[go: up one dir, main page]
More Web Proxy on the site http://driver.im/
You seem to have javascript disabled. Please note that many of the page functionalities won't work as expected without javascript enabled.
 
 
Sign in to use this feature.

Years

Between: -

Subjects

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Journals

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Article Types

Countries / Regions

remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline
remove_circle_outline

Search Results (690)

Search Parameters:
Keywords = icons

Order results
Result details
Results per page
Select all
Export citation of selected articles as:
11 pages, 2244 KiB  
Article
The Impact of Pre-Treatment with Desensitizing Agents on the Effectiveness of In-Office Bleaching: An In Vitro Study
by Md Sofiqul Islam, Vivek Padmanabhan, Maryam Fuad Abry, Khadega Mohammed Mousa Ahmed, Smriti Aryal A C, Muhammed Mustahsen Rahman and Shadi El Bahra
Materials 2024, 17(24), 6097; https://doi.org/10.3390/ma17246097 - 13 Dec 2024
Viewed by 431
Abstract
In-office teeth bleaching is an esthetic dental procedure performed to whiten teeth. A desensitizing procedure often requires prior in-office bleaching to relieve tooth hypersensitivity. The objective of this study was to evaluate the bleaching efficiency of teeth specimens pre-treated with different desensitizing agents [...] Read more.
In-office teeth bleaching is an esthetic dental procedure performed to whiten teeth. A desensitizing procedure often requires prior in-office bleaching to relieve tooth hypersensitivity. The objective of this study was to evaluate the bleaching efficiency of teeth specimens pre-treated with different desensitizing agents by analyzing the color parameters. A total of 25 bovine specimens were stained and divided into five groups (n = 5). The specimens were pre-treated with GLUMA, ICON, bonding, or fluoride varnish according to the manufacturer’s instructions. Subsequently, the samples underwent three consecutive 20 min bleaching sessions using an in-office bleaching product. Color values in the CIE L*, a*, and b* color space were initially recorded, both before any treatment and after each bleaching session. The color difference (ΔE) was then computed. The data were analyzed using SPSS 24.0 software. The color alteration after pre-treatment was analyzed using a one-way ANOVA test, and the color alteration in each bleaching session was compared using a repeated-measure ANOVA test. A one-way ANOVA analysis showed a statistically significant difference in the bleaching efficiency of teeth specimens pre-treated with different desensitizers (p < 0.001). The repeated-measure ANOVA analysis showed no statistically significant difference in additional bleaching sessions (p = 0.133). The ICON and bonding pre-treatment showed the color alteration of teeth specimens before the bleaching procedure. Although the different desensitizer pre-treatments showed significant differences in bleaching efficiency, the differences in color parameters of the teeth specimens at the end of three bleaching sessions were statistically insignificant. Desensitizer pre-treatment influenced the degree of color change during multiple bleaching sessions; however, the outcome of bleaching was not affected by desensitizer pre-treatment. Full article
(This article belongs to the Special Issue Surface Properties and Surface Characterization of Dental Materials)
Show Figures

Figure 1

Figure 1
<p>Delta E value of the specimens after different desensitizer pre-treatments. Groups labeled with the same alphabetical letter are statistically insignificant.</p>
Full article ">Figure 2
<p>Delta E value after the first bleaching session of the specimens treated with different desensitizer pre-treatments. Groups labeled with same alphabetical letter are statistically insignificant.</p>
Full article ">Figure 3
<p>Delta E value after the second bleaching session of the specimens treated with different desensitizer pre-treatments. Groups labeled with same alphabetical letter are statistically insignificant.</p>
Full article ">Figure 4
<p>Delta E value after the third bleaching session of the specimens treated with different desensitizer pre-treatments. ns: The mean differences among the groups were statistically insignificant.</p>
Full article ">Figure 5
<p>Representative image of specimens from each group at the initial pre-treatment sessions and at the end of the third bleaching session.</p>
Full article ">
26 pages, 790 KiB  
Article
Study on the Characteristics and Operational Mechanisms of Industry–University–Research Collaborative Innovation in Megaprojects: The Case from China
by Xi Zhao, Yuming Liu, Xianyi Lang, Kai Liu, Xiaoxu Yang and Lin Liu
Systems 2024, 12(12), 553; https://doi.org/10.3390/systems12120553 - 11 Dec 2024
Viewed by 513
Abstract
Megaproject construction endeavors and technological innovation activities, led by industry–university–research (IUR) collaboration, demonstrate marked disparities in value orientations, implementing entities, and constituent components. These discrepancies lead to a mismatch between innovation demands and actual activities, as well as insufficient innovation motivation among construction [...] Read more.
Megaproject construction endeavors and technological innovation activities, led by industry–university–research (IUR) collaboration, demonstrate marked disparities in value orientations, implementing entities, and constituent components. These discrepancies lead to a mismatch between innovation demands and actual activities, as well as insufficient innovation motivation among construction entities, subsequently impacting innovation effectiveness and the commercialization of outcomes and failing to adequately support engineering construction needs. In response to this predicament, the academic community widely acknowledges IUR collaborative innovation as a solution. This research integrates fundamental theoretical analysis with a multi-case study approach and systematically dissects the distinctive features at the micro, meso, and macro levels, grounded in the collaborative innovation practices of IUR in three iconic railway engineering projects in China. Subsequently, it unravels the inherent operational mechanics of the IUR collaborative innovation system within large-scale projects. Specifically, at the micro level, the profound engagement of governments and project owners fosters a solid supportive environment and collaborative platform for IUR collaboration, while past successful cooperation experiences among key innovation entities enhance their technological and knowledge interactions. At the meso level, shared industry cognitions and values, hierarchical organizational structures, flexible institutional designs, and resource allocation strategies based on balancing risks and benefits collectively constitute the supporting system for megaproject collaborative innovation. At the macro level, the tight integration of the innovation chain and industrial chain promotes the formation of an open cooperation ecosystem, ensuring the continuity and systematic nature of innovation activities and accelerating the rapid commercialization and efficient utilization of innovation outcomes. This study not only enriches the theoretical connotations of IUR collaborative innovation in the context of major engineering projects but also provides theoretical foundations for strategy formulation and management practices for major project managers, holding significant value in guiding the innovation management of future major engineering projects. Full article
(This article belongs to the Special Issue Research and Practices in Technological Innovation Management Systems)
Show Figures

Figure 1

Figure 1
<p>Conceptual framework for characteristics of IUR collaborative innovation in megaprojects.</p>
Full article ">Figure 2
<p>The framework of the operation mechanism for IUR collaborative innovation in megaprojects.</p>
Full article ">
15 pages, 1746 KiB  
Article
Dairy Cattle and the Iconic Autochthonous Cattle in Northern Portugal Are Reservoirs of Multidrug-Resistant Escherichia coli
by Sandra Quinteira, Rui Dantas, Luís Pinho, Carla Campos, Ana R. Freitas, Nuno V. Brito and Carla Miranda
Antibiotics 2024, 13(12), 1208; https://doi.org/10.3390/antibiotics13121208 - 11 Dec 2024
Viewed by 507
Abstract
Background/Objectives: Animals destined for human consumption play a key role in potentially transmitting bacteria carrying antibiotic resistance genes. However, there is limited knowledge about the carriage of antibiotic-resistant bacteria in native breeds. We aimed to characterize the phenotypic profiles and antibiotic resistance genes [...] Read more.
Background/Objectives: Animals destined for human consumption play a key role in potentially transmitting bacteria carrying antibiotic resistance genes. However, there is limited knowledge about the carriage of antibiotic-resistant bacteria in native breeds. We aimed to characterize the phenotypic profiles and antibiotic resistance genes in Escherichia coli isolated from bovines, including three native Portuguese bovine breeds. Methods: Forty-nine E. coli isolates were selected from 640 fecal samples pooled by age group (eight adult or eight calf samples) from each farm, representing both dairy cattle raised in intensive systems and meat cattle raised in extensive systems in Northern Portugal. The presumptive E. coli colonies plated onto MacConkey agar were confirmed using matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS). The antibiotic resistance profiles were screened by antimicrobial susceptibility testing (EUCAST/CLSI guidelines), and the antibiotic resistance genes by PCR. Results: Most isolates showed resistance to ampicillin (69%), tetracycline (57%), gentamicin (55%), and trimethoprim + sulfamethoxazole (53%), with no resistance to imipenem. Resistance to at least one antibiotic was found in 92% of isolates, while 59% exhibited multidrug resistance. Most calf isolates, including those from native breeds, showed a multidrug-resistant phenotype. Among the adults, this was only observed in Holstein-Friesian and Barrosã cattle. None of the Holstein-Friesian isolates were susceptible to all the tested antibiotics. ESBL-producing E. coli was identified in 39% of isolates, including those from Holstein-Friesian calves and adults, Cachena calves and Minhota adults. The sul2 gene was detected in 69% of isolates, followed by blaCTX-M (45%), aac(3′)-IV (41%), and aac(6′)-Ib-cr (31%), with a higher prevalence in adults. Conclusions: This pioneering study highlights the concerning presence of multidrug-resistant E. coli in native Portuguese cattle breeds. Full article
Show Figures

