with the aim of assessing the radon exposure of students, teachers, and employed persons. The inhalation dose from radon (1.54 mSv) was very high considering that exposure occurred in both semesters. Another aspect of continuous radon monitoring was to explore the relationship between indoor radon measurements and the occurrences of earthquakes in the Balkan region. Daily variations in radon (peaks and differences) were analyzed at the monitoring site by using both empirical laws and taking into account the earthquake data set provided by the Seismological Survey of Serbia. The analysis revealed that the events chosen to confirm a clear association between earthquake occurrence and enhanced radon activities in the air(as a precursor of seismic activities) did not meet the required criteria but most likely reflected external meteorological conditions. Full article
(This article belongs to the Special Issue Environmental Radon Measurement and Radiation Exposure Assessment)
13 pages, 3807 KiB  
Article
First Detection of West Nile Virus Lineage 2 in Culex pipiens Vectors in Croatia
by Goran Vignjević, Nataša Bušić, Nataša Turić, Zsaklin Varga, Brigitta Zana, Ágota Ábrahám, Kornélia Kurucz, Ivana Vrućina and Enrih Merdić
Pathogens 2024, 13(12), 1131; https://doi.org/10.3390/pathogens13121131 (registering DOI) - 21 Dec 2024
Abstract
The West Nile virus (WNV) has recently become more widespread, posing a threat to both human and animal health. In Western Europe, most outbreaks have been caused by WNV lineage 1, while in Eastern Europe, WNV lineage 2 has led to human and [...] Read more.
The West Nile virus (WNV) has recently become more widespread, posing a threat to both human and animal health. In Western Europe, most outbreaks have been caused by WNV lineage 1, while in Eastern Europe, WNV lineage 2 has led to human and bird mortality. The ability to appropriately manage this threat is dependent on integrated surveillance and early detection. This study aimed to quantify the prevalence of WNV infection in mosquitoes and to identify the circulating viral lineage in eastern Croatia. Mosquito traps were set up in rural and urban areas during the 2021–2023 seasons, and the collected specimens were identified morphologically. Mosquito species Culex pipiens and Aedes albopictus were tested for Flaviviruses using conventional PCR in a heminested system. The positive samples were then subjected to a specific real-time PCR designed to detect WNV. A total of 385 mosquito pools were tested, and positive pools were found in samples from Osijek-Baranja and Vukovar-Srijem, both of which contained Cx. pipiens mosquitoes. Sequencing of amplicons revealed WNV lineage 2 partial NS5 gene sequences. Phylogenetic analysis suggests the Hungarian origin of strain, which complements birds’ migratory routes. These findings indicate the first detection of WNV in mosquitoes in Croatia. This suggests that human cases in this region are likely due to infections with lineage 2 transmitted by local Culex mosquitoes. Full article
(This article belongs to the Special Issue Emerging and Neglected Pathogens in the Balkans)
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<p>Map of the studied area of three counties in eastern Croatia. Orange dots are positive sites for <span class="html-italic">Flavivirus</span>, red dots are positive sites for WNV, and blue dots are negative sites.</p>
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<p>Maximum likelihood phylogenetic tree of the Croatian WNV isolate (GenBank database Acc.No.: PQ468649) and WNV isolates from neighboring countries. The tree was constructed based on the amino acid sequences of the complete polyprotein region of the viruses. All sequences belong to the Lineage 2 genetic variant. Sequences are indicated by their GenBank accession number, strain name, and country of origin. The sequence related to this study is highlighted with a light green background. The scale bar indicates the mean number of amino acid substitutions per site. The tree was created according to the best-fit model HIBb + F + I with a bootstrap resampling method with 1000 replicates.</p>
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19 pages, 16427 KiB  
Article
Temporal and Spatial Dynamics of Summer Crop Residue Burning Practices in North China: Exploring the Influence of Climate Change and Anthropogenic Factors
by Shuai Yin, Kunpeng Yi, Xiu Zhang, Tangzhe Nie, Lingqi Meng, Zhongyi Sun, Qingnan Chu, Zhipin Ai, Xin Zhao, Lan Wu, Meng Guo and Xinlu Liu
Remote Sens. 2024, 16(24), 4763; https://doi.org/10.3390/rs16244763 (registering DOI) - 20 Dec 2024
Abstract
Better understanding the complex mechanisms underlying the variations in crop residue burning (CRB) intensity and patterns is crucial for evaluating control strategies and developing sustainable policies aimed at the efficient recycling of crop residues. However, the intricate interplay between the CRB practices, climate [...] Read more.
