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11 pages, 223 KiB  
Article
Religious Symbolism and Political Resistance: Navalny’s Martyr Narrative in the Russian Opposition
by Nadezhda Beliakova and Zhanna Timofeeva
Religions 2025, 16(1), 40; https://doi.org/10.3390/rel16010040 (registering DOI) - 4 Jan 2025
Abstract
The death of Russian dissident Alexey Navalny in a far-northern colony after three years of imprisonment was declared a martyrdom by the Russian opposition, reflecting the sentiments of a part of Russian society. This unexpected reference to martyr narrative by a largely secular [...] Read more.
The death of Russian dissident Alexey Navalny in a far-northern colony after three years of imprisonment was declared a martyrdom by the Russian opposition, reflecting the sentiments of a part of Russian society. This unexpected reference to martyr narrative by a largely secular and anti-clerical opposition has set a significant precedent when religious discourse is instrumentalized not only by official propaganda but also by its critics. The authors posit that the construction of a martyr narrative is deeply political, being a part of contemporary ideological war. This article argues that Alexey Navalny’s death and its subsequent sacralization by opposition figures represent a significant moment in contemporary Russian politics. By adopting religious narratives and symbols, the opposition not only mobilizes support but also challenges the regime’s monopoly on ideological and religious discourse. However, this strategic use of martyrdom carries inherent contradictions, reflecting the opposition’s ambivalent relationship with religion and the Russian Orthodox Church. Full article
(This article belongs to the Section Religions and Humanities/Philosophies)
9 pages, 419 KiB  
Article
Thiamine Deficiency Is Common and Underrecognized in Emergency Department Oncology Patients
by Deepika Boopathy, Daniel Grahf, Jacob Ross, Kegham Hawatian, Jo-Ann Rammal, Katherine Alaimo and Joseph B. Miller
J. Clin. Med. 2025, 14(1), 257; https://doi.org/10.3390/jcm14010257 (registering DOI) - 4 Jan 2025
Abstract
Background: Wernicke’s encephalopathy can occur in oncology patients independent of alcohol use, likely resulting from poor dietary thiamine intake. High metabolic demands, such as those in acute illnesses seen in the emergency department (ED), can exacerbate thiamine deficiency. In this study, our [...] Read more.
Background: Wernicke’s encephalopathy can occur in oncology patients independent of alcohol use, likely resulting from poor dietary thiamine intake. High metabolic demands, such as those in acute illnesses seen in the emergency department (ED), can exacerbate thiamine deficiency. In this study, our objective was to assess the incidence of thiamine deficiency in ED oncology patients, which could lead to Wernicke’s encephalopathy or other thiamine deficiency disorders if left untreated. Methods: This was a single-center prospective cohort study. We included patients with acute illness and a history of active cancer management in the ED of a large, urban hospital. We also included age and sex-matched control patients with no history of cancer who sought ED care. We excluded patients with a history of alcohol use or parenteral thiamine administration before enrollment. We recorded whole blood thiamine levels to measure total body thiamine stores and collected data on clinical variables, thiamine treatment, and adverse events. Results: In total, 87 oncology and 71 control patients were included in the study. The mean age was 62.1 ± 13.7 and 58.9 ± 12.6 years, respectively, and 48% of oncology vs. 55% of control participants were female. The most common cancers represented were colon (23%), lung (25%), prostate (10%), and breast (9%). Thiamine deficiency was significantly higher in ED oncology patients (25, 28.7%) compared to controls (6, 8.5%), odds ratio 4.4 (95% CI 1.7–11.4). None of the oncology patients with deficiency received thiamine treatment in the ED. Conclusions: Our findings suggest that thiamine deficiency is prevalent in acutely ill oncology patients, yet rarely treated in the ED. Full article
(This article belongs to the Special Issue Clinical Guidelines in Critical Care Medicine)
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Graphical abstract

Graphical abstract
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<p>Comparison of whole blood thiamine levels in patients with active cancer compared to matched controls.</p>
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8 pages, 2720 KiB  
Case Report
Placental Infection with Different SARS-CoV-2 Variants Leading to Stillbirth: Report of Two Cases
by Miriam A. Snow, Medini K. Annavajhala, Sofia Z. Moscovitz, Anne-Catrin Uhlemann and Larisa Debelenko
COVID 2025, 5(1), 8; https://doi.org/10.3390/covid5010008 (registering DOI) - 4 Jan 2025
Abstract
SARS-CoV-2 placental infection, also known as placentitis (SP), is an established cause of stillbirth; however, this pathology is rare and its incidence across different viral variants is unknown. We report two new cases of SP-associated stillbirth in the third trimester of pregnancy. The [...] Read more.
SARS-CoV-2 placental infection, also known as placentitis (SP), is an established cause of stillbirth; however, this pathology is rare and its incidence across different viral variants is unknown. We report two new cases of SP-associated stillbirth in the third trimester of pregnancy. The cases were identified by a retrospective review of 84 fetal autopsies performed at our institution from 1 March 2020 to 1 March 2024. In one case, the mother was previously healthy and asymptomatic for COVID-19. In the second case, the mother had a history of multiple sclerosis (MS) and suffered recurrent moderate-to-severe COVID-19. In both cases, the placentas showed SP with massive perivillous fibrin deposition (PVFD), involving more than 90% of placental discs, resulting in placental insufficiency and lethal hypoxic–ischemic injury to the fetuses. Placental tissues were positive for SARS-CoV-2 by in situ hybridization (ISH) and immunohistochemistry (IHC). Sequencing revealed the delta variant in Case 1 and omicron XBB.1.515 in Case 2. The data demonstrate that SP, albeit rare, continues to cause intrauterine fetal demise (IUFD) across viral variants regardless of the clinical severity of the infection. The persistence of rare cases of SP as COVID-19 becomes globally endemic emphasizes the importance of disease prevention in pregnancy. Full article
(This article belongs to the Section Human or Animal Coronaviruses)
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<p>Gross and microscopic placental pathology, Case 1. (<b>A</b>) Slice of placental tissue with diffuse parenchymal consolidation and subchorionic hematoma; (<b>B</b>) microscopy of the placenta with chorionic villi (CV) encased in fibrillary material occupying maternal perivillous space, the so-called massive perivillous fibrin deposition (PVFD), with areas of mixed inflammatory infiltrates (intervillositis, IVS). Hematoxylin–eosin stain, x200; (<b>C</b>) immunohistochemical detection of SARS-CoV-2 nucleocapsid protein with signal (brown chromogen) in trophoblastic lining (arrows) of chorionic villi (CV), endothelium of fetal capillaries (asterisk), and villous stromal cells (arrowheads). Anti-SARS-CoV-2 nucleocapsid rabbit monoclonal antibody, clone 0001 (mAb 001); dilution 1:5000 (Sino Biological, Wayne, PA, USA), x400.</p>
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<p>Gross and microscopic placental pathology, Case 2. (<b>A</b>) Slice of placental tissue with diffuse parenchymal consolidation and scattered small hemorrhages; (<b>B</b>) microscopy of the placenta with chorionic villi (CV) encased in perivillous fibrin with extensive areas of intervillous inflammation (IVS). Hematoxylin–eosin stain, x200; (<b>C</b>) in situ hybridization with double-stranded RNA probe showing SARS-CoV-2 signal (brown chromogen) in trophoblastic lining (arrows) of chorionic villi (CV). RNAscope-ProbeV-nCoV2019-S (Advanced-Cell-Diagnostics, Hayward, CA, USA); x400.</p>
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13 pages, 1722 KiB  
Review
Cardiovascular Profile and Cardiovascular Imaging After Bariatric Surgery: A Narrative Review
by Mihaela Toader, Liliana Gheorghe, Costin Chirica, Ionuț-Alexandru Ghicu, Sabina-Ioana Chirica, Andreea Isabela Mazga, Danisia Haba, Mădălina Maxim, Ancuța Andreea Miler, Daniela Crișu, Mihai Ștefan Cristian Haba and Daniel Vasile Timofte
Medicina 2025, 61(1), 73; https://doi.org/10.3390/medicina61010073 (registering DOI) - 4 Jan 2025
Abstract
Background and Objectives: Up until now, behavioral interventions and pharmacological therapies were the main approach available for the management of obesity. Diet and exercise, when used as a singular therapeutic method, are inadequate for a successful outcome. Research shows promising results for [...] Read more.