Figure 1

Figure 1
<p>Phenotypic characterization of antimicrobial resistance in <span class="html-italic">E. coli</span> from cattle breeds (n = 49): (<b>a</b>) antimicrobial susceptibility profiles; and (<b>b</b>) antimicrobial resistance of <span class="html-italic">E. coli</span> isolates. Pan-sus—pan-susceptibility; Res ≥1—resistance to ≥1 antibiotic; MDR—multidrug-resistant phenotype; ESBL—extended-spectrum β-lactamase production phenotype; AMP: ampicillin; AMC: amoxicillin + clavulanic acid; CTX: cefotaxime; ATM: aztreonam; IPM: imipenem; CIP: ciprofloxacin; CN: gentamicin; AK: amikacin; TE: tetracycline; SXT: trimethoprim + sulfamethoxazole.</p>
Full article ">Figure 2
<p>Antimicrobial susceptibility profiles of <span class="html-italic">E. coli</span> isolates from cattle breeds: (<b>a</b>) Holstein-Friesian breed (n = 29, with 16 from adults and 13 from calves); (<b>b</b>) Barrosã breed (n = 12, with 6 from adults and 6 from calves); (<b>c</b>) Cachena breed (n = 5, with 2 from adults and 3 from calves); and (<b>d</b>) Minhota breed (n = 3, with 1 from an adult and 2 from calves). Pan-sus: pan-susceptibility; Res ≥ 1: resistance to ≥1 antibiotics; MDR: multidrug-resistant phenotype; ESBL: extended-spectrum β-lactamase production phenotype.</p>
Full article ">Figure 3
<p>Antibiotic susceptibility of <span class="html-italic">E. coli</span> isolates from cattle breeds: (<b>a</b>) Holstein-Friesian breed (n = 29, with 16 from adults and 13 from calves); (<b>b</b>) Barrosã breed (n = 12, with 6 from adults and 6 from calves); (<b>c</b>) Cachena breed (n = 5, with 2 from adults and 3 from calves); and (<b>d</b>) Minhota breed (n = 3, with 1 from an adult and 2 from calves). AMP: ampicillin; AMC: amoxicillin + clavulanic acid; CTX: cefotaxime; ATM: aztreonam; IPM: imipenem; CIP: ciprofloxacin; CN: gentamicin; AK: amikacin; TE: tetracycline; SXT: trimethoprim + sulfamethoxazole.</p>
Full article ">Figure 4
<p>Genotypic characterization of the antimicrobial resistance profile of the <span class="html-italic">E. coli</span> (n = 49) isolated from all the cattle breeds: (<b>a</b>) Holstein-Friesian (n = 29, with 16 from adults and 13 from calves); (<b>b</b>) Barrosã (n = 12, with 6 from adults and 6 from calves); (<b>c</b>) Cachena (n = 5, with 2 from adults and 3 from calves); and (<b>d</b>) Minhota (n = 3, with 1 from an adult and 2 from calves).</p>
Full article ">Figure 5
<p>Spatial distribution of the bovine farms based on the four breeds included in this study. Each circle represents a sample collection region.</p>
Full article ">
18 pages, 6155 KiB  
Article
Heritage on the High Plains: Motive-Based Market Segmentation for a US National Historic Site
by Kathleen L. Andereck, Nicholas Wise, Megha Budruk and Kelly S. Bricker
Sustainability 2024, 16(24), 10854; https://doi.org/10.3390/su162410854 - 11 Dec 2024
Viewed by 331
Abstract
Over the past several years, many iconic national parks in the US have experienced large increases in visitation. At the same time, lesser-known units have had declining numbers. Both issues challenge the sustainable management of parks. The purpose of this study is to [...] Read more.
Over the past several years, many iconic national parks in the US have experienced large increases in visitation. At the same time, lesser-known units have had declining numbers. Both issues challenge the sustainable management of parks. The purpose of this study is to use motivation theory to develop and test the differences between market segments at a western US national historic site. The ultimate goal is to contribute to sustainable visitation management by increasing visitation and enhancing the visitor experience. A market segmentation analysis can identify and describe promising target markets. The data were collected using an onsite exit survey, resulting in a sample of 570 visitors over the high season. Three clusters of visitors were identified: heritage immersers, history appreciators, and casual sightseers. The groups differed significantly with respect to visitation motives, travel, and visitation patterns. Segments are described and implications offered. The study confirms differences among cultural heritage visitors, with some being promising as target markets for the historic site. The study underscores the importance of tailoring site management and marketing strategies to meet the diverse needs of visitors and supports the use of motive-based segmentation as a means of better understanding and sustainably managing visitor experiences. Full article
Show Figures

Figure 1

Figure 1
<p>Location of Otero County, Colorado, USA.</p>
Full article ">Figure 2
<p>Location of Bent’s Old Fort National Historic Site.</p>
Full article ">Figure 3
<p>Bent’s Old Fort National Historic Site. Source: US National Park Service.</p>
Full article ">Figure 4
<p>Trade room re-creation. Source: US National Park Service.</p>
Full article ">Figure 5
<p>Nature trail along the Arkansas River. Source: US National Park Service.</p>
Full article ">
10 pages, 987 KiB  
Article
Assessment of Change in Enamel Color and Surface Hardness Following the Use of ICON Resin Infiltration and Remineralizing Agent: An In Vitro Study
by Naif Almosa, Khalid Alaman, Fares Alkhudairi, Muhannad Alhaqbani, Mohammed Alshalawi and Rahaf Zawawi
Materials 2024, 17(24), 6030; https://doi.org/10.3390/ma17246030 - 10 Dec 2024
Viewed by 345
Abstract
This study aimed to evaluate the change in enamel color and surface micro-hardness following the use of resin-infiltration concept material (ICON) and casein phosphopeptide-amorphous calcium fluoride phosphate (CPP-ACFP) remineralizing agent. Fifty-four extracted human third molars were collected and randomly divided into three groups: [...] Read more.
This study aimed to evaluate the change in enamel color and surface micro-hardness following the use of resin-infiltration concept material (ICON) and casein phosphopeptide-amorphous calcium fluoride phosphate (CPP-ACFP) remineralizing agent. Fifty-four extracted human third molars were collected and randomly divided into three groups: group A: control with no surface treatment; group B: treated using ICON; and group C: treated using CPP-ACFP. The change in color and micro-hardness of the enamel surface were measured using spectrophotometer and Vickers hardness number, respectively. The measurements were taken at three timelines; baseline (BL), after demineralization (DM), and after surface treatment (TX). The three groups showed no significant differences in enamel color change after demineralization (p < 0.05). However, after surface treatment in relation to the baseline, groups B and C had a significant increase in color change compared to the control group (p < 0.05), and group B showed a statistically significant increase in enamel color changes compared to group C. Additionally, all groups exhibited a significant reduction in enamel micro-hardness after demineralization in comparison to their baseline (p < 0.05). Group C showed a significant increase in micro-hardness after surface treatment compared to groups A and B (p < 0.05), while group B showed a significant decrease in enamel micro-hardness compared to groups A and C (p < 0.05). These findings suggest that teeth treated with CPP-amorphous calcium fluoride phosphate (CPP-ACFP) show a significant improvement in enamel surface color after demineralization compared to the teeth treated with resin infiltration (ICON) and the non-treated teeth. Additionally, enamel surfaces treated with CPP-ACFP show significant enamel hardness regaining, while resin infiltration (ICON) compromises enamel surface hardness. Full article
(This article belongs to the Special Issue Orthodontic Materials: Properties and Effectiveness of Use)
Show Figures