Better understanding the complex mechanisms underlying the variations in crop residue burning (CRB) intensity and patterns is crucial for evaluating control strategies and developing sustainable policies aimed at the efficient recycling of crop residues. However, the intricate interplay between the CRB practices, climate variability, and human activities poses a significant challenge in this endeavor. Here, we utilize the high spatiotemporal resolution of satellite observations to characterize and explore the dynamics of summer CRB in North China at multiple scales. Between 2003 and 2012, there was a significant intensification of summer CRB in North China, with the annual number of burning spots increasing by an average of 499 (95% confidence interval, 252–1426) spots/year. However, in 2013, China promulgated the stringent Air Pollution Prevention and Control Action Plan, which led to a rapid decrease in the intensity of summer CRB. Local farmers also adjusted their burning practices, shifting from concentrated and intense burning to a more dispersed and uniformly intense approach. Between 2003 and 2020, the onset of summer CRB shifted earlier in North China by 0.75 (0.5–1.1) days/year, which is attributed to the combined effects of climate change and anthropogenic controls. Specifically, the onset time is found to be significantly and negatively correlated with spring temperature anomalies and positively correlated with anomalies in the number of spring frost days. Climate change has led to a shortened crop growing season, resulting in an earlier start to summer CRB. Moreover, the enhanced anthropogenic controls on CRB expedited this process, making the trend of an earlier start time even more pronounced from 2013 to 2020. Contrary to the earlier onset of summer CRB, the termination of local wheat residue burning experienced a notable delay by 1.0 (0.8–1.4) days/year, transitioning from mid-June to early July. Full article
18 pages, 976 KiB  
Article
Forecasting Indoor Air Quality in Mexico City Using Deep Learning Architectures
by Jorge Altamirano-Astorga, J. Octavio Gutierrez-Garcia and Edgar Roman-Rangel
Atmosphere 2024, 15(12), 1529; https://doi.org/10.3390/atmos15121529 (registering DOI) - 20 Dec 2024
Abstract
Air pollution causes millions of premature deaths per year due to its strong association with several diseases and respiratory afflictions. Consequently, air quality monitoring and forecasting systems have been deployed in large urban areas. However, those systems forecast outdoor air quality while people [...] Read more.
Air pollution causes millions of premature deaths per year due to its strong association with several diseases and respiratory afflictions. Consequently, air quality monitoring and forecasting systems have been deployed in large urban areas. However, those systems forecast outdoor air quality while people living in relatively large cities spend most of their time indoors. Hence, this work proposes an indoor air quality forecasting system, which was trained with data from Mexico City, and that is supported by deep learning architectures. The novelty of our work is that we forecast an indoor air quality index, taking into account seasonal data for multiple horizons in terms of minutes; whereas related work mostly focuses on forecasting concentration levels of pollutants for a single and relatively large forecasting horizon, using data from a short period of time. To find the best forecasting model, we conducted extensive experimentation involving 133 deep learning models. The deep learning architectures explored were multilayer perceptrons, long short-term memory neural networks, 1-dimension convolutional neural networks, and hybrid architectures, from which LSTM rose as the best-performing architecture. The models were trained using (i) outdoor air pollution data, (ii) publicly available weather data, and (iii) data collected from an indoor air quality sensor that was installed in a house located in a central neighborhood of Mexico City for 17 months. Our empirical results show that deep learning models can forecast an indoor air quality index based on outdoor concentration levels of pollutants in conjunction with indoor and outdoor meteorological variables. In addition, our findings show that the proposed method performs with a mean squared error of 0.0179 and a mean absolute error of 0.1038. We also noticed that 5 months of historical data are enough for accurate training of the forecast models, and that shallow models with around 50,000 parameters have enough predicting power for this task. Full article
(This article belongs to the Section Air Quality)
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<p>Deep learning forecasting methodology.</p>
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<p>Time series for the IAQ: One and two weeks provided for showing details and more general behavior, respectively. Sampled every 15 min.</p>
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<p>Mean and standard deviation of the time series for the IAQ: Distributions per month, day of the week, and hour.</p>
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<p>Auto-correlation and partial auto-correlation plots for the first 120 lags, sampled every 15 min from the time series for the IAQ.</p>
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<p>Cross-correlation and lagged cross-correlation between the IAQ target variable and the independent variables up to 120 lags.</p>
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<p>Implemented data pipeline for preprocessing the time-series data.</p>
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<p>Architecture of the top-performing model: LSTM02.</p>
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<p>Deep learning models for indoor air quality forecasting: performance vs. size.</p>
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16 pages, 535 KiB  
Article
Coaches' Subjective Perceptions and Physical Performance: Key Factors in Youth Football Talent Identification—An Exploratory Study
by Federico Abate Daga, Ruben Allois, Massimiliano Abate Daga, Franco Veglio and Samuel Agostino
Educ. Sci. 2024, 14(12), 1400; https://doi.org/10.3390/educsci14121400 (registering DOI) - 20 Dec 2024
Abstract
Background: This study examines the subjective attributes that coaches consider most important for identifying and developing the talent of junior élite football players. It also explores whether players’ physical fitness efficiency moderates these attributes and influences playing time during the regular season. Methods: [...] Read more.