Background and Objectives: Up until now, behavioral interventions and pharmacological therapies were the main approach available for the management of obesity. Diet and exercise, when used as a singular therapeutic method, are inadequate for a successful outcome. Research shows promising results for the surgical treatment of obesity, especially in the area of bariatric surgery (BaS). The relevance of this study is the valuable analysis of the evolution of obese patients with increased cardiovascular risk. Materials and Methods: The patients eligible for BaS commonly suffer from multiple chronic conditions, including type 2 diabetes, obstructive sleep apnea, cardiovascular diseases, and non-alcoholic fatty liver disease. Additionally, obesity contributes to an increased probability of developing certain types of cancer, osteoarthritis, urinary incontinence, and chronic kidney disease. In this review, we focused especially on the cardiovascular status of obese patients who underwent bariatric procedures. Results: BaS has been found to be strongly associated with a reduced incidence of severe complications in individuals with a history of myocardial infarction (MI) and severe obesity. Specifically, this procedure is linked to a lower occurrence of major adverse cardiovascular events and a decrease in overall mortality. Also, BaS is correlated with a reduced risk of recurrent MI and the development of new-onset heart failure. Conclusions: The results of BaS involve a significant amelioration of the BMI, contributing to a considerable decrease in cardiovascular risk factors and to a notable refinement in the cardiovascular structure and function. Full article
(This article belongs to the Section Surgery)
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<p>Illustrating the treatment for overweight and obesity.</p>
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<p>Illustrating the body mass index (BMI), a tool that healthcare providers use to estimate the amount of body fat by using mass and height measurements.</p>
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<p>Illustrating computed tomography imaging for the quantification of cardiac and abdominal fat distribution by measuring the thickness of the perivisceral and subcutaneous adipose tissue. Axial sections: (<b>A</b>,<b>C</b>)—pericardial fat thickness, (<b>B</b>)—epicardial fat thickness, (<b>D</b>)—abdominal visceral fat density, (<b>E</b>,<b>F</b>)—thickness of subcutaneous abdominal fat (approval was obtained from the Ethics Committee of the University of Medicine and Pharmacy “Grigore T. Popa” Iasi).</p>
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18 pages, 2483 KiB  
Review
Advances in Whole Genome Sequencing: Methods, Tools, and Applications in Population Genomics
by Ying Lu, Mengfei Li, Zhendong Gao, Hongming Ma, Yuqing Chong, Jieyun Hong, Jiao Wu, Dongwang Wu, Dongmei Xi and Weidong Deng
Int. J. Mol. Sci. 2025, 26(1), 372; https://doi.org/10.3390/ijms26010372 (registering DOI) - 4 Jan 2025
Abstract
With the rapid advancement of high-throughput sequencing technologies, whole genome sequencing (WGS) has emerged as a crucial tool for studying genetic variation and population structure. Utilizing population genomics tools to analyze resequencing data allows for the effective integration of selection signals with population [...] Read more.
With the rapid advancement of high-throughput sequencing technologies, whole genome sequencing (WGS) has emerged as a crucial tool for studying genetic variation and population structure. Utilizing population genomics tools to analyze resequencing data allows for the effective integration of selection signals with population history, precise estimation of effective population size, historical population trends, and structural insights, along with the identification of specific genetic loci and variations. This paper reviews current whole genome sequencing technologies, detailing primary research methods, relevant software, and their advantages and limitations within population genomics. The goal is to examine the application and progress of resequencing technologies in this field and to consider future developments, including deep learning models and machine learning algorithms, which promise to enhance analytical methodologies and drive further advancements in population genomics. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
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<p>WGS workflow diagram.</p>
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<p>Evolution of sequencing technology. Note: pink boxes are for first-generation sequencing technology, purple boxes are for second-generation sequencing technology, and green boxes are for third-generation sequencing technology.</p>
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<p>Population genomics analysis methods for whole genome sequencing data. Note: The second circle indicates the three domains of evolutionary traits, genetic structure, and population characteristics for the joint analysis of WGS and population genomics; the third circle indicates the analysis methods for each of the three domains; and the fourth circle indicates the tools or software used for the analysis methods.</p>
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18 pages, 7193 KiB  
Article
A High-Quality Phased Genome Assembly of Stinging Nettle (Urtica dioica ssp. dioica)
by Kaede Hirabayashi, Christopher R. Dumigan, Matúš Kučka, Diana M. Percy, Gea Guerriero, Quentin Cronk, Michael K. Deyholos and Marco Todesco
Plants 2025, 14(1), 124; https://doi.org/10.3390/plants14010124 - 3 Jan 2025
Abstract
Stinging nettles (Urtica dioica) have a long history of association with human civilization, having been used as a source of textile fibers, food and medicine. Here, we present a chromosome-level, phased genome assembly for a diploid female clone of Urtica dioica [...] Read more.