Figure 1

Figure 1
<p>Experimental design (BL: Baseline, DM: After demineralization, and TX: After surface treatment A: Control, B: ICON, and C: CPP-ACFP).</p>
Full article ">Figure 2
<p>Bar chart showing color change (AE) means values at different times (BL: baseline, DM: after demineralization, and TX: after surface treatment. Error bars represent the ±SD. * level of significance <span class="html-italic">p</span> &lt; 0.05, ** level of significance <span class="html-italic">p</span> &lt; 0.01. (∆E1 (BL/DM) represents the color change in the specimen after demineralization in relation to their baseline, ∆E2 (DM/TX) represents the color change in the specimen after treatment in relation to after demineralization, and ∆Enet (BL/DM_DM/TX) represents the color change after treatment in relation to their bassline).</p>
Full article ">Figure 3
<p>Bar chart showing micro-hardness (VHN: Vicker’s hardness number) means values at different times (BL: baseline, DM: after demineralization, and TX: after surface treatment). Error bars represent the ±SD. * level of significance <span class="html-italic">p</span> &lt; 0.05, ** level of significance <span class="html-italic">p</span> &lt; 0.01.</p>
Full article ">
21 pages, 9197 KiB  
Article
Integrating Greenhouses into Buildings: A Renewed Paradigm for Circular Architecture and Urban Regeneration
by Michele D’Ostuni, Tong Zou, Allison Sermarini and Leonardo Zaffi
Sustainability 2024, 16(23), 10685; https://doi.org/10.3390/su162310685 - 5 Dec 2024
Viewed by 592
Abstract
In the post-COVID-19 era, there has been an increasing interest in re-evaluating citizens’ living conditions within dense and grey urban areas. The provision of green spaces has always been identified as an important aspect of alleviating contemporary everyday life stress and preventing or [...] Read more.
In the post-COVID-19 era, there has been an increasing interest in re-evaluating citizens’ living conditions within dense and grey urban areas. The provision of green spaces has always been identified as an important aspect of alleviating contemporary everyday life stress and preventing or limiting mental health-related issues. It is also an important strategy to mitigate urban heat islands and foster adaptation strategies to climate change. Among the numerous experiments of ‘green action’ available to urban planners, urban farming strategies have been widely used in Europe to provide green spaces and ecosystem services, exploring the topics related to self-production of food, biodiversity, and zero-km cultivation. Therefore, finding new spaces for agriculture in urban environments has driven scientists, researchers, and entrepreneurs to develop new soilless technologies (such as hydroponics, aquaponics, and aeroponics) to maximize yields in urban areas, creating new agricultural and architectural models such as the vertical farms (VF) and the building-integrated greenhouses (BIGH). In this regard, the objective of this paper is to recontextualize the integrated greenhouse element for high-tech food production as new iconic architectural models derived from the experience of the Victorian Winter Gardens and the first tropical greenhouses. Revisiting these perspectives, this paper offers opportunities to redefine the greenhouse as a multifunctional asset that aligns with both environmental goals and architectural standards. Full article
Show Figures

Figure 1

Figure 1
<p>Types of orangeries. Colored engraving, Wellcome Collection, London. Source: Wellcome Collection. The image shows three typologies of orangeries, namely: (1) a modern greenhouse; (2) a circular conservatory; (3) a common conservatory.</p>
Full article ">Figure 2
<p>Wardian Case by Nathaniel Bagshaw Ward. Credits: © On the Growth of Plants in Closely Glazed Cases.</p>
Full article ">Figure 3
<p>Serres d’Auteuil. Palmarium—Jardin botanique de la Ville de Paris—France. Credits: © Salix/Wikimedia Commons.</p>
Full article ">Figure 4
<p>Three-climate Greenhouse, De Hortus, Amsterdam. Credits: L. Zaffi, M. D’Ostuni.</p>
Full article ">Figure 5
<p>The “Crystal Palace” from the Great Exhibition at Sydenham. Colored process print, ca. 1861, Wellcome Collection. Source: Wellcome Collection.</p>
Full article ">Figure 6
<p>Research Greenhouse with Hydroponics Agriculture at the Department of Agricultural and Food Science. University of Bologna, Italy. Credits: L. Zaffi, M. D’Ostuni.</p>
Full article ">Figure 7
<p>Mediamatic. Greenhouses for growing vegetables and for dinner. Amsterdam. Credits: L. Zaffi, M. D’Ostuni.</p>
Full article ">Figure 8
<p>De Kas, Amsterdam. The main greenhouse and the productive area. Credits: L. Zaffi, M. D’Ostuni.</p>
Full article ">Figure 9
<p>Zoku.The addition of greenhouses on the rooftop of the anonymous modernist-style block in Amsterdam. Credits: L. Zaffi, M. D’Ostuni.</p>
Full article ">Figure 10
<p>The greenhouse. The addition of greenhouses on the rooftop of the anonymous modernist-style block in Amsterdam. Credits: L. Zaffi, M. D’Ostuni.</p>
Full article ">Figure 11
<p>De Dakkas. The restaurant and event hall greenhouse on the roof level of the parking building, Haarlem. Credits: L. Zaffi, M. D’Ostuni.</p>
Full article ">Figure 12
<p>HoogIJ Greenhouse on the rooftop at Amsterdam-Noord. Credits: L. Zaffi, M. D’Ostuni.</p>
Full article ">
20 pages, 20323 KiB  
Article
Are Cactus Spines Modified Leaves? Morphological and Anatomical Characterization of Saguaro Seedlings (Carnegiea gigantea) with Special Focus on Aerial Organ Primordia
by Cristina Betzabeth Miravel-Gabriel, Ryan Koeth, Nayelli Marsch-Martínez and Tania Hernández-Hernández
Plants 2024, 13(23), 3406; https://doi.org/10.3390/plants13233406 - 4 Dec 2024
Viewed by 571
Abstract
The reduction of leaves was a key event in the evolution of the succulent syndrome in Cactaceae, evolving from large, photosynthetic leaves in Pereskia to nearly suppressed microscopic foliar buds in succulent Cactoideae. This leaf reduction was accompanied by the development of [...] Read more.
The reduction of leaves was a key event in the evolution of the succulent syndrome in Cactaceae, evolving from large, photosynthetic leaves in Pereskia to nearly suppressed microscopic foliar buds in succulent Cactoideae. This leaf reduction was accompanied by the development of spines. Early histological studies, dating back a century, of the shoot apical meristem (SAM) in several species concluded that, in succulent cacti, axillary buds became areoles and leaves transformed into spines. However, these conclusions were based on limited observations, given the challenges of obtaining SAM samples from long-lived, often endangered species. Here, we present a complete study of early aerial organ development in seedlings of the iconic Carnegiea gigantea (saguaro), characterizing the different stages of seedling development. We focus on the SAM to track the emergence and development of primordia and aerial organs, closely following the spine development from undifferentiated structures. We demonstrate that young, few-days-old saguaro seedlings provide a valuable model for morpho-anatomical and molecular studies in Cactaceae. We also outline optimal laboratory practices for germinating saguaro seeds and conducting histological studies. Our observations confirm the absence of clear foliar structures and the presence of a distinct type of primordia, hypothesized to be foliar but lacking definitive foliar features. Based on our observations and a review of the literature, we revive the discussion on the ontogenetic origin of spines and propose saguaro seedlings as a promising model for studying the genetic identity of SAM primordia. Full article
(This article belongs to the Special Issue Anatomical, Ontogenetic, and Embryological Studies of Plants)
Show Figures