Background: This study examines the subjective attributes that coaches consider most important for identifying and developing the talent of junior élite football players. It also explores whether players’ physical fitness efficiency moderates these attributes and influences playing time during the regular season. Methods: Forty-three junior élite football players and four Italian Serie A club coaches participated in the study, contributing their unique perspectives and experiences. Players’ physical fitness was assessed using the Yo-Yo Intermittent Recovery Level 1 test, while coaches rated players’ abilities through a structured questionnaire. Results: A significant positive relationship was found between ’understanding of the game and position on the field’ and total playing time (t = 3.498, p < 0.01, β = 0.953). Physical efficiency further strengthened this relationship when players’ fitness levels were average (b = 0.624, p < 0.001) and one standard deviation above the mean (b = 0.891, p < 0.001). Conclusions: These findings highlight the importance of tactical awareness in earning playing time and suggest that physical fitness enhances the effect of cognitive abilities on performance. This study provides insights into how coaches assess talent and underscores the value of integrating physical and tactical development in youth football, providing a testament to the power of collaboration in advancing our understanding of talent identification in sports. Full article
15 pages, 6418 KiB  
Article
Phylogenetic and Pathogenic Analysis of H5N1 and H5N6 High Pathogenicity Avian Influenza Virus Isolated from Poultry Farms (Layer and Broiler Chickens) in Japan in the 2023/2024 Season
by Hayate Nishiura, Asuka Kumagai, Junki Mine, Yoshihiro Takadate, Saki Sakuma, Ryota Tsunekuni, Yuko Uchida and Kohtaro Miyazawa
Viruses 2024, 16(12), 1956; https://doi.org/10.3390/v16121956 - 20 Dec 2024
Abstract
During the 2023–2024 winter, 11 high pathogenicity avian influenza (HPAI) outbreaks caused by clade 2.3.4.4b H5N1 and H5N6 HPAI viruses were confirmed in Japanese domestic poultry among 10 prefectures (n = 10 and 1, respectively). In this study, we aimed to genetically [...] Read more.
During the 2023–2024 winter, 11 high pathogenicity avian influenza (HPAI) outbreaks caused by clade 2.3.4.4b H5N1 and H5N6 HPAI viruses were confirmed in Japanese domestic poultry among 10 prefectures (n = 10 and 1, respectively). In this study, we aimed to genetically and pathologically characterize these viruses. Phylogenetic analysis revealed that H5N1 viruses were classified into the G2d-0 genotype, whereas the H5N6 virus was a novel genotype in Japan, designated as G2c-12. The G2c-12 virus shared PB2, PB1, PA, HA, and M genes with previous G2c viruses, but had NP and NS genes originating from avian influenza viruses in wild birds abroad. The N6 NA gene was derived from an H5N6 HPAI virus that was different from the viruses responsible for the outbreaks in Japan in 2016–2017 and 2017–2018. Experimental infections in chickens infected with H5N1(G2d-0) and H5N6(G2c-12) HPAI viruses showed no significant differences in the 50% chicken lethal dose, mean death time, or virus shedding from the trachea and cloaca, or in the histopathological findings. Different genotypes of the viruses worldwide, their introduction into the country, and their stable lethality in chickens may have triggered the four consecutive seasons of HPAI outbreaks in Japan. Full article
(This article belongs to the Section Animal Viruses)
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Figure 1
<p>Geographic locations of prefectures where H5-subtype high pathogenicity avian influenza (HPAI) cases were confirmed in Japan during the winter of 2023–2024. The blue circles indicate the HPAI cases caused by H5N1 HPAI virus and the yellow circle indicates the HPAI case caused by the H5N6 HPAI virus. The order of outbreaks is indicated by the number in each circle. The purple areas represent prefectures where the H5-subtype HPAI virus has been detected in wild birds.</p>
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<p>Phylogenetic trees based on the HA gene. Maximum-likelihood tree of clade 2.3.4.4b covering the G2c and G2d subgroups. The blue asterisk indicates the cluster including H5-subtype HPAI viruses isolated during the winter of 2022–2023. Europe H5N1 viruses isolated in the same season were genetically close to HPAI viruses isolated in Japan.</p>