Stinging nettles (Urtica dioica) have a long history of association with human civilization, having been used as a source of textile fibers, food and medicine. Here, we present a chromosome-level, phased genome assembly for a diploid female clone of Urtica dioica from Romania. Using a combination of PacBio HiFi, Oxford Nanopore, and Illumina sequencing, as well as Hi-C long-range interaction data (using a novel Hi-C protocol presented here), we assembled two haplotypes of 574.9 Mbp (contig N50 = 10.9 Mbp, scaffold N50 = 44.0 Mbp) and 521.2 Mbp (contig N50 = 13.5 Mbp, scaffold N50 = 48.0 Mbp), with assembly BUSCO scores of 92.6% and 92.2%. We annotated 20,333 and 20,140 genes for each haplotype, covering over 90% of the complete BUSCO genes and including two copies of a gene putatively encoding the neurotoxic peptide urthionin, which could contribute to nettle’s characteristic sting. Despite its relatively small size, the nettle genome displays very high levels of repetitiveness, with transposable elements comprising more than 60% of the genome, as well as considerable structural variation. This genome assembly represents an important resource for the nettle community and will enable the investigation of the genetic basis of the many interesting characteristics of this species. Full article
(This article belongs to the Special Issue Nettle: From Weed to Green Enterprise)
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<p>Haplotype-resolved assembly of a female <span class="html-italic">Urtica dioica</span> ssp. <span class="html-italic">dioica</span> individual (2n = 26). The two haplotypes are compared (H1 on the right, blue; H2 on the left, yellow). The tracks in the Circos plot represent (<b>a</b>) aligned regions between haplotypes, (<b>b</b>) gene density, (<b>c</b>) TE density, (<b>d</b>) repeats, Shannon diversity score, and (<b>e</b>) predicted centromeric regions, highlighted in black on the ideogram.</p>
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<p>Chromosome structure of the <span class="html-italic">U. dioica</span> genome (<b>a</b>) Hi-C contact map of haplotype H1 and (<b>b</b>) alignment between haplotype H1 and H2 of the <span class="html-italic">U. dioica</span> ssp. <span class="html-italic">dioica</span> genome assembly presented in this study. Only the 13 chromosomes are shown in (<b>a</b>); additional smaller contigs were not plotted for clarity. In (<b>b</b>), blue represents forward strand alignment, and red represents reverse strand alignment.</p>
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<p>The 18.4 Mbp inversion found between haplotypes on chromosome 8 is supported by Hi-C data. In the left panel, Hi-C data are aligned to both haplotypes simultaneously to create a haplotype-aware heatmap. Green lines represent contigs. Only the section of the genome-wide haplotype-aware heatmap corresponding to chromosome 8 is shown; top left contigs correspond to the H1 and bottom right contigs correspond to the H2 versions of chromosome 8. The right panel shows changes in the contact map when Hi-C reads are mapped to modified versions of the assembly, in which the orientation of the large putative inversion on chromosome 8 is flipped in H1 (top) or H2 (bottom). Disruption of (haplotype-aware) Hi-C patterns in both of these cases supports the presence of opposite orientations of the inversion in the two haplotypes.</p>
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<p>Fourier transform spectra of repeats occurrence in (<b>a</b>) <span class="html-italic">Arabidopsis thaliana</span> chromosome 5 with metacentric centromeric signal; (<b>b</b>) <span class="html-italic">Morus notabilis</span> chromosome 2, representative of a holocentric chromosome (Elphinstone et al., 2023 [<a href="#B26-plants-14-00124" class="html-bibr">26</a>]); and (<b>c</b>) <span class="html-italic">U. dioica</span> ssp. <span class="html-italic">dioica</span> chromosome 1 (this study). Colour intensity corresponds to the number of times a specific repeat is found in a 5 kbp window. Bright horizontal lines indicate presence of a repeat sequence that repeats itself many times across that region of the chromosome, such as tandem repeats found in telomeric and centromeric regions. Multiple bands in those regions represent harmonics of the base repeat sequence.</p>
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<p>Comparison of chromosome organization in four species of the Urticaceae family. Estimated divergence times are based on [<a href="#B33-plants-14-00124" class="html-bibr">33</a>]. Note that while the <span class="html-italic">Boehmeria nivea</span> genome is supposed to have 14 chromosomes, the 15th largest scaffold in the assembly contained more than 300 genes and was therefore included in the figure. While the placement of that section of the genome is quite variable across species, comparison with <span class="html-italic">Urtica</span> spp. suggests that it might be part of chromosome 12 in <span class="html-italic">B. nivea</span>.</p>
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18 pages, 450 KiB  
Article
Upper Secondary School Students’ Learning at Work: The Effect on Agency in School
by Maria Erss and Krista Loogma
Soc. Sci. 2025, 14(1), 17; https://doi.org/10.3390/socsci14010017 - 3 Jan 2025
Abstract
In light of the fact that an increasing number of upper secondary school students in Estonia work in parallel with attending school or during school holidays, the purpose of the study was to ascertain whether work experience and the competencies acquired through work [...] Read more.
In light of the fact that an increasing number of upper secondary school students in Estonia work in parallel with attending school or during school holidays, the purpose of the study was to ascertain whether work experience and the competencies acquired through work are, in combination with other school-related (teacher agency support), personal (resilience, achievement in Estonian language, mathematics and history) and socio-demographic (gender and mother tongue) factors, related to student agency in school. The second aim was to broaden the understanding of what students learn at work. The study used a mixed-methods approach involving a survey of upper secondary students (aged 16–19, N = 3179) in 30 schools followed by qualitative interviews with 18–19-year-old students who have gained work experience (N = 13). The analysis comprises a hierarchical linear regression analysis (N = 1947) and a thematic analysis of the interviews. The results indicate that work experience, perseverance, teacher agency support, male gender and Estonian mother tongue are positively related to agency while various skills learned at work had no relationship and student achievement in history was only relevant before work experience was added to the model. The interviews showed that students develop skills related to, e.g., self-regulation, self-awareness, career-awareness, social skills and self-confidence through work. Full article
(This article belongs to the Special Issue Improving Integration of Formal Education and Work-Based Learning)
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<p>Work experience of high school students by type of work.</p>
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20 pages, 1359 KiB  
Review
The Origin, Applications, and Breeding Goals of Jujube in China
by Menghan Wu, Yaoxi Liu, Tingjian Jiang, Yiteng Liu, Zhuo Chen, Xiaofei Wang, Huafeng Yue, Fangdong Li, Gaopu Zhu and Mengmeng Zhang
Horticulturae 2025, 11(1), 37; https://doi.org/10.3390/horticulturae11010037 - 3 Jan 2025
Abstract
Jujube (Ziziphus jujuba Mill.) is one of the three traditional woody crop species in China, where it originated from the middle and lower reaches of the Yellow River. Jujube is considered one of the oldest cultivated fruit trees species in the world, [...] Read more.