Graphical abstract

Graphical abstract
Full article ">Figure 1
<p>Reduction of leaves through the evolution of major Cactaceae lineages. Early diverging members in the Pereskioideae tribe have broad laminated photosynthetically functional leaves. Opuntioideae tribe members can have photosynthetic succulent leaves to ephemeral foliar buds only present in younger cladodes (e.g., <span class="html-italic">Opuntia</span>). In highly succulent members of the Cactoideae tribe, the leaves are reduced to microscopic ‘foliar’ buds in the SAM. Photos from left to right: <span class="html-italic">Pereskia grandifolia</span> (D. Boilley), <span class="html-italic">Quiabentia verticillata</span> (P.A. Mansfield), <span class="html-italic">Pereskiopsis</span> sp. (C.T. Johanson), <span class="html-italic">Opuntia</span> sp. (ZooFari), <span class="html-italic">Mammillaria</span> sp. (T. Hernández), and <span class="html-italic">Carnegiea gigantean</span> (Jrmichae). All pictures except <span class="html-italic">Mammillaria</span> sp. were distributed under a CC-BY 2.0 license at Wikimedia Commons.</p>
Full article ">Figure 2
<p>Adult <span class="html-italic">Carnegiea gigantea</span> (saguaro) plants and flowers. (<b>a</b>,<b>b</b>): adult plants of saguaro cactus growing in Tucson, AZ, USA; (<b>c</b>) saguaro flower in summer; (<b>d</b>) ripe saguaro fruit. Photo credits: (<b>a</b>,<b>b</b>): Miravel-Gabriel, C and Hernández-Hernández, T; (<b>c</b>) L. Hammar and (<b>d</b>) R. Cameron. (<b>c</b>,<b>d</b>) distributed under CC BY-NC-SA 2.0 and CC BY-NC-ND 2.0 licenses respectively, at flickr.com.</p>
Full article ">Figure 3
<p>Saguaro seeds germination and seedling growth. In (<b>A</b>) days post germination (DPG) over an 18-day period and (<b>B</b>) over an 18-month period: (a) seed, (b) 6 DPG, (c) 13 DPG, (d) 16 DPG, (e) 2 months, (f) 3 months, (g) 4 months, (h) 5 months, (i) 8 months, (j) 1 year, and (k) 1.5 years after germination.</p>
Full article ">Figure 4
<p>Anatomy and morphology of 1- to 5-year-old saguaro plants. (<b>a</b>–<b>j</b>) one year old saguaro, (<b>a</b>–<b>d</b>) side view, (<b>e</b>–<b>g</b>) top view, (<b>h</b>–<b>j</b>) tubercle with spines on top. In “a” note the helicoidal arrangement of the first formed tubercles, that will fuse as the young plant keeps developing, to form the longitudinal ribs that characterize a mature saguaro. (<b>k</b>,<b>l</b>) 4- and 5-year-old saguaros. Yellow arrows in (<b>c</b>) indicate cotyledons, yellow arrow in (<b>l</b>) indicate the formation of ribs from fused tubercles. Scales bars for (<b>a</b>–<b>d</b>,<b>k</b>,<b>l</b>) = 1 cm, (<b>e</b>–<b>g</b>) = 5 mm, (<b>h</b>–<b>j</b>) = 1 mm.</p>
Full article ">Figure 5
<p>(<b>a</b>–<b>h</b>) Ontogenetic characterization of saguaro seedling aerial primordia development in the first eight days after germination. Red arrows indicate the first emerged primordia. Scale shown with red bars = 1 mm. (<b>i</b>–<b>p</b>) Ontogenetic characterization of saguaro seedling aerial primordia development 9 to 17 days after germination. Notice the young tubercles surrounding the center of the SAM. They present spines on their top. As they develop, these tubercles fuse to form ribs. Scale bars = 1 mm.</p>
Full article ">Figure 5 Cont.
<p>(<b>a</b>–<b>h</b>) Ontogenetic characterization of saguaro seedling aerial primordia development in the first eight days after germination. Red arrows indicate the first emerged primordia. Scale shown with red bars = 1 mm. (<b>i</b>–<b>p</b>) Ontogenetic characterization of saguaro seedling aerial primordia development 9 to 17 days after germination. Notice the young tubercles surrounding the center of the SAM. They present spines on their top. As they develop, these tubercles fuse to form ribs. Scale bars = 1 mm.</p>
Full article ">Figure 6
<p>Hand drawings showing a schematic representation of major events during SAM development in saguaro seedlings. (<b>a</b>) 1 DPG, no visible SAM; (<b>b</b>) 2 DPG, SAM starts to grow and can be seen between the cotyledons, (<b>c</b>) 3 DPG; the first two primary primordia (P) are formed parallel to the cotyledon growth axis, (<b>d</b>) SAM enlarges, (<b>e</b>) 4 DPG, primary primordia enlarge and show abundant meristematic cells at the top, (<b>f</b>) 5 DPG; primary primordia increase in size and vascular tissue starts to form underneath them, spine primordia form and enlarge on top of them, (<b>g</b>) 7 DPG, three primordia are fully formed already, and trichomes appear at the top of the oldest, (<b>h</b>) 8 DPG, in few seedlings we could observe a non-spine, non-trichome primordia structure we refer here as leaf primordia (Lf), (<b>i</b>) 9 DPG the first spine primordia structures are seen on top of primary primordia or tubercle primordia, (<b>j</b>) 10 DPG, primordia seen from an upper view show an oval-shape, (<b>k</b>) spine primordia are clear and start differentiating, (<b>l</b>) 12 DPG, vascular tissue is visible enervating the SAM, primordia and cotyledons, (<b>m</b>) 13 DPG, clear spines start elongating, and small scales are seen along it, (<b>n</b>) 15 DPG, the second set of primary primordia grow and increase in size, (<b>o</b>) 17 DPG, the first formed spines are fully formed. P: tubercle or primary primordia; Lf: putative leaf primordia; Sp: Spine primordia.</p>
Full article ">Figure 7
<p>Histological sections showing the development of SAM structures during germination and growth of saguaro seedlings. (<b>a</b>) 1 DPG, (<b>b</b>) 2 DPG, (<b>c</b>) 3 DPG, (<b>d</b>,<b>e</b>) 4 DPG, (<b>f</b>) 5 DPG, (<b>g</b>) 6 DPG, (<b>h</b>,<b>i</b>) 6 DPG, (<b>j</b>) 7 DPG, (<b>k</b>) 8 DPG, (<b>l</b>,<b>m</b>) 10 DPG, (<b>n</b>) 12 DPG, (<b>o</b>) 14 DPG. P = indeterminate primordia, Tr = trichome primordia, Sp = spine primordia, V = vascular tissue, A = tunica, B = central mother cells, C = pith-rib meristem, D = peripheral zone. Scale bars = 0.2 mm, except in (<b>d</b>) and (<b>e</b>) = 0.1 mm.</p>
Full article ">Figure 8
<p>Histological sections showing spine development in saguaro seedlings. (<b>a</b>,<b>b</b>) 7 DPG showing an early spine primordia development, (<b>c</b>) 8 DPG, (<b>d</b>) 10 DPG showing vasculature towards the youngest primordia, (<b>e</b>) 7 DPG showing trichomes and two spine primordia, (<b>f</b>,<b>g</b>) 13 DPG, strong staining at the base of the spine suggests high meristematic activity, (<b>h</b>,<b>i</b>) 10 DPG, with spines that are well developed and start lignifying. Sp = spine primordia, Tr = trichome primordia, V = vascular tissue, a = base of spines, yellow arrowheads indicate trichome-like structures emerging from spines. Scales in red bars = 0.2 mm, except in (<b>e</b>) = 0.1 mm.</p>
Full article ">Figure 9
<p>Putative leaf primordia or “microleaf-like” structures observed in the shoot apical meristem (SAM) of saguaro seedlings. (<b>a</b>) At 7 DPG, and (<b>b</b>,<b>c</b>) at 8 DPG. The microleaf-like structures, outlined with yellow dotted lines, exhibit a distinct arrangement and morphology compared to spine primordia (Sp). Arrows indicate regions that may correspond to the abaxial boundary of these structures. While vascular tissue and stomata were not observed, further confirmation through scanning electron microscopy (SEM) is necessary to verify their identity. Scale bars = 0.1 mm.</p>
Full article ">Figure 10
<p>Putative model of the origin of tubercles, spines, and microleaf-like structures in the SAM of the saguaro.</p>
Full article ">
41 pages, 13618 KiB  
Article
Higher-Order DNA Secondary Structures and Their Transformations: The Hidden Complexities of Tetrad and Quadruplex DNA Structures, Complexes, and Modulatory Interactions Induced by Strand Invasion Events
by Jens Völker, Vera Gindikin and Kenneth J. Breslauer
Biomolecules 2024, 14(12), 1532; https://doi.org/10.3390/biom14121532 - 29 Nov 2024
Viewed by 647
Abstract
We demonstrate that a short oligonucleotide complementary to a G-quadruplex domain can invade this iconic, noncanonical DNA secondary structure in ways that profoundly influence the properties and differential occupancies of the resulting DNA polymorphic products. Our spectroscopic mapping of the conformational space of [...] Read more.
We demonstrate that a short oligonucleotide complementary to a G-quadruplex domain can invade this iconic, noncanonical DNA secondary structure in ways that profoundly influence the properties and differential occupancies of the resulting DNA polymorphic products. Our spectroscopic mapping of the conformational space of the associated reactants and products, both before and after strand invasion, yield unanticipated outcomes which reveal several overarching features. First, strand invasion induces the disruption of DNA secondary structural elements in both the invading strand (which can assume an iDNA tetrad structure) and the invaded species (a G-quadruplex). The resultant cascade of coupled alterations represents a potential pathway for the controlled unfolding of kinetically trapped DNA states, a feature that may be characteristic of biological regulatory mechanisms. Furthermore, the addition of selectively designed, exogenous invading oligonucleotides can enable the manipulation of noncanonical DNA conformations for biomedical applications. Secondly, our results highlight the importance of metastability, including the interplay between slower and faster kinetic processes in determining preferentially populated DNA states. Collectively, our data reveal the importance of sample history in defining state populations, which, in turn, determine preferred pathways for further folding steps, irrespective of the position of the thermodynamic equilibrium. Finally, our spectroscopic data reveal the impact of topological constraints on the differential stabilities of base-paired domains. We discuss how our collective observations yield insights into the coupled and uncoupled cascade of strand-invasion-induced transformations between noncanonical DNA forms, potentially as components of molecular wiring diagrams that regulate biological processes. Full article
(This article belongs to the Section Biomacromolecules: Nucleic Acids)
Show Figures