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<p>Detailed phylogenetic trees focusing on the HA gene. (<b>a</b>,<b>b</b>) Extended phylogenetic trees covering the H5-subtype HPAI viruses of the (<b>a</b>) G2d and (<b>b</b>) G2c subgroups. The purple-, blue-, and red-colored names refer to H5-subtype HPAI viruses isolated from poultry in Japan during the winters of 2021–2022, 2022–2023, and 2023–2024, respectively. More than 0.60 of Fast-global bootstrap values are shown.</p>
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<p>Phylogenetic trees focusing on the neuraminidase (NA) gene. (<b>a</b>) Maximum likelihood tree based on the N6 NA gene covering the H5N6 viruses causing HPAI outbreaks in Japan to date. (<b>b</b>) An extended phylogenetic tree of the N6 NA gene covering the Japanese H5N6 HPAI viruses of the G2c subgroups. The red-colored names represent H5N6 HPAI viruses isolated from poultry in Japan during the winter of 2023–2024. More than 0.60 of Fast-global bootstrap values are shown.</p>
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<p>Phylogenetic trees focusing on the nucleoprotein (NP) and nonstructural protein (NS) genes. (<b>a,b</b>) Enlarged maximum likelihood trees based on the (<b>a</b>) NP gene and (<b>b</b>) NS gene covering the H5N6 HPAI viruses isolated in Japan and Korea during the winter of 2023–2024. The red-colored names represent H5N6 HPAI viruses isolated from poultry in Japan during the winter of 2023–2024. More than 0.60 of Fast-global bootstrap values are shown.</p>
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<p>Survival rates of chickens inoculated with (<b>a</b>) Saga/23A2T, (<b>b</b>) Kagoshima/23B1T, and (<b>c</b>) Hokkaido/22B3C. Circles, squares, triangles, and rhombuses indicate the survival rates of chickens inoculated with 10<sup>6</sup>, 10<sup>5</sup>, 10<sup>4</sup>, and 10<sup>3</sup> 50% egg infectious dose (EID<sub>50</sub>) of each virus, respectively.</p>
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<p>Kinetics of virus titers in each tracheal and cloacal swab from chickens inoculated with 10<sup>6</sup> EID<sub>50</sub> of (<b>a</b>) Saga/23A2T and (<b>b</b>) Kagoshima/23B1T. Circles, squares, triangles, rhombuses, and asterisks represent the different chickens.</p>
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<p>Histological and immunohistochemical findings in chickens inoculated with 10<sup>6</sup> EID<sub>50</sub> Saga/23A2T. (<b>a</b>) Lung: respiratory lobules. The air capillaries lose their pre-existing structure and are replaced by inflammatory cells, cellular debris, and fibrin (insert). Hematoxylin and eosin (HE) stain. Bar = 100 µm. (<b>b</b>) Spleen. Necrosis of ellipsoid with fibrinous exudation. HE stain. Bar = 50 µm. (<b>c</b>) Cerebrum. Focal necrosis of neurons and glial cells with pyknosis and karyorrhexis of the nucleus and neuropil vacuolation. HE stain. Bar = 50 µm. (<b>d</b>) Pancreas. Focal necrosis of acinar cells. HE stain. Bar = 50 µm. (<b>e</b>) Lung: respiratory lobules. Strong intranuclear immunohistochemical signals were found in degenerating, sloughed cells in air capillaries (inset). Immunolabeling for influenza A virus. Bar = 100 µm. (<b>f</b>) Spleen. There is positive nuclear and cytoplasmic staining of ellipsoidal cells. Immunolabeling for influenza A virus. Bar = 50 µm. (<b>g</b>) Cerebrum. Nuclei of neurons and glial cells are positive for influenza A virus. Immunolabeling for influenza A virus. Bar = 50 µm. (<b>h</b>) Pancreas. Nuclear immunoreactivity in necrotic acinar cells. Influenza A virus.</p>
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<p>Formation of the index H5N6 G2c-12 genotype virus identified in Japan in the winter of 2023–2024. The eight bars indicate the eight segments (from top to bottom: PB2, PB1, PA, HA, NP, NA, M and NS). The colors of the individual bars of the H5N6 (genotype: G2c-12) virus indicate the closest donor virus isolate of the gene segment.</p>
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17 pages, 8746 KiB  
Article
Annual Dynamics of Concentrations and Emission Rates of Particulate Matter and Ammonia in a Large-Sized, Low-Profile, Cross-Ventilated Dairy Building
by Yongzhen Li, Xiao Yang, Yujian Lu, Chao Liang, Zhengxiang Shi and Chaoyuan Wang
Agriculture 2024, 14(12), 2338; https://doi.org/10.3390/agriculture14122338 - 20 Dec 2024
Abstract
Low-profile, cross-ventilated (LPCV) dairy barns represent a modern trend in farm buildings but are associated with notable air quality challenges. To evaluate the annual variations in the pollutants in an LPCV dairy barn, an Internet-of-Things (IoT)-based environmental monitoring system was installed to continuously [...] Read more.