Jujube (Ziziphus jujuba Mill.) is one of the three traditional woody crop species in China, where it originated from the middle and lower reaches of the Yellow River. Jujube is considered one of the oldest cultivated fruit trees species in the world, as its utilization can be traced back to more than 7000 years ago. The jujube has important nutritional, economic, and ecological values, hence it is well received by both planters and consumers. At present, jujube cultivation has spread to more than 48 countries and provides a pathway for Chinese farmers to produce a lucrative cash crop. Jujube is regarded as a superfruit of the future due to its excellent nutritional profile. Social progress and economic shifts leading to the improvement of living standards influence the value of jujube to consumers, who have gradually shifted toward functional foods, while at the same time, consumer desires and environmental pressures change the breeding goals for new jujube varieties. In this review, we summarize the origin, classification, and historical, as well as modern, uses of jujube. We also provide some advice on the establishment of breeding objectives in this new period of jujube development. This review aims to provide useful references for researchers new to jujube, to guide shareholders in the jujube industry, and to formulate breeding objectives for the modern development of elite jujube cultivars. Full article
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<p>Four different types of jujube products, namely, dried jujube (<b>a</b>), fresh jujube (<b>b</b>), sour jujube (<b>c</b>) and processed jujube (<b>d</b>–<b>f</b>). Pictures were downloaded from the internet, as indicated. (<b>a</b>) Dried jujube (<a href="https://huaban.com/pins/3658437293" target="_blank">https://huaban.com/pins/3658437293</a>, accessed on 23 December 2020); (<b>b</b>) Fresh jujube (<a href="https://huaban.com/pins/2720686089" target="_blank">https://huaban.com/pins/2720686089</a>, accessed on 11 September 2019); (<b>c</b>) Sour jujube (<a href="https://www.photophoto.cn/pic/28472242.html" target="_blank">https://www.photophoto.cn/pic/28472242.html</a>, accessed on 12 September 2017); (<b>d</b>) Candied jujube (<a href="https://www.douyin.com/note/7209765186461256964" target="_blank">https://www.douyin.com/note/7209765186461256964</a>, accessed on 13 March 2023) and (<b>e</b>) (<a href="http://www.zhe2.com/note/542074627322" target="_blank">http://www.zhe2.com/note/542074627322</a>, accessed on 15 June 2023); and (<b>f</b>) smoky red date (<a href="https://baijiahao.baidu.com/s?id=1580767502782247712" target="_blank">https://baijiahao.baidu.com/s?id=1580767502782247712</a>, accessed on 10 June 2017).</p>
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<p>Comparison of important characters between ‘Zhongzao 1’ and ‘Xinzhenghuizhao’. (<b>a</b>) Number of flowers of ‘Zhongzao 1’ and ‘Xinzhenghuizhao’; (<b>b</b>) Images of fruit and fruit pit of ‘Zhongzao 1’ and ‘Xinzhenghuizao’; (<b>c</b>) Average fruit weight of ‘Zhongzao 1’ and ‘Xingzhenghuizao’; ** indicates a significant difference at <span class="html-italic">p</span> &lt; 0.01, <span class="html-italic">n</span> = 30. (<b>d</b>) Images of ‘Zhongzao 1’ tree that was not girdled and ‘Xingzhenghuizao’ tree that was girdled.</p>
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20 pages, 1692 KiB  
Article
Serum hsa-miR-22-3p, hsa-miR-885-5p, Lipase-to-Amylase Ratio, C-Reactive Protein, CA19-9, and Neutrophil-to-Lymphocyte Ratio as Prognostic Factors in Advanced Pancreatic Ductal Adenocarcinoma
by Jakub Wnuk, Dorota Hudy, Joanna Katarzyna Strzelczyk, Łukasz Michalecki, Kamil Dybek and Iwona Gisterek-Grocholska
Curr. Issues Mol. Biol. 2025, 47(1), 27; https://doi.org/10.3390/cimb47010027 - 3 Jan 2025
Abstract
Pancreatic cancer (PC) is the seventh most common cause of cancer-related death worldwide. The low survival rate may be due to late diagnosis and asymptomatic early-stage disease. Most patients are diagnosed at an advanced stage of the disease. The search for novel prognostic [...] Read more.
Pancreatic cancer (PC) is the seventh most common cause of cancer-related death worldwide. The low survival rate may be due to late diagnosis and asymptomatic early-stage disease. Most patients are diagnosed at an advanced stage of the disease. The search for novel prognostic factors is still needed. Two miRNAs, miR-22-3p and miR-885-5p, which show increased expression in PC, were selected for this study. The aim of this study was to evaluate the utility of these miRNAs in the prognosis of PC. Other prognostic factors such as lipase-to-amylase ratio (LAR), neutrophil-to-lymphocyte ratio (NLR), and carbohydrate antigen 19-9 (CA19-9) were also evaluated in this study. This study was conducted in 50 patients previously diagnosed with pancreatic ductal adenocarcinoma in clinical stage (CS) III and IV. All patients underwent a complete medical history, physical examination, and routine laboratory tests including a complete blood count, C-reactive protein (CRP), CA19-9, lipase, and amylase. Two additional blood samples were taken from each patient to separate plasma and serum. Isolation of miRNA was performed using TRI reagent with cel-miR-39-3p as a spike-in control. Reverse transcription of miRNA was performed using a TaqMan Advanced miRNA cDNA Synthesis Kit. The relative expression levels of miR-22-3p and miR-885-5p were measured using RT-qPCR. Serum hsa-miR-22-3p was detected in 22 cases (44%), while hsa-miR-885-5p was detected in 33 cases (66%). There were no statistically significant differences in serum or plasma miRNA expression levels between patient groups based on clinical stage, gender, or BMI. There were no statistically significant differences in LAR between patients with different CS. For NLR, CRP and CA19-9 thresholds were determined using ROC analysis (6.63, 24.7 mg/L and 4691 U/mL, respectively). Cox’s F test for overall survival showed statistically significant differences between groups (p = 0.002 for NLR, p = 0.007 for CRP and p = 0.007 for CA19-9). Utility as prognostic biomarkers was confirmed in univariate and multivariate analysis for CA19-9, CRP, and NLR. The selected miRNAs and LAR were not confirmed as reliable prognostic markers in PC. Full article
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<p>Probability of survival according to clinical stage (Cox’s F test <span class="html-italic">p</span> = 0.043). CS—clinical stage.</p>
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<p>Probability of survival based on an age threshold of 72 years (Cox’s F test <span class="html-italic">p</span> &gt; 0.05; 0.07).</p>
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<p>Probability of survival based on CA19-9 levels (threshold: 4619 U/mL).</p>
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<p>Probability of survival based on C-reactive protein (CRP) level (threshold 24.7 mg/L).</p>
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<p>Probability of survival based on NLR values (threshold: 6.63).</p>
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17 pages, 12513 KiB  
Article
Comparative Analysis of Complete Chloroplast Genomes and Phylogenetic Relationships of 21 Sect. Camellia (Camellia L.) Plants
by Xu Xiao, Juyan Chen, Zhaohui Ran, Lang Huang and Zhi Li
Genes 2025, 16(1), 49; https://doi.org/10.3390/genes16010049 - 3 Jan 2025
Abstract
Background: Section Camellia is the most diverse group in the genus Camellia L., and this group of plants has a long history of cultivation in China as popular ornamental flowers and oil plants. Sect. Camellia plants present diverse morphological variations and complexity [...] Read more.