Figure 1

Figure 1
<p><a href="#biomolecules-14-01532-f001" class="html-fig">Figure 1</a> shows the CD spectra of the native (0 °C, black) and denatured state (90 °C, red) of the cMycG·22merC0 quadruplex (<b>A</b>), the duplex formed from cMycG·IS (<b>C</b>), and the IS single-strand iDNA complex (<b>E</b>). The corresponding normalized CD melting curves, recorded at the wavelength of the respective CD maximum (black curves), the absorbance melting curves at 270 nm (red curves), and the fluorescence melting curves (blue curves) measured for these 3 constructs, with each shown in (<b>B</b>,<b>D</b>,<b>F</b>). Note the unusual shape of the fluorescence melting curve in (<b>D</b>), where the melting of the G4·C4 duplex initially results in an increase in 2Ap fluorescence, followed by significant quenching at a higher temperature. The initial increase in 2Ap fluorescence is what is expected of melting of a duplex containing a stacked 2Ap·T base pair, while the rapid subsequent quenching of 2Ap fluorescence likely is due to the known rapid dark state quenching of 2Ap by neighboring guanines when both bases are freely mobile. As expected, (<b>E</b>) does not show a fluorescent melting curve, as the free IS does not contain a fluorescent 2Ap base.</p>
Full article ">Figure 2
<p>The native (0 °C) CD spectra (<b>A</b>), UV spectra (<b>C</b>), and fluorescence excitation spectra (<b>E</b>) of a freshly prepared cMycG·22merC0:IS sample (black curves), as well as after incubation at 4 °C for 2 weeks (red curve). Also shown in (<b>A</b>,<b>C</b>,<b>E</b>) are the spectra of both samples under denaturing conditions at 90 °C (dark and light blue). The corresponding CD, UV, and fluorescence melting (black and red) and reannealing (light and dark blue) curves at characteristic wavelengths are shown in (<b>B</b>,<b>D</b>,<b>F</b>), respectively.</p>
Full article ">Figure 3
<p>An expanded version of <a href="#biomolecules-14-01532-f002" class="html-fig">Figure 2</a>F. As we show below, the conformational transitions designated 1 and 2 in the temperature domain [I.] are related to one another by the time variable and are discussed together in the text. Vertical lines indicate boundaries between different temperature domains that are defined by clearly distinguishable conformational transformations and are designated by Roman numerals I through IV. Conformational transitions are indicated by Arabic numerals 1 through 4.</p>
Full article ">Figure 4
<p>The overlay of the CD melting curve at 288 nm, observed for the isolated IS (blue curve, right Y axis) over the fluorescence melting (black and red, left Y axis) and reannealing curves (cyan, left Y axis) of cMycG·22merC0 with the IS added. The black curve corresponds to the melting of the cMycG·22merC0:IS sample immediately after mixing, whereas the red curve is the melting profile obtained after 2 weeks of incubation at 4 °C. The fluorescence melting curves of cMycG·22merC0 with the IS added in <a href="#biomolecules-14-01532-f004" class="html-fig">Figure 4</a> are identical with those depicted in <a href="#biomolecules-14-01532-f003" class="html-fig">Figure 3</a>.</p>
Full article ">Figure 5
<p>(<b>A</b>) shows the differences in the CD spectrum for cMycG·22merC0:IS at 0 °C obtained immediately after mixing (red curve) and after a 2-week incubation at 4 °C (blue curve). As shown in (<b>B</b>), the CD spectrum of cMycG·22merC0:IS at 0 °C immediately after mixing (red curve) is best approximated by the sum of the spectra of isolated cMycG·22merC0 and the IS (black curve), whereas (<b>C</b>) shows that the CD spectrum of cMycG·22merC0:IS after 2 weeks of incubation at 4 °C (blue) is best approximated by the sum of the CD spectra of the cMycG·i CShort duplex plus the 22merC0·22merG0 duplex minus the 22merG0 single strand (black curve). The subtraction of the 22merG0 single strand is needed to account for the single-stranded overhanging ends in the cMycG·IS duplex.</p>
Full article ">Figure 6
<p>An overlay of appropriately scaled fluorescence melting curves for isolated cMycG·22merC0 (blue curve, right Y axis) over the fluorescence melting (black and red, left Y axis) and reannealing curves (cyan, left Y axis) of cMycG·22merC0 with the IS added. The black curve corresponds to the melting of the cMycG·22merC0:IS sample immediately after mixing, whereas the red curve is the melting curve obtained after 2 weeks of incubation at 4 °C. The fluorescence melting curves of cMycG·22merC0 with the IS, added in <a href="#biomolecules-14-01532-f006" class="html-fig">Figure 6</a>, are identical to those depicted in <a href="#biomolecules-14-01532-f003" class="html-fig">Figure 3</a>.</p>
Full article ">Figure 7
<p>Compares, in absolute fluorescence terms, the fluorescent melting curves of the cMycG·22merC0 complex, which never has been exposed to the IS (black dots), to that measured for cMycG·22merC0:IS immediately after mixing (red dots). The small difference in initial fluorescence intensity at 0 °C reflects an inner filter effect, not exceeding 6%, caused by the absorbance of the native IS. This inner filter effect is likely absent at higher temperatures when the IS is denatured, as neither the denatured IS nor cMycG·IS (or native cMycG·22merC0:IS) significantly absorb at 308 nm.</p>
Full article ">Figure 8
<p>Comparison between CD spectra for the cMycG·22merC0:IS complex at 36 °C (red: initial heating; blue: following 2 weeks of incubation) versus calculated CD spectra derived by the addition of the IS spectrum at 36 °C to native cMycG·22merC0 in K+ (black) versus the spectrum of isolated 22merC0 36 °C added to the spectrum of cMycG·IS (green). The lack of agreement in the CD spectra compared in <a href="#biomolecules-14-01532-f008" class="html-fig">Figure 8</a>, especially in terms of the iso-elliptic points between the measured CD spectra and the calculated/expected spectra for cMycG·22merC0 plus the IS and cMycG·IS plus 22merC0 is consistent with the cMycG·22merC0:IS sample at 36 °C not being reflective of a mixture of these two species.</p>
Full article ">Figure 9
<p>An overlay of the fluorescent melting curves measured for the isolated cMycG·IS complex (blue curve) and the fluorescent melting curves for the 1:1 mixture of preformed cMycG·22merC0 with the IS immediately after mixing (black curve) and after incubation for 2 weeks at 4 °C (red curve). The reannealing curve is shown in cyan. The inspection of <a href="#biomolecules-14-01532-f009" class="html-fig">Figure 9</a> reveals a close agreement between the high temperature transitions in all three melting curves. This concurrence suggests that the cMycG·IS complex also is present in the samples consisting of cMycG, 22merC0, and the IS at high temperatures, despite the evidence that the IS is expelled from the G4·C4 loop-duplex at lower temperatures (i.e., see prior discussion of reaction 2).</p>
Full article ">Figure 10
<p>The comparison of the observed CD spectrum for cMycG·22merC0:IS at 50 °C (red: initial heating; blue: 2 weeks of incubation) versus the calculated CD spectra by the addition of the 22merC0 spectrum at 50 °C to that of native cMycG·IS at 50 °C (black).</p>
Full article ">Chart 1
<p>Flowchart 1.</p>
Full article ">Chart 2
<p>Flowchart 2.</p>
Full article ">Chart 3
<p>Flowchart 3.</p>
Full article ">Chart 4
<p>Flowchart 4.</p>
Full article ">Scheme 1
<p>Illustrates the relationships between the three DNA oligonucleotides and their mono-, bi-, and/or trimolecular complexes.</p>
Full article ">Scheme 2
<p>Pictorial guide of the DNA states and their graphical representations (<b>a</b>) and domain assignments (<b>b</b>).</p>
Full article ">Scheme 3
<p>cMycG·22merC0.</p>
Full article ">Scheme 4
<p>cMycG·IS.</p>
Full article ">Scheme 5
<p>IS.</p>
Full article ">Scheme 6
<p>cMycG·22merC0 plus IS.</p>
Full article ">Scheme 7
<p>cMycG·22merC0 plus the IS. The invasion and expulsion of the IS.</p>
Full article ">Scheme 8
<p>cMycG·22merC0 plus the IS hysteresis.</p>
Full article ">Scheme 9
<p>cMycG·22merC0:IS; the coupled exchange of the IS and 22merC0 bound to cMycG.</p>
Full article ">Scheme 10
<p>cMycG·22merC0 plus IS &lt;-&gt; cMycG· IS plus 22merC0 &lt;-&gt; cMycG plus IS plus 22merC0.</p>
Full article ">
17 pages, 16160 KiB  
Article
Repainting and Authentic—Mineral Pigments in the Color Palettes Used in Three Old Romanian Royal Icons
by Zizi Balta, Daniela Cristea-Stan, Paul Mereuta, Dragos Mirea, Daniela Filimon, Alina Buterez and Ioana Stanculescu
Minerals 2024, 14(12), 1218; https://doi.org/10.3390/min14121218 - 29 Nov 2024
Viewed by 364
Abstract
The interior of Orthodox churches is entirely decorated with paintings, icons, and frescoes, to help create a special environment for the prayers and visitors. The paintings have religious, esthetic, and historical value, being created in the Byzantine tradition and following recommendations on style [...] Read more.
The interior of Orthodox churches is entirely decorated with paintings, icons, and frescoes, to help create a special environment for the prayers and visitors. The paintings have religious, esthetic, and historical value, being created in the Byzantine tradition and following recommendations on style and materials according to old church canons. Particular importance is attributed to the Iconostasis decorated with icons on several registers, as well as to polychrome wooden ornaments and imperial doors. This work presents the scientific investigation results of three royal icons, theoretically dating to the 19th century, from the Iconostasis of the Runcu church, an important 19th-century Romanian historical monument, aiming to answer questions regarding their age and constituent materials, especially what were the mineral pigments used in the color palettes for their painting and if there were any old repainting interventions, in order to assist their restoration and conservation. Methods of characterization employed were optical microscopy, SEM-EDX spectrometry, ATR/FTIR spectroscopy, and X-ray fluorescence spectrometry. Results obtained allowed us to date, attribute, and evaluate the conservation state of the Royal icons; to our knowledge, this study is among the very few research studies carried out so far on the religious heritage conservation field in Romania. Full article
(This article belongs to the Special Issue Historical Mineral Pigments, Volume II)
Show Figures