Low-profile, cross-ventilated (LPCV) dairy barns represent a modern trend in farm buildings but are associated with notable air quality challenges. To evaluate the annual variations in the pollutants in an LPCV dairy barn, an Internet-of-Things (IoT)-based environmental monitoring system was installed to continuously measure the total suspended particle (TSP), particle with aerodynamic diameters of ≤2.5 μm (PM2.5), and NH3 concentrations year round at multiple points. Spatiotemporal distributions and main factors were analyzed. The results showed that the annual average concentrations of indoor TSP, PM2.5, and NH3 were 86.4, 28.5, and 875.0 μg/m3, respectively. Corresponding emission rates were 140.6, 28.5, and 3461.1 mg/(h·cow). TSP concentrations were significantly higher during winter and spring (p < 0.05) and were elevated during daily operational hours, particularly in feeding alleys and downwind areas. Emissions were significantly higher in winter and summer (p < 0.05). Indoor PM2.5 concentrations in winter exceeded China’s standards for 24.9% of the time, which were 2.2 times higher than those in other seasons (p < 0.05), peaking in the morning hours. NH3 concentrations and emissions were consistently high throughout the year, with peak levels in manure and downwind areas. The building’s structure, ventilations, and daily operations were key factors affecting air pollutant levels, which need to be considered when implementing mitigation measures. Full article
(This article belongs to the Section Farm Animal Production)
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<p>Schematic diagrams showing the surveyed dairy barn.</p>
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<p>The layout of the dairy barn and the sampling points for environmental parameters.</p>
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<p>Annual variations in daily average concentrations of TSP, PM<sub>2.5</sub> and NH<sub>3</sub> in the dairy barn.</p>
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<p>Comparison of TSP, PM<sub>2.5</sub>, and NH<sub>3</sub> concentrations among different seasons. Different letters in each subplot indicate significant differences in concentrations between seasons (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Daily variations in TSP, PM<sub>2.5</sub>, and NH<sub>3</sub> concentrations among different seasons. (<b>a-1</b>) TSP, Spring (Mar.); (<b>b-1</b>) PM<sub>2.5</sub>, Spring (Mar.); (<b>c-1</b>) NH<sub>3</sub>, Spring (Mar.). (<b>a-2</b>) TSP, Summer (Aug.); (<b>b-2</b>) PM<sub>2.5</sub>, Summer (Aug.); (<b>c-2</b>) NH<sub>3</sub>, Summer (Aug.). (<b>a-3</b>) TSP, Autumn (Oct.); (<b>b-3</b>) PM<sub>2.5</sub>, Autumn (Oct.); (<b>c-3</b>) NH<sub>3</sub>, Autumn (Oct.). (<b>a-4</b>) TSP, Winter (Jan.); (<b>b-4</b>) PM<sub>2.5</sub>, Winter (Jan.); (<b>c-4</b>) NH<sub>3</sub>, Winter (Jan.).</p>
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<p>Comparison of TSP, PM<sub>2.5</sub>, and NH<sub>3</sub> concentrations inside the dairy barn at different sampling points.</p>
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<p>Annual variations in TSP, PM<sub>2.5</sub>, and NH<sub>3</sub> emission rates in the dairy barn.</p>
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<p>Comparison of average emission rates of TSP, PM<sub>2.5</sub>, and NH<sub>3</sub> among different seasons. Different letters in each subplot indicate significant differences in emissions between seasons (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Daily variations in TSP, PM<sub>2.5</sub>, and NH<sub>3</sub> emission rates among different seasons. (<b>a-1</b>) TSP, Spring (Mar.); (<b>b-1</b>) PM<sub>2.5</sub>, Spring (Mar.); (<b>c-1</b>) NH<sub>3</sub>, Spring (Mar.). (<b>a-2</b>) TSP, Summer (Aug.); (<b>b-2</b>) PM<sub>2.5</sub>, Summer (Aug.); (<b>c-2</b>) NH<sub>3</sub>, Summer (Aug.). (<b>a-3</b>) TSP, Autumn (Oct.); (<b>b-3</b>) PM<sub>2.5</sub>, Autumn (Oct.); (<b>c-3</b>) NH<sub>3</sub>, Autumn (Oct.). (<b>a-4</b>) TSP, Winter (Jan.); (<b>b-4</b>) PM<sub>2.5</sub>, Winter (Jan.); (<b>c-4</b>) NH<sub>3</sub>, Winter (Jan.).</p>
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17 pages, 1690 KiB  
Review
Contractile and Mechanical Properties of Quadriceps Muscles Measured by the Method of Tensiomyography (TMG) in Professional Soccer Players: A Systematic Review, Meta-Analysis, and Meta-Regression
by Daniel Fernández-Baeza, Germán Díaz-Ureña and Cristina González-Millán
Bioengineering 2024, 11(12), 1295; https://doi.org/10.3390/bioengineering11121295 - 20 Dec 2024
Abstract
Tensiomyography (TMG) is a non-invasive tool used to assess contractile properties. This systematic review aimed to accomplish the following: (1) Analyze quadriceps TMG parameters in professional football players during the season and compare them with reference values. (2) Assess the differences in TMG [...] Read more.