Background: Section Camellia is the most diverse group in the genus Camellia L., and this group of plants has a long history of cultivation in China as popular ornamental flowers and oil plants. Sect. Camellia plants present diverse morphological variations and complexity among species, resulting in uncertainty in the classification of species, which has resulted in a degree of inconvenience and confusion in the use of plant resources and research. Methods: Here, We sequenced and assembled the chloroplast genomes of 6 sect. Camellia and performed comparative chloroplast genome analysis and phylogenetic studies combined with 15 existing sect. Camellia plants. Results: The chloroplast genome of 21 species in sect. Camellia species were quadripartite with length of 156,587–157,068 bp base pairs (bp), and a highly conserved and moderately differentiated chloroplast genome arrangement. The 21 sect. Camellia chloroplast genomes were similar to those of angiosperms, with high consistency in gene number, gene content and gene structure. After the annotation process, we identified a total of 132 genes, specifically 87 sequences coding for proteins (CDS), 37 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. The ycf1 gene in 21 species of the sect. Camellia was present only in the small single-copy/inverted repeat of a (SSC/IRa) region. Sequence variation was greater in the large single-copy (LSC) region than in the IR region, and the majority of the protein-coding genes presented high codon preferences. The chloroplast genomes of 21 plant species exhibit relatively conserved SC (single copy region)/IR (inverted repeat region) boundaries. We detected a total of 2975 single sequence repeats (SSRs) as well as 833 dispersed nuclear elements (INEs). Among these SSRs, A/T repeats and AT/AT repeats dominated, while among INEs, forward repeats and palindromic repeats predominated. Codon usage frequencies were largely similar, with 30 high-frequency codons detected. Comparative analysis revealed five hotspot regions (rps16, psaJ, rpl33, rps8, and rpl16) and two gene intervals (atpH-atpI and petD-rpoA) in the cp genome, which can be used as potential molecular markers. In addition, the phylogenetic tree constructed from the chloroplast genome revealed that these 21 species and Camellia oleifera aggregated into a single branch, which was further subdivided into two evolutionarily independent sub-branches. Conclusions: It was confirmed that sect. Camellia and C. oleifera Abel are closely related in Camellia genus. These findings will enhance our knowledge of the sect. Camellia of plants, deepen our understanding of their genetic characteristics and phylogenetic pathways, and provide strong support for the scientific development and rational utilization of the plant resources of the sect. Camellia. Full article
(This article belongs to the Special Issue Genetics and Genomics in Horticultural Plants)
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<p>Schematic spectrum of the chloroplast genome structure (<span class="html-italic">Camellia paucipetala</span>).</p>
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<p>Comparative analysis of repetitive sequences in 21 chloroplast genomes of sect. <span class="html-italic">Camellia</span>. (<b>A</b>): the number of SSRs of six types; (<b>B</b>): the number of SSRs in the different regions; (<b>C</b>): the number of SSRs for the different gene intervals; (<b>D</b>): the number of INEs of four types; (<b>E</b>): the lengths of the INEs of the four types; from left to right, forward repeats, palindromic repeats, reverse repeats, and complementary repeats; (<b>F</b>): the number of SSRs of different repetitive units.</p>
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<p>IR boundary analysis of 21 chloroplasts from sect. <span class="html-italic">Camellia</span>.</p>
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<p><span class="html-italic">C. azalea</span> was used as the reference sequence. Comparative sequence similarity analysis of the 21 chloroplast genomes.</p>
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<p>Nucleotide polymorphisms (Pi) of the 21 chloroplast genomes (window length: 800 bp; step size: 200 bp). (<b>A</b>): Nucleic acid polymorphism analysis of common genes; (<b>B</b>): Nucleic acid polymorphism analysis of common intergenic regions.</p>
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<p>RSCU values for codons and stop codons encoding 20 amino acids in 21 chloroplast genomes. Each column in the bar graph represents one species.</p>
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<p>Phylogenetic tree obtained via the maximum likelihood (ML) and Bayesian inference (BI) methods for sect. <span class="html-italic">Camellia</span>, for 21 species on the basis of complete genomes. (Blue bold font indicates the six newly sequenced species).</p>
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15 pages, 2860 KiB  
Article
Systematic Analysis of Cotton RING E3 Ubiquitin Ligase Genes Reveals Their Potential Involvement in Salt Stress Tolerance
by Hao Li, Yizhen Chen, Mingchuan Fu, Liguo Wang, Renzhong Liu and Zhanji Liu
Int. J. Mol. Sci. 2025, 26(1), 359; https://doi.org/10.3390/ijms26010359 - 3 Jan 2025
Abstract
The Really Interesting New Gene (RING) E3 ubiquitin ligases represent the largest class of E3 ubiquitin ligases involved in protein degradation and play a pivotal role in plant growth, development, and environmental responses. Despite extensive studies in numerous plant species, the functions of [...] Read more.