Figure 1

Figure 1
<p>Images of the three Royal icons before restoration showing the number of areas (spots) analyzed by XRF in situ (in black for (<b>a</b>,<b>b</b>), in white for (<b>c</b>)) and the areas from where samples were taken for ATR/FTIR analysis and cross-sections (cs) preparation and analysis (in yellow for (<b>a</b>,<b>c</b>) followed by the code <b>cs</b> written after the number of the spot analysis).</p>
Full article ">Figure 2
<p>Images of the three Royal icons after restoration.</p>
Full article ">Figure 3
<p>Optical microscopy (OM) images of sample N1cs—ochre golden from Saint Nicholas’ vestment, near the right shoulder (1cs in yellow—<a href="#minerals-14-01218-f001" class="html-fig">Figure 1</a>): (<b>a</b>) under polarized light (P) at 50× magnification; (<b>b</b>) sample’s N1cs cross-section OM image in polarized light (100×), and SEM images: (<b>c</b>) 200× (<b>d</b>) 500× indicating the blue rectangular areas where the EDX analysis was performed, (<b>e</b>) the correspondent OM image in polarized light (500×) with the illustration of the areas equivalent with the rectangular blue areas, (<b>f</b>) BSC image (500×). The table with the EDX elemental quantitative results (weight %) is also presented.</p>
Full article ">Figure 4
<p>OM images of sample N2cs—dark blue-greenish from the background of the painting, right, upper side, near the halo of Saint Nicholas (2cs in yellow, <a href="#minerals-14-01218-f001" class="html-fig">Figure 1</a> image (<b>c</b>): (<b>a</b>) 50×_P, the cross-section images: (<b>b</b>) 200×_P, (<b>c</b>) 200×_UVF, and SEM images: (<b>d</b>) 500×, (<b>e</b>) BSC (500×), (<b>f</b>) OM image in polarized light (200×_P) highlighting the spot areas where the EDX analysis was carried out. The table with the EDX elemental quantitative results (in weight %) is also presented.</p>
Full article ">Figure 5
<p>Microscopy images of sample N3cs—green, vestment of Saint Nicholas, right sleeve near the wrist (3cs in yellow—<a href="#minerals-14-01218-f001" class="html-fig">Figure 1</a>): (<b>a</b>) 50×_P, (<b>b</b>) 50×_UVF, and N3cs cross-section images: (<b>c</b>) 100×_P, (<b>d</b>) 200×_UVF, (<b>e</b>) 200×_P and (<b>f</b>) 100×_UVF.</p>
Full article ">Figure 6
<p>Optical images of sample MD4cs blue from the background, on the upper left side, near the corner of the icon of Mother of God: (<b>a</b>) 50×_P, (<b>b</b>) 50×_R, and the MD4cs cross-section images: (<b>c</b>) 100×_R, (<b>d</b>)100×_P, (<b>e</b>) SEM image at 200× magnification and (<b>f</b>) 100×_UVF.</p>
Full article ">Figure 7
<p>SEM images of sample MD4cs blue background: (<b>a</b>) at magnification 500×, (<b>c</b>) the BSC image (500×), and (<b>b</b>) the OM image in polarized light 100×_P highlighting the analyzed areas where the EDX analysis was carried out. The table with the EDX elemental quantitative results (weight %) in the analyzed blue rectangular and orange areas is also presented.</p>
Full article ">Figure 8
<p>OM image of sample MD5cs golden background of Mother of God’s icon, upper left side of the painting, near the corner: (<b>a</b>) 50×_P, and the cross-section OM and SEM images: (<b>b</b>) 100×_R (OM), (<b>c</b>) 200× (SEM), (<b>d</b>) 500× (SEM), (<b>e</b>) 200×_P (OM) and (<b>f</b>) BSC image (500×) illustrating the spot areas where the EDX analysis were performed. A table with the EDX elemental quantitative results (in weight %) is also presented.</p>
Full article ">Figure 9
<p>OM and SEM microscopy images of sample MD5cs bis and cross-sections: (<b>a</b>) OM in polarized light (50×_P), (<b>b</b>) OM cross-section in reflected light at 100×_R, (<b>c</b>) OM cross-section in fluorescent light with UV filter at 100×_UVF, (<b>d</b>) SEM BSC image (200×), (<b>e</b>) SEM (500×) illustrating the analyzed areas where the EDX analysis was performed, and (<b>f</b>) SEM BSC image (500×) and the table with the EDX elemental quantitative results (weight %).</p>
Full article ">Figure 10
<p>ATR-FTIR spectra of sample N2cs (St. Nicholas icon) compared to the spectra of identified materials from the Infrared and Raman Users Group (IRUG) database [<a href="#B17-minerals-14-01218" class="html-bibr">17</a>].</p>
Full article ">Figure 11
<p>ATR-FTIR spectra of sample MD4cs blue (Mother of God with Jesus Child icon).</p>
Full article ">Figure 12
<p>ATR-FTIR spectra of sample MD5cs golden (Jesus Christ icon).</p>
Full article ">
23 pages, 3332 KiB  
Article
Projected and Perceived Destination Images of the Tsunami Memorial Parks After the Great East Japan Earthquake: A Text Mining Analysis
by Sihan Zhang, Qian Wang, Prudens Naura Afzelia, Yan Tang, Yilan Xie, Jing Zhang, Yusuke Matsuyama and Katsunori Furuya
Land 2024, 13(12), 2034; https://doi.org/10.3390/land13122034 - 28 Nov 2024
Viewed by 565
Abstract
Following the Great East Japan Earthquake, dark tourism was developed in the Tohoku Region of Japan. Notably, two government-built tsunami memorial parks in Ishinomaki and Rikuzentakata have obtained attention for their profound disaster narratives, iconic disaster sites, and expansive layouts. This study is [...] Read more.
Following the Great East Japan Earthquake, dark tourism was developed in the Tohoku Region of Japan. Notably, two government-built tsunami memorial parks in Ishinomaki and Rikuzentakata have obtained attention for their profound disaster narratives, iconic disaster sites, and expansive layouts. This study is the first to compare the projected destination image presented by destination management organizations with the perceived destination image held by visitors in these parks, and in dark tourism. Using online text data from both supply and demand sides of dark tourism and text mining analyses such as word frequency analysis, co-occurrence network analysis, and affection tendency examination, we revealed similarities and disparities between these two perspectives. Furthermore, this study concluded dimensions specific to dark tourism sites within the cognitive and affective destination image. Based on the findings, the study provides advice for destination managers to improve these sites, including developing non-dark tourism products and improving infrastructures. Additionally, it proposes placing greater emphasis on themes of revitalization and future development, while fostering visitor engagement in local non-profit and citizen activities to strengthen connections with residents. The findings demonstrate the effectiveness of text mining in comparing projected and perceived destination images in the context of dark tourism sites. Full article
(This article belongs to the Special Issue Feature Papers for Land Planning and Landscape Architecture Section)
Show Figures

Figure 1

Figure 1
<p>Research gaps and objectives of the current study. A–C: Description on the research gaps; (i) and (ii): Description on the research objectives.</p>
Full article ">Figure 2
<p>Location of the study sites [<a href="#B95-land-13-02034" class="html-bibr">95</a>,<a href="#B96-land-13-02034" class="html-bibr">96</a>].</p>
Full article ">Figure 3
<p>The flow of data analysis methods.</p>
Full article ">Figure 4
<p>The co-occurrence network of the projected destination image.</p>
Full article ">Figure 5
<p>The co-occurrence network of the perceived destination image.</p>
Full article ">Figure 6
<p>Adjective frequency examination based on the circumplex model of affect.</p>
Full article ">
13 pages, 3852 KiB  
Article
Multi-Approach Unveils Potential Gene Introgression of Oil Camellias
by Menglong Fan, Zhixin Song, Ying Zhang, Xinlei Li and Zhenyuan Sun
Horticulturae 2024, 10(12), 1252; https://doi.org/10.3390/horticulturae10121252 - 26 Nov 2024
Viewed by 359
Abstract
The complex phylogenetic relationship of polyploid species provides an opportunity for a comprehensive study of gene introgression. Oil camellias refer to a class of important woody oil plant in the camellia genus, including octoploid, hexaploid, tetraploid, and diploid plants, but the phylogeny relationship [...] Read more.
The complex phylogenetic relationship of polyploid species provides an opportunity for a comprehensive study of gene introgression. Oil camellias refer to a class of important woody oil plant in the camellia genus, including octoploid, hexaploid, tetraploid, and diploid plants, but the phylogeny relationship of these species remains poorly investigated. Here, based on multiple types of evidence, including phylogenetic conflict, gene flow analysis, and representative metabolite, we reconstructed the phylogenetic relationship of oil camellias. Camellia shensiensis and C. grijsii formed a distinct branch. Phylogenetic conflict suggested that hexaploid C. oleifera probably originated from hybridization and clustered with diploid C. kissi and tetraploid C. meiocarpa. Tetraploid C. confusa probably originated from crossing the ancestor of C. kissi and C. brevistyla, and C. brevistyla probably was the maternal progenitor of hexaploid C. sasanqua. Furthermore, the composition of anthocyanin in tender leaves showed a strong correlation with phylogenetic distinctions. This study proves the feasibility of using iconic metabolic components to solve phylogenetic relationships and lays a foundation for analyzing genetic breeding and utilizing oil camellia resources. Full article
(This article belongs to the Special Issue Germplasm, Genetics and Breeding of Ornamental Plants)
Show Figures