Tensiomyography (TMG) is a non-invasive tool used to assess contractile properties. This systematic review aimed to accomplish the following: (1) Analyze quadriceps TMG parameters in professional football players during the season and compare them with reference values. (2) Assess the differences in TMG parameters between quadriceps muscles. A PRISMA-guided search in PubMed, Web of Science, and Sport Discus (up to March 2024) identified 139 studies. Twelve in-season professional soccer players (20–29 years old) and quadriceps tensiomyography parameters were included (muscle displacement, delay time, and contraction time). All the studies were assessed using the Newcastle–Ottawa scale, scoring 7/9 to 8/9, indicating good quality. The findings of this study were that of the nine parameters analyzed, three variables were found to differ significantly. The weighted mean values were as follows: rectus femoris (contraction time 30.11 ms, muscle displacement 8.88 mL, delay time, 24.68 ms), vastus medialis (contraction time 25.29 ms, muscle displacement 7.45 mL, delay time, 21.27 ms), and vastus lateralis (contraction time 23.21 ms, muscle displacement 5.31 mL, delay time, 21.89 Â ms). Furthermore, significant differences were observed in muscle displacement between the rectus femoris and vastus medialis, and between the rectus femoris and vastus lateralis. The TMG can serve as a valuable device for assessing neuromuscular function in soccer players. Full article
(This article belongs to the Special Issue Biomechanics and Motion Analysis)
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<p>PRISMA flow diagram of the included studies.</p>
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<p>Results of the meta-regression analysis investigating the moderating effect of age on the time of contraction of the vastus lateralis (<b>A</b>), rectus femoris (<b>B</b>), and vastus medialis (<b>C</b>) muscles in soccer players. Blue dots represent primary studies, solid lines denote meta-regression prediction lines, and the gray area indicates the 95% confidence intervals around the mean.</p>
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<p><b>VM forest plot.</b> Note: (<b>A</b>) Dm (muscle displacement), (<b>B</b>) Tc (contraction time), (<b>C</b>) Td (delay time) [<a href="#B26-bioengineering-11-01295" class="html-bibr">26</a>,<a href="#B32-bioengineering-11-01295" class="html-bibr">32</a>,<a href="#B33-bioengineering-11-01295" class="html-bibr">33</a>,<a href="#B34-bioengineering-11-01295" class="html-bibr">34</a>,<a href="#B35-bioengineering-11-01295" class="html-bibr">35</a>].</p>
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<p><b>RF forest plot.</b> Note: (<b>A</b>) Dm (muscle displacement), (<b>B</b>) Tc (contraction time), (<b>C</b>) Td (delay time) [<a href="#B19-bioengineering-11-01295" class="html-bibr">19</a>,<a href="#B20-bioengineering-11-01295" class="html-bibr">20</a>,<a href="#B22-bioengineering-11-01295" class="html-bibr">22</a>,<a href="#B23-bioengineering-11-01295" class="html-bibr">23</a>,<a href="#B24-bioengineering-11-01295" class="html-bibr">24</a>,<a href="#B26-bioengineering-11-01295" class="html-bibr">26</a>,<a href="#B33-bioengineering-11-01295" class="html-bibr">33</a>,<a href="#B34-bioengineering-11-01295" class="html-bibr">34</a>,<a href="#B35-bioengineering-11-01295" class="html-bibr">35</a>].</p>
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<p><b>VL forest plot.</b> Note: (<b>A</b>) Dm (muscle displacement), (<b>B</b>) Tc (contraction time), (<b>C</b>) Td (delay time) [<a href="#B26-bioengineering-11-01295" class="html-bibr">26</a>,<a href="#B32-bioengineering-11-01295" class="html-bibr">32</a>,<a href="#B33-bioengineering-11-01295" class="html-bibr">33</a>,<a href="#B34-bioengineering-11-01295" class="html-bibr">34</a>,<a href="#B35-bioengineering-11-01295" class="html-bibr">35</a>].</p>
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15 pages, 8215 KiB  
Article
Influence of Flood Events on the Ecological Characteristics of Bolboschoenus planiculmis: Implications for Restoration of Grus leucogeranus Habitats
by Long Chen, Mingye Zhang, Shouzheng Tong, Yu An, Chunzi Zhao, Yuan Xin and Jiaxin Zhang
Water 2024, 16(24), 3672; https://doi.org/10.3390/w16243672 - 20 Dec 2024
Abstract
Flood events severely damage the biodiversity and ecological functions of wetlands, posing a major threat to the health and stability of wetland ecosystems. Plants play a crucial role in maintaining the stability and balance of these ecosystems by providing food and habitat for [...] Read more.