The Really Interesting New Gene (RING) E3 ubiquitin ligases represent the largest class of E3 ubiquitin ligases involved in protein degradation and play a pivotal role in plant growth, development, and environmental responses. Despite extensive studies in numerous plant species, the functions of RING E3 ligases in cotton remain largely unknown. In this study, we performed systematic identification, characterization, and expression analysis of RING genes in cotton. A total of 514, 509, and 914 RING genes were identified in Gossypium arboretum, G. raimondii, and G. hirsutum, respectively. Duplication analysis indicates that segmental duplication may be the primary mechanism responsible for the expansion of the cotton RING gene family. Moreover, the Ka/Ks analysis suggests that these duplicated genes have undergone purifying selection throughout the evolutionary history of cotton. Notably, 393 G. hirsutum RING genes exhibited differential expression in response to salt stress. The overexpression of the specific C3H2C3 RING gene, GhZFRG1, in Arabidopsis resulted in enhanced tolerance to salt stress. This study contributes to our understanding of the evolution of cotton RING ligases and paves the way for further functional analysis of the RING E3 ligase genes in cotton. Full article
(This article belongs to the Special Issue Plant Responses to Biotic and Abiotic Stresses)
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<p>Distance variation between ml pairs in <span class="html-italic">G. hirsutum</span> RING domains. (<b>A</b>) Distance variation between ml pairs ml1–ml2, ml3–ml4, ml4–ml5, ml5–ml6, and ml7–ml8. (<b>B</b>) Comparison of the number of amino acids in the loops between ml2 and ml3, and ml6 and ml7 of the RING-H2, RING-HCa, RING-HCb, RING-v, and RING-C2 domains. ml denotes metal ligand. Xn indicates the number of amino acids observed between two conserved metal ligands.</p>
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<p>Duplicated <span class="html-italic">RING</span> gene pairs in the <span class="html-italic">G. hirsutum</span> genome. The 973 duplication pairs are indicated by blue lines (<a href="#app1-ijms-26-00359" class="html-app">Table S2</a>). The chromosomes A01–A13 and D01–D13 are represented by different colors. The scale bar displayed on each chromosome denotes the chromosomal length in megabases (Mb).</p>
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<p>Synteny analysis of <span class="html-italic">RING</span> genes between <span class="html-italic">G. hirsutm</span> and other plant species. At, Gr, Ga, and Gh indicate <span class="html-italic">A. thaliana</span>, <span class="html-italic">G. raimondii</span>, <span class="html-italic">G. arboretum</span>, and <span class="html-italic">G. hirsutum</span>, respectively. The numbers 1 to 5, and 01 to 13 indicate different chromosomes. The grey lines in the background represent the collinear blocks within the respective compared genomes, while the colored lines show the collinear <span class="html-italic">RING</span> gene pairs (<a href="#app1-ijms-26-00359" class="html-app">Table S3</a>).</p>
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<p>Expression profiles of the 144 <span class="html-italic">G. hirsutum RING</span> genes under salinity stress. Expression patterns of <span class="html-italic">G. hirsutum RING</span> genes determined from reanalysis of publicly available transcriptome data from the roots of cotton cultivar GX100-2 (SRP343057). The heat map was constructed based on transcript levels, calculated as fragments per kilobase of the exon model per million mapped fragments (FPKM). DEGs were identified using the DESeq2 R packages (1.16.1), with a cutoff of |log<sub>2</sub><sup>FC</sup>| ≥ 1 and <span class="html-italic">P</span>-adj ≤ 0.05. The selection of these 144 <span class="html-italic">RING</span> genes was based on their differential expression in at least two salt stress time points. The values marked on round rectangles correspond to the log<sub>2</sub><sup>FC</sup> values. The scale represents the relative expression levels, with red indicating higher expression and blue indicating lower expression. The <span class="html-italic">RING</span> genes highlighted in pale blue are tandemly duplicated genes.</p>
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<p>GhZFRG1 is a nuclear-localized RING-H2-type protein. (<b>A</b>) Diagram of the domain structure of GhZFRG1. The RING domain was highlighted in red. The amino acid sequence of the RING domain is presented below, with red amino acids indicating the conserved cysteine (<b>C</b>) and histidine (H) residues that form the zinc finger. (<b>B</b>) Subcellular localization of GhZFRG1 in Arabidopsis protoplasts. Transient expression of 35S::GhZFRG1-GFP or 35S::GFP was performed in Arabidopsis protoplasts. The scale bar is 5 μm. (<b>C</b>) Time course analysis of the relative GhZFRG1 expression levels in response to salt stress. The data represent the means ± SD of three independent assays. Significant differences were indicated as ** (<span class="html-italic">t</span>-test, <span class="html-italic">p</span> &lt; 0.01) between the treatment and control.</p>
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<p><span class="html-italic">GhZFRG1</span> enhances salt tolerance in Arabidopsis. (<b>A</b>) Seedlings from wild type (WT) and <span class="html-italic">GhZFRG1</span> overexpression (OE) lines grown under normal conditions (0 mM NaCl) or different salt stress treatments (100 or 150 mM NaCl). (<b>B</b>) The root length of the seedlings under the specified conditions. (<b>C</b>) The fresh weight of the seedling under the specified conditions. The three transgenic lines (OE2, OE7 and OE9) and the WT seeds were germinated on MS medium. Subsequently, the one-week-old seedlings were transferred to MS medium containing different concentrations of NaCl (0, 100 and 150 mM). Finally, the root length and fresh weight were measured after five days of growth. The data represent the means ± SD of three independent assays. Significant differences were indicated as * (<span class="html-italic">t</span>-test, <span class="html-italic">p</span> &lt; 0.05) and ** (<span class="html-italic">p</span> &lt; 0.01) between the WT and OE.</p>
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28 pages, 6449 KiB  
Review
A Review of Matrix Converters in Motor Drive Applications
by Annette von Jouanne, Emmanuel Agamloh and Alex Yokochi
Energies 2025, 18(1), 164; https://doi.org/10.3390/en18010164 - 3 Jan 2025
Abstract
A matrix converter (MC) converts an AC source voltage into a variable-voltage variable-frequency AC output voltage (direct AC-AC) without an intermediate DC-link capacitance. By eliminating the traditional DC-link capacitor, MCs can achieve higher power densities and reliability when compared to conventional AC-DC-AC converters. [...] Read more.