Figure 1

Figure 1
<p>Topological discordance between the phylogenetic relationships of Sect. Oleifera based on the chloroplast genome dataset (<b>a</b>) and transcriptome orthologs (<b>b</b>) with bipartition information restored from the gene trees shown above the branches. The multispecific coalescent species tree is presented to show the branch lengths. The pie charts at each node represent the estimated proportions of gene trees with different topologies based on the nucleotide alignment; q1, q2, and q3 refer to the quartet support for the main topology (green), the first alternative (purple), and the second alternative (blue), respectively. (<b>c</b>) PCA analysis of the morphological data (leaf, flower, and fruit). (<b>d</b>) The pattern and content of anthocyanin in these plants (µg/100 mg), where the liquid-phase diagram represents four peak patterns.</p>
Full article ">Figure 2
<p>The origin of oil camellias. (<b>a</b>) Maximum-likelihood phylogenetic tree of oil camellias using whole-genome resequencing data. Numbers above the branches indicate the bootstrap values. (<b>b</b>) Gene flow events in oil camellias estimated with SNaQ and the different datasets, using <span class="html-italic">C. sinensis</span> as the outgroup, and the length of each terminal branch set to 1. (<b>c</b>–<b>e</b>) Different subsets with different outgroups.</p>
Full article ">Figure 3
<p>Identification of gene flow events between species with different ploidies. (<b>a</b>) Combinations of ABBA-BABA statistics and the corresponding values. Z-scores &gt; 3 indicate statistically significant results. (<b>b</b>) Ploidy of these oil camellias. * indicates that the ploidy has been verified with cytological data according to Ming (2000).</p>
Full article ">Figure 4
<p>Ancestral area reconstruction for oil camellias based on transcriptome orthologs. (<b>a</b>) Biogeography of Oil camellia. (<b>b</b>) Divergence time of Oli camellia. The pie charts indicate the relative estimates of possible ancestral areas. A, Central China; B, Paleotropic region; C, Eastern China; D, Southwestern China; E, Northwest China; and F, Japan. Ma, million years ago.</p>
Full article ">Figure 5
<p>Predicted parental origin model for polyploid camellias. ♀ Maternal and ♂ paternal. Probable subgenomic composition and origins are inferred from the data presented herein.</p>
Full article ">
21 pages, 4818 KiB  
Article
Characterization and Safety Evaluation of Autoclaved Gut Commensal Parabacteroides goldsteinii RV-01
by Tzu-Lung Lin, Wan-Jiun Chen, Chien-Min Hung, Yea-Lin Wong, Chia-Chen Lu and Hsin-Chih Lai
Int. J. Mol. Sci. 2024, 25(23), 12660; https://doi.org/10.3390/ijms252312660 - 25 Nov 2024
Viewed by 526
Abstract
Gut commensals play important roles in maintaining the homeostasis of human health. Previous studies indicated that the abundance of P. goldsteinii in animal hosts was increased by the administration of prebiotics such as polysaccharides purified from iconic oriental medicinal fungi. Subsequently, P. goldsteinii [...] Read more.
Gut commensals play important roles in maintaining the homeostasis of human health. Previous studies indicated that the abundance of P. goldsteinii in animal hosts was increased by the administration of prebiotics such as polysaccharides purified from iconic oriental medicinal fungi. Subsequently, P. goldsteinii was found to exert beneficial effects on the amelioration of multiple chronic inflammation-associated diseases. Even so, during the process of the development of P. goldsteinii as a next-generation probiotic (NGP), care has to be taken when it is used as a functional food ingredient. In this study, we isolated a novel P. goldsteinii strain, RV-01, from the feces of a healthy adult and carried out comprehensive analyses of its genomic and phenotypic characteristics. Bioinformatic analysis of P. goldsteinii RV-01 revealed the absence of potential virulence genes, as well as the presence of genes and traits potentially beneficial to human health, such as the production of short-chain fatty acids, anti-inflammatory lipopolysaccharides, and zwitterionic capsular polysaccharides, as well as immune regulatory proteins. To circumvent any potential side effects, the P. goldsteinii RV-01 was autoclaved before proceeding to the nonclinical safety assessment. The autoclaved P. goldsteinii RV-01 retained its anti-inflammatory effect in human colon epithelial cells. In addition to the three genotoxicity assays, 28-day subacute and 90-day subchronic animal toxicity studies (the highest dose tested was equivalent to 8.109 × 1010P. goldsteinii RV-01 cells/kg body weight/day) were also implemented. The results of all studies were negative for toxicity. These results support the conclusion that autoclaved P. goldsteinii RV-01 is safe for use as a food ingredient. Full article
(This article belongs to the Section Molecular Microbiology)
Show Figures