Flood events severely damage the biodiversity and ecological functions of wetlands, posing a major threat to the health and stability of wetland ecosystems. Plants play a crucial role in maintaining the stability and balance of these ecosystems by providing food and habitat for various organisms. Although the wetland plants’ responses to flooding events have been extensively studied, the multi-level ecological characteristics (on the community, population, and individual plant level) of these plants in response to flooding have not yet been investigated. In this study, the community structure and ecological characteristics of Bolboschoenus planiculmis under different flooding conditions and plant traits were studied. The results revealed significant differences in the community composition and species diversity under various flooding conditions. Under continuous flooding, the number of species was three times greater than under seasonal flooding conditions. Flood events showed a significant impact on population density and coverage of B. planiculmis. The population density and coverage were 76.10% and 66.70% higher in seasonal flooding conditions than in continuous flooding conditions. Under seasonal flooding conditions, the allocation of total biomass and bulb biomass was greater than that observed under continuous flooding conditions. The results of the correlation analysis and redundancy analysis (RDA) indicated that the water level is a critical factor influencing the variations in the multi-level ecological features of the B. planiculmis community under different flooding conditions. This study suggests that maintaining seasonal flooding is essential for the natural restoration of B. planiculmis wetlands. These findings demonstrate that flood events significantly affect the ecological characteristics of B. planiculmis and offer valuable guidelines for the near-natural restoration of Grus leucogeranus habitats. Full article
(This article belongs to the Special Issue Wetland Conservation and Ecological Restoration)
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<p>Map of the Momoge study area: (<b>a</b>) Momoge location map, (<b>b</b>) study area, (<b>c</b>) sampling sites, and (<b>d</b>) seasonal and continuous flooding areas.</p>
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<p>Species composition and growing environment of <span class="html-italic">Bolboschoenus planiculmis</span> communities under different flooding conditions: SF—seasonal flooding conditions; CF—continuous flooding conditions.</p>
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<p><span class="html-italic">Bolboschoenus planiculmis</span> community diversity and importance value under different flooding conditions (mean ± standard error, n = 15): SF—seasonal flooding condition; CF—continuous flooding condition; (<b>a</b>) species richness; (<b>b</b>) Shannon–Wiener index; (<b>c</b>) Pielou index; (<b>d</b>) Simpson’s index; and (<b>e</b>) <span class="html-italic">Bolboschoenus planiculmis</span> importance value. Different letters represent significant differences (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Ecological characteristics of <span class="html-italic">Bolboschoenus planiculmis</span> populations under different flooding conditions (mean ± standard error, n = 15): SF—seasonal flooding condition; CF—continuous flooding condition; (<b>a</b>) population density; (<b>b</b>) population coverage; and (<b>c</b>) population height. Different letters represent significant differences (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Characteristics of <span class="html-italic">Bolboschoenus planiculmis</span> biomass under different flooding conditions (mean ± standard error, n = 15). SF—seasonal flooding condition; CF—continuous flooding condition; (<b>a</b>) aboveground biomass (AB); (<b>b</b>) root biomass (RB); (<b>c</b>) bulb biomass (BB); (<b>d</b>) proportion of total biomass represented by each component. Different letters indicate significant differences in data under varying flood conditions (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Correlation analysis of community species diversity with soil environmental indicators and community and plant ecological traits. WL—water level; EC—electrical conductivity; PD—soil particle density; BD—bulk density; SP—soil porosity; MC—moisture content; H—height; C—coverage; D—density; AB—aboveground biomass; BB—bulb biomass; RB—root biomass; TB—total biomass. * indicate significant differences at <span class="html-italic">p</span> &lt; 0.05, ** indicate significant differences at <span class="html-italic">p</span> &lt; 0.01, and *** indicate significant differences at <span class="html-italic">p</span> &lt; 0.001.</p>
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<p>Results of RDA (conditional effects analysis). Blue arrows indicate population ecological characteristics and red arrows denote soil environmental indicators. WL—water level; EC—electrical conductivity; pH—pH level; PD—soil particle density; BD—bulk density; SP—soil porosity; MC—moisture content.</p>
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14 pages, 4671 KiB  
Article
Impact of El Niño–Southern Oscillation and Mechanical Pruning Strategies on the Productivity, Alternate Bearing, and Vegetative Growth of Olive Hedgerows
by Franco E. Calvo, María A. Calahorra and Eduardo R. Trentacoste
Agriculture 2024, 14(12), 2335; https://doi.org/10.3390/agriculture14122335 - 20 Dec 2024
Abstract
Mechanical pruning in narrow olive hedgerows is essential for managing alternate bearing and facilitating mechanical harvesting by influencing the number of fruit load points. In olive cv. Arbequina hedgerows (2000 trees ha−1), two pruning times (winter and spring) and two pruning [...] Read more.