A matrix converter (MC) converts an AC source voltage into a variable-voltage variable-frequency AC output voltage (direct AC-AC) without an intermediate DC-link capacitance. By eliminating the traditional DC-link capacitor, MCs can achieve higher power densities and reliability when compared to conventional AC-DC-AC converters. MCs also offer the following characteristics: total semiconductor solution, sinusoidal input and output currents, bidirectional power flow and controllable input power factor. This paper reviews the history, recent developments and commercialization of MCs and discusses several technical requirements and challenges, including bidirectional switches, wide bandgap (WBG) opportunities using GaN and SiC, overvoltage protection, electromagnetic interference (EMI) and ride-through in motor drive applications. MC design solutions and operation are discussed, including a comparison of control and modulation techniques as well as the detailed development of space vector modulation (SVM) to provide a deep insight into the control implementation and results. The paper concludes with compelling motor drive innovation opportunities made possible by advanced MCs including fully integrated and multiphase systems. For conventional MCs, size reductions of 30% are reported, as well as efficiencies of 98% and low input current total harmonic distortion of 3–5%. Full article
(This article belongs to the Section F: Electrical Engineering)
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<p>VFD: (<b>a</b>) diode rectifier front-end, (<b>b</b>) active rectifier front-end enabling regeneration.</p>
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<p>Distribution of faults in power electronic converters, adapted from [<a href="#B7-energies-18-00164" class="html-bibr">7</a>,<a href="#B21-energies-18-00164" class="html-bibr">21</a>].</p>
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<p>Direct 3 × 3 MC motor drive topology: (<b>a</b>) schematic diagram representing the (<b>b</b>) symbol, with the filled circles showing which switches are on/closed (<span class="html-italic">SaA</span>, <span class="html-italic">SbB</span> and <span class="html-italic">SbC</span>) corresponding to switching state “<span class="html-italic">abb</span>” (adapted and modified from [<a href="#B30-energies-18-00164" class="html-bibr">30</a>]).</p>
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<p>Indirect matrix converter (IMC) topology (adapted and modified from [<a href="#B49-energies-18-00164" class="html-bibr">49</a>]).</p>
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<p>Publication statistics on the topic of MCs through to the end of 2023 (last complete year prior to the analysis).</p>
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<p>System topology of three-phase MCs (adapted and modified from [<a href="#B66-energies-18-00164" class="html-bibr">66</a>]).</p>
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<p>Configurations and characteristics of bidirectional switches: (<b>a</b>) diode bridge, (<b>b</b>) common emitter, (<b>c</b>) common collector, (<b>d</b>) RB-IGBT, (<b>e</b>) bidirectional-GaN switch (adapted and modified from [<a href="#B68-energies-18-00164" class="html-bibr">68</a>]).</p>
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<p>WBG SiC and GaN material properties compared with Si (using data from [<a href="#B71-energies-18-00164" class="html-bibr">71</a>,<a href="#B72-energies-18-00164" class="html-bibr">72</a>]).</p>
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<p>Nine-switch GaN MC using two devices in series on the same die (adapted and modified from [<a href="#B87-energies-18-00164" class="html-bibr">87</a>]).</p>
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<p>EMI filter structure with two-stage C-L-C-L input filter and two-stage L-C-L-C output filter (adapted and modified from [<a href="#B89-energies-18-00164" class="html-bibr">89</a>]).</p>
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<p>MC with auxiliary ride-through module consisting of switches SiA, SiB and SiC and capacitor C<sub>dc</sub> (adapted and modified from [<a href="#B94-energies-18-00164" class="html-bibr">94</a>]).</p>
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<p>The 27 allowed switching states in an MC subdivided into the three vector groups (adapted from [<a href="#B30-energies-18-00164" class="html-bibr">30</a>]).</p>
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<p>Stationary vector representation in the <span class="html-italic">αβ</span> coordinate plane (<b>a</b>) output voltage SSVs and (<b>b</b>) input current SSVs [<a href="#B30-energies-18-00164" class="html-bibr">30</a>].</p>
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<p>SVM principle to construct (<b>a</b>) <math display="inline"><semantics> <mrow> <msub> <mrow> <mover accent="false"> <mrow> <mi>v</mi> </mrow> <mo>¯</mo> </mover> </mrow> <mrow> <mn>0</mn> </mrow> </msub> </mrow> </semantics></math> and (<b>b</b>) <math display="inline"><semantics> <mrow> <msub> <mrow> <mover accent="false"> <mrow> <mi>i</mi> </mrow> <mo>¯</mo> </mover> </mrow> <mrow> <mi>i</mi> </mrow> </msub> </mrow> </semantics></math> [<a href="#B30-energies-18-00164" class="html-bibr">30</a>].</p>
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<p>Symmetric double-sided switching pattern for the switching period <span class="html-italic">T<sub>s</sub></span> [<a href="#B30-energies-18-00164" class="html-bibr">30</a>].</p>
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<p>MC driving an RL load modeled for simulation (adapted from [<a href="#B30-energies-18-00164" class="html-bibr">30</a>]).</p>
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<p>Simulated (<b>a</b>) input phase voltages and (<b>b</b>) output line-to-line voltage <math display="inline"><semantics> <mrow> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>B</mi> <mi>C</mi> </mrow> </msub> </mrow> </semantics></math> of the MC of <a href="#energies-18-00164-f016" class="html-fig">Figure 16</a> controlled by SVM [<a href="#B30-energies-18-00164" class="html-bibr">30</a>].</p>
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17 pages, 247 KiB  
Article
Unkept Promises: On the Implementation of the OECD Anti-Bribery Convention in Korea
by Dae Un Hong and Jae Sun Kim
Laws 2025, 14(1), 4; https://doi.org/10.3390/laws14010004 - 3 Jan 2025
Abstract
While the Organization for Economic Cooperation and Development (OECD)’s Anti-Bribery Convention is often considered a success in the fight against global corruption, ensuring its implementation remains challenging. As evidenced by the sustained decline in Transparency International’s ratings, the Korean government does not actively [...] Read more.
While the Organization for Economic Cooperation and Development (OECD)’s Anti-Bribery Convention is often considered a success in the fight against global corruption, ensuring its implementation remains challenging. As evidenced by the sustained decline in Transparency International’s ratings, the Korean government does not actively enforce anti-bribery legislation against companies and individuals engaged in business activities abroad. To support this argument, this article reviews the Korean legal apparatus designed to control foreign bribery and examines why the relevant authorities have insufficiently enforced them. Specifically, this paper discusses the Foreign Bribery Prevention Act, its legislative history, how the Korean legislature has failed to implement the OECD Working Group’s recommendations in a timely manner, and the consequences of this failure. Through a case study, this paper compares the practices of Korean law enforcement authorities with those of their counterparts abroad, particularly in the United States. This paper also illustrates how the traditional leniency of Korean prosecutors and judges toward bribe giving, especially by large conglomerates, has affected the enforcement of the relatively new legal apparatus designed to combat bribery of foreign public officials. Furthermore, a cultural leniency toward bribery, coupled with the Korean government’s unwillingness to raise public awareness of foreign bribery crimes and their punishments, poses a significant challenge to combating foreign bribery. Full article
(This article belongs to the Special Issue Criminal Liability and Global Compliance)
8 pages, 1162 KiB  
Case Report
Umbilical Artery Thrombosis Masquerading as Single Umbilical Artery in a Stillbirth
by Yin Ping Wong, Rahana Abd Rahman, Ay Eeng Tan and Geok Chin Tan
Diagnostics 2025, 15(1), 94; https://doi.org/10.3390/diagnostics15010094 - 3 Jan 2025
Viewed by 103
Abstract
Background: Umbilical artery thrombosis (UAT) masquerading as a single umbilical artery (SUA) is a rare but critical diagnostic challenge in prenatal care. Case Presentation: We described a case of a 22-year-old primigravida with an uneventful obstetric history who presented with reduced fetal movements [...] Read more.
Background: Umbilical artery thrombosis (UAT) masquerading as a single umbilical artery (SUA) is a rare but critical diagnostic challenge in prenatal care. Case Presentation: We described a case of a 22-year-old primigravida with an uneventful obstetric history who presented with reduced fetal movements at 22 weeks of gestation. Ultrasound showed no gross fetal structural anomalies while umbilical artery Doppler flow imaging revealed an isolated SUA. The patient again presented with diminished fetal movement at 24 weeks gestation, and a diagnosis of intrauterine demise was confirmed ultrasonographically. She was then induced and delivered a macerated stillborn female fetus. Placental examination revealed three umbilical vessels with an occlusive thrombus seen within the umbilical artery consistent with UAT, a finding previously mistaken for SUA. Conclusions: This case underscores the diagnostic difficulties of UAT radiologically, especially when there was no prior documented evidence of two umbilical arteries. Identification of at-risk fetuses would allow for close monitoring or effective interventions to be implemented as early as possible to avert preventable fetal loss. Full article
(This article belongs to the Special Issue An Update on Radiological Diagnosis in 2024)
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<p>Gross placental examination of a stillbirth demonstrating hypercoiled umbilical cord, with a coiling index of 0.8.</p>
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<p>Placental examination of a stillbirth complicated with umbilical artery thrombosis. (<b>A</b>) A section of umbilical artery showing near complete occlusion by thrombus (black arrow) (Haematoxylin and Eosin (H&amp;E), ×40), inset shows normal umbilical cord with patent vessels for comparison. (<b>B</b>) Intraluminal thrombus (black arrow) at higher magnification (H&amp;E, ×200). (<b>C</b>) A section from full thickness of placenta revealed avascular villi (H&amp;E, ×100), inset shows normal placenta comprising chorionic villi with patent vasculature for comparison; and (<b>D</b>) associated stem vessel obliteration (H&amp;E, ×600).</p>
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25 pages, 9826 KiB  
Article
Parametric Estimation of Directional Wave Spectra from Moored FPSO Motion Data Using Optimized Artificial Neural Networks
by Do-Soo Kwon, Sung-Jae Kim, Chungkuk Jin and MooHyun Kim
J. Mar. Sci. Eng. 2025, 13(1), 69; https://doi.org/10.3390/jmse13010069 - 3 Jan 2025
Viewed by 115
Abstract
This paper introduces a comprehensive, data-driven framework for parametrically estimating directional ocean wave spectra from numerically simulated FPSO (Floating Production Storage and Offloading) vessel motions. Leveraging a mid-fidelity digital twin of a spread-moored FPSO vessel in the Guyana Sea, this approach integrates a [...] Read more.
This paper introduces a comprehensive, data-driven framework for parametrically estimating directional ocean wave spectra from numerically simulated FPSO (Floating Production Storage and Offloading) vessel motions. Leveraging a mid-fidelity digital twin of a spread-moored FPSO vessel in the Guyana Sea, this approach integrates a wide range of statistical values calculated from the time histories of vessel responses—displacements, angular velocities, and translational accelerations. Artificial neural networks (ANNs), trained and optimized through hyperparameter tuning and feature selection, are employed to estimate wave parameters including the significant wave height, peak period, main wave direction, enhancement parameter, and directional-spreading factor. A systematic correlation analysis ensures that informative input features are retained, while extensive sensitivity tests confirm that richer input sets notably improve predictive accuracy. In addition, comparisons against other machine learning (ML) methods—such as Support Vector Machines, Random Forest, Gradient Boosting, and Ridge Regression—demonstrate the present ANN model’s superior ability to capture intricate nonlinear interdependencies between vessel motions and environmental conditions. Full article
(This article belongs to the Special Issue Advances in Storm Tide and Wave Simulations and Assessment)
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<p>Designed FPSO model with mooring lines (orange lines) and steel catenary riser (blue line).</p>
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<p>Wave scatter diagram, where numbers in the diagram are occurrence (<b>a</b>), wave rose (<b>b</b>), wind rose (<b>c</b>), and current rose values (<b>d</b>) (longitude: −56 degrees E; latitude: 10 degrees N; it is from this direction that waves, winds, and currents are coming, and all directions are measured clockwise from the north).</p>
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<p>Training (red box) and test (blue box) datasets for environmental conditions ((<b>a</b>): wind speed; (<b>b</b>): wind direction; (<b>c</b>): current speed; (<b>d</b>): current direction; (<b>e</b>): significant wave height; (<b>f</b>): peak period; (<b>g</b>): wave direction; (<b>h</b>): enhancement parameter; (<b>i</b>): spreading factor).</p>
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<p>Wave conditions for the training set for ML based on ERA5 data.</p>
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<p>Time series and spectra of wave elevation and 6DOF motion displacements.</p>
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<p>Layout of feedforward algorithm.</p>
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<p>Architecture of ANN for estimating directional wave spectrum.</p>
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<p>Feature correlation heatmap of input variables and wave parameters (in the figure, mean and std stand for mean value and standard deviation; <span class="html-italic">STDR</span> stands for relative standard deviation; <span class="html-italic">m</span>0, <span class="html-italic">m</span>2, and <span class="html-italic">m</span>4 represent the zeroth, second, and fourth spectral moments; <math display="inline"><semantics> <mrow> <msub> <mi>T</mi> <mi>c</mi> </msub> </mrow> </semantics></math>, <math display="inline"><semantics> <mrow> <msub> <mi>T</mi> <mi>z</mi> </msub> </mrow> </semantics></math>, and <span class="html-italic">BW</span> are the mean crest periods, the mean up-crossing periods, and the spectral bandwidth; the numbers 1–6 represent surge, sway, heave, roll, pitch, and yaw displacements, 7–9 denote angular velocities with respect to the x, y, and z axes, and 10–12 represent x, y, and z accelerations, respectively).</p>
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<p>Series plot of 1200 cases—<math display="inline"><semantics> <mrow> <msub> <mi>H</mi> <mi>s</mi> </msub> </mrow> </semantics></math> and a large correlation (<span class="html-italic">m</span>4_10: the fourth spectral moments of surge acceleration), median correlation (<span class="html-italic">m</span>4_11: the fourth spectral moments of sway acceleration), and low correlation (<math display="inline"