Figure 1

Figure 1
<p>Characteristics of <span class="html-italic">P. goldsteinii</span> RV-01 strain. (<b>A</b>) The neighbor-joining phylogenetic tree between <span class="html-italic">P. goldsteinii</span> RV-01 and similar species and strains. (<b>B</b>) The colony morphology of <span class="html-italic">P. goldsteinii</span> RV-01 on an anaerobic blood agar plate. (<b>C</b>) The rod-shaped morphology of <span class="html-italic">P. goldsteinii</span> RV-01 under a transmission electron microscope. (<b>D</b>) The circular genome map of the <span class="html-italic">P. goldsteinii</span> RV-01 strain. The first (outermost) circle represents the locations of the chromosome. The second circle represents the read coverage. The third circle represents the predicted genes on the direct strand, and the fourth circle represents the predicted genes on the complementary strand. The fifth and sixth circles represent the labels and locations of 5S, 16S, 23S rRNA, and DnaA. The two innermost circles indicate the GC skew and GC content, respectively. (<b>E</b>) The functional annotation of the <span class="html-italic">P. goldsteinii</span> RV-01 genes analyzed against the COG database.</p>
Full article ">Figure 2
<p>Production of SCFAs and bioinformatic analysis of CAZy in <span class="html-italic">P. goldsteinii</span> RV-01. (<b>A</b>) The levels of SCFAs in <span class="html-italic">P. goldsteinii</span> RV-01 culture supernatant analyzed by using MS spectrometry. (<b>B</b>) The carbohydrate utilization enzymes of <span class="html-italic">P. goldsteinii</span> RV-01 analyzed against Carbohydrate-Active Enzyme (CAZy) database.</p>
Full article ">Figure 3
<p>The predicted structure and NF-κB activation of <span class="html-italic">P. goldsteinii</span> RV-01 LPS. (<b>A</b>) The biosynthesis pathway of kdo2-lipidA in <span class="html-italic">E. coli</span>, indicating LpxL and LpxM are responsible for adding the fifth and sixth acyl chains to <span class="html-italic">E. coli</span> lipid A. (<b>B</b>) The putative genes for kdo2-lipid A synthesis of <span class="html-italic">P. goldsteinii</span> RV-01 were identified by BLAST searches using the <span class="html-italic">E. coli</span> MG1655 lipid A biosynthesis genes as queries. The gene ID and locations, as well as identities, in comparison with those in <span class="html-italic">E. coli</span> MG1655 are indicated. (<b>C</b>) The NF-κB activation of HCT116-Dual cells treated with <span class="html-italic">E. coli</span> or <span class="html-italic">P. goldsteinii</span> RV-01 alone, and treated with <span class="html-italic">E. coli</span> after pretreatment with <span class="html-italic">P. goldsteinii</span> RV-01. MOI, multiplicity of infection. ***, <span class="html-italic">p</span> &lt; 0.001.</p>
Full article ">Figure 4
<p>Genetic structure of a putative zwitterionic polysaccharide (ZPS) biosynthesis cluster in <span class="html-italic">P. goldsteinii</span> RV-01. A putative ZPS biosynthesis cluster in <span class="html-italic">P. goldsteinii</span> RV-01 was identified via searching the homologs of <span class="html-italic">wcfR</span> (indicated by a blue arrow) and <span class="html-italic">wcfS</span> (indicated by a red arrow), and the genetic structure was compared with those of <span class="html-italic">B. fragilis</span> NCTC9343. Genes important for the biosynthesis of capsular polysaccharides, such as glycosyltransferase (indicated by a yellow arrow), polymerase or ligase (indicated by a purple arrow), and flippase (indicated by a green arrow), are also shown.</p>
Full article ">Figure 5
<p>Bioinformatic analyses for functional proteins in <span class="html-italic">P. goldsteinii</span> RV-01. (<b>A</b>) Searching the whole genome of <span class="html-italic">P. goldsteinii</span> RV-01 revealed that a protein (gene 1081) was 97.3% identical with the hexosaminidase (WP_009860534.1) and harbored the hexosaminidase immunostimulatory YKGSRVWLN epitope (labeled by yellow color) [<a href="#B21-ijms-25-12660" class="html-bibr">21</a>]. (<b>B</b>) A match with the OmpA1 (gene 4451) was also found in the genome of <span class="html-italic">P. goldsteinii</span> RV-01 (99.6% protein identity with those of <span class="html-italic">P. goldsteinii</span> ASF519) [<a href="#B19-ijms-25-12660" class="html-bibr">19</a>].</p>
Full article ">Figure 6
<p>The effect of oral administration of <span class="html-italic">P. goldsteinii</span> RV-01 on GF mice. GF mice (n = 3 in GF group; n = 4 in GF + RV-01 group) were orally administered <span class="html-italic">P. goldsteinii</span> RV-01; then, the sera and colon tissues were collected after 2 weeks. (<b>A</b>–<b>C</b>) Serum levels of alanine aminotransferase (ALT), blood urea nitrogen (BUN), and creatinine (CREA). (<b>D</b>) The influence of <span class="html-italic">P. goldsteinii</span> RV-01 on gene expression in the colon of germ-free mice is indicated by volcano plot. (<b>E</b>) The pathways influenced by <span class="html-italic">P. goldsteinii</span> RV-01 determined using gene set enrichment analysis (GSEA) are shown in a dot plot. ns, not significant.</p>
Full article ">
20 pages, 1943 KiB  
Article
Designing Front-of-Package Labels to Inform Consumers and Encourage Healthier Food Choices in Bangladesh: A Qualitative Study
by Lindsey Smith Taillie, Ahmad Khairul Abrar, Ummay Afroza, Jubaida Akhtar, Violet Noe, Nicole Ide, Nora Abdel-Gawad and Sohel Reza Choudhury
Nutrients 2024, 16(23), 3989; https://doi.org/10.3390/nu16233989 - 21 Nov 2024
Viewed by 794
Abstract
Background/Objectives: Front-of-package labeling (FOPL) policies are a useful strategy to inform consumers about foods high in nutrients of concern, but little is known about what type of label works best in Bangladesh, a country with increasing levels of unhealthy food intake and diet-related [...] Read more.
Background/Objectives: Front-of-package labeling (FOPL) policies are a useful strategy to inform consumers about foods high in nutrients of concern, but little is known about what type of label works best in Bangladesh, a country with increasing levels of unhealthy food intake and diet-related diseases. Methods: We conducted 10 focus groups with men and women in rural and urban Bangladesh (n = 76). Using a semi-structured discussion guide, we asked consumers for their perceptions of the healthfulness of nutrients and foods, two common FOPLs (a color-coded guideline daily allowance [GDA] label and a warning label), and different visual elements of the warning label (e.g., shape, icon, text). Results: Participants understood the health harms of sugar and salt consumption but were less clear on saturated fat. Both FOPLs were perceived as helpful for identifying unhealthy foods, but the warning labels were perceived as easier to understand and more likely to influence behaviors than the GDA. Regarding the design of warning labels, participants perceived warning devices, holding straps, and octagonal shapes as effective but had mixed reactions to which icons or textual statements were most effective. Conclusions: FOPLs are likely to facilitate Bangladeshi consumers’ ability to identify unhealthy products. Further research is needed to understand the impact on food choices as well as the most effective design in this population. Full article
(This article belongs to the Section Nutritional Policies and Education for Health Promotion)
Show Figures

Figure 1

Figure 1
<p>Example front-of-package labels. (<b>a</b>) Example GDA label. (<b>b</b>) Example warning label for sugar. (<b>c</b>) Example GDA label in English. (<b>d</b>) Example warning label in English.</p>
Full article ">Figure 2
<p>Examples of product mockups with labels. (<b>a</b>) Fruit drink with warning label. (<b>b</b>) Biscuits with color-coded GDA label.</p>
Full article ">Figure A1
<p>Warning label design elements. (<b>a</b>) Shape differences. (<b>b</b>) Different icons for sugar. (<b>c</b>) Different icons for salt. (<b>d</b>) Different icons for fat. (<b>e</b>) Holding strap vs. no holding strap.</p>
Full article ">
14 pages, 278 KiB  
Article
Revisiting Charles Perrault’s Iconic “Bluebeard” Serial Killer in Modern French Variants
by Christa Catherine Jones
Humanities 2024, 13(6), 160; https://doi.org/10.3390/h13060160 - 19 Nov 2024
Viewed by 508
Abstract
“Bluebeard” (ATU 321: Maiden-Killer), a fairy tale about a wealthy noble man and serial killer, is the most gruesome of Charles Perrault’s fairy tales. Bluebeard epitomizes evil and horror. In Perrault’s tale, Bluebeard’s evilness is linked to patriarchy and power, as symbolized [...] Read more.
“Bluebeard” (ATU 321: Maiden-Killer), a fairy tale about a wealthy noble man and serial killer, is the most gruesome of Charles Perrault’s fairy tales. Bluebeard epitomizes evil and horror. In Perrault’s tale, Bluebeard’s evilness is linked to patriarchy and power, as symbolized by the villain’s iconic blue beard. Historically linked to Henry VIII (1491–1547), King of England, Bluebeard has also been associated with Breton commander Gilles de Rais who was hanged for sorcery and satanic abuse. This article examines how contemporary francophone “Bluebeard” variants refashion and redefine evil and whether they contain any new morals linked to evilness. Do they depict Bluebeard as a satanic, intrinsic force of evil or do they portray him in a less Manichean manner, as contemporary tales tend to do with monsters? Starting with Perrault’s famous tale, this article reveals how Bluebeard, the evil mass murderer figure and polygamist, is recast in a variety of contemporary francophone texts from Morocco, Belgium and France, with retellings by Michel Tournier (1981), Marie Darrieussecq (2002), La Barbe Bleue (Bluebeard) (2009), Amélie Nothomb (2012), Tahar Ben Jelloun (2014), Jacqueline Kelen (2014), and Cécile Coulon (2015). These modern variants illustrate Elliott Oring’s ideas about comparison and cultural context (see Oring 1986). A discussion of various French contemporary versions with a special emphasis of Ben Jelloun’s Moroccan retelling of “Bluebeard” open avenues for cross-cultural dialogue, highlighting how this tale evolves to fit different cultural contexts and continues to resonate today. Full article
(This article belongs to the Special Issue Depiction of Good and Evil in Fairytales)
22 pages, 2446 KiB  
Review
A Comprehensive Review of Autonomous Driving Algorithms: Tackling Adverse Weather Conditions, Unpredictable Traffic Violations, Blind Spot Monitoring, and Emergency Maneuvers
by Cong Xu and Ravi Sankar
Algorithms 2024, 17(11), 526; https://doi.org/10.3390/a17110526 - 15 Nov 2024
Viewed by 903
Abstract
With the rapid development of autonomous driving technology, ensuring the safety and reliability of vehicles under various complex and adverse conditions has become increasingly important. Although autonomous driving algorithms perform well in regular driving scenarios, they still face significant challenges when dealing with [...] Read more.
With the rapid development of autonomous driving technology, ensuring the safety and reliability of vehicles under various complex and adverse conditions has become increasingly important. Although autonomous driving algorithms perform well in regular driving scenarios, they still face significant challenges when dealing with adverse weather conditions, unpredictable traffic rule violations (such as jaywalking and aggressive lane changes), inadequate blind spot monitoring, and emergency handling. This review aims to comprehensively analyze these critical issues, systematically review current research progress and solutions, and propose further optimization suggestions. By deeply analyzing the logic of autonomous driving algorithms in these complex situations, we hope to provide strong support for enhancing the safety and reliability of autonomous driving technology. Additionally, we will comprehensively analyze the limitations of existing driving technologies and compare Advanced Driver Assistance Systems (ADASs) with Full Self-Driving (FSD) to gain a thorough understanding of the current state and future development directions of autonomous driving technology. Full article
(This article belongs to the Special Issue Algorithms for Smart Cities (2nd Edition))
Show Figures

Figure 1

Figure 1
<p>Perception capabilities of autonomous driving systems in adverse weather conditions [<a href="#B36-algorithms-17-00526" class="html-bibr">36</a>].</p>
Full article ">Figure 2
<p>Integrated sensor systems in advanced driver assistance technologies [<a href="#B36-algorithms-17-00526" class="html-bibr">36</a>].</p>
Full article ">Figure 3
<p>Performance comparison of AI models on object detection.</p>
Full article ">Figure 4
<p>Algorithms for managing complex traffic scenarios and violations.</p>
Full article ">
Back to TopTop