Mechanical pruning in narrow olive hedgerows is essential for managing alternate bearing and facilitating mechanical harvesting by influencing the number of fruit load points. In olive cv. Arbequina hedgerows (2000 trees ha−1), two pruning times (winter and spring) and two pruning types (unilateral and bilateral) were applied under contrasting bearing conditions (ON and OFF seasons) over four consecutive seasons in La Rioja, Argentina. A strong El Niño–Southern Oscillation (ENSO) event during the final season had a profound impact, increasing winter temperatures by 2 °C and reducing the average chill accumulation by 23%, significantly reducing productivity and exacerbating alternate bearing. The results demonstrated that pruning timing alone was ineffective in controlling alternate bearing, while bilateral pruning during ON seasons showed promise in regularizing fruit and oil yields and enhancing water use efficiency. However, the severe effects of the ENSO, which disrupted the winter dormancy break of fruiting buds, could not be mitigated by the evaluated pruning strategies. Full article
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<p>Maximum, mean, and minimum daily temperatures of the experimental site recorded from June 2020 to June 2024 for Famatina, La Rioja.</p>
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<p>Cumulative chill portions, estimated according to the dynamic model between 1 May and 1 September for 2013–2023. The smoothed mean annual accumulated chill portions from 2013 to 2023 are highlighted with a solid black line.</p>
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<p>Seasonal canopy growth in width (<b>a</b>,<b>b</b>), height (<b>c</b>,<b>d</b>), and pruning biomass (<b>e</b>,<b>f</b>) of Arbequina hedgerows was measured from 2020 to 2024 under different mechanical pruning treatments applied at various times (winter and spring) and types (unilateral in successive years, bilateral in OFF seasons, and bilateral in ON seasons). Values with the same letter are not significantly different among treatments according to LSD at <span class="html-italic">p</span> ≤ 0.05. Letters are shown only when ANOVA indicated a significant effect. ns is not significant.</p>
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<p>Seasonal branch length (<b>a</b>,<b>b</b>) and node number per branch (<b>c</b>,<b>d</b>) of Arbequina hedgerows managed with mechanical pruning applied in different times (winter and spring, panels (<b>a</b>) and (<b>c</b>)) and types (unilateral in successive years, and bilateral in OFF and ON seasons, panels (<b>b</b>) and (<b>d</b>)) from 2020 to 2024 in Famatina, Argentina. Values with the same letter are not significantly different among treatments according to LSD at <span class="html-italic">p</span> ≤ 0.05. ns is not significant.</p>
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<p>Annual increase in trunk perimeter of Arbequina hedgerows managed with mechanical pruning applied in different times (winter and spring, panel (<b>a</b>)) and types (unilateral in successive years, and bilateral in OFF and in ON seasons, panel (<b>b</b>)) from 2020 to 2024 in Famatina, Argentina. Values with the same letter are not significantly different among treatments according to LSD at <span class="html-italic">p</span> ≤ 0.05. ns is not significant.</p>
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<p>(<b>a</b>) Oil yield achieved for each pruning type during the experimental period and (<b>b</b>) oil yield reductions across two-year periods (2020–2022 and 2022–2024). Values with the same letter are not significantly different within each column or source of variation, as determined by the LSD test at <span class="html-italic">p</span> ≤ 0.05. Letters are displayed only when ANOVA indicated a significant effect.</p>
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14 pages, 2580 KiB  
Technical Note
Global Semantic Classification of Fluvial Landscapes with Attention-Based Deep Learning
by Patrice E. Carbonneau
Remote Sens. 2024, 16(24), 4747; https://doi.org/10.3390/rs16244747 - 19 Dec 2024
Abstract
Rivers occupy less than 1% of the earth’s surface and yet they perform ecosystem service functions that are crucial to civilisation. Global monitoring of this asset is within reach thanks to the development of big data portals such as Google Earth Engine (GEE) [...] Read more.
Rivers occupy less than 1% of the earth’s surface and yet they perform ecosystem service functions that are crucial to civilisation. Global monitoring of this asset is within reach thanks to the development of big data portals such as Google Earth Engine (GEE) but several challenges relating to output quality and processing efficiency remain. In this technical note, we present a new deep learning pipeline that uses attention-based deep learning to perform state-of-the-art semantic classification of fluvial landscapes with Sentinel-2 imagery accessed via GEE. We train, validate and test the network on a multi-seasonal and multi-annual dataset drawn from a study site that covers 89% of the Earth’s surface. F1-scores for independent test data not used in model training reach 92% for rivers and 96% for lakes. This is achieved without post-processing and significantly reduced computation times, thus making automated global monitoring of rivers achievable. Full article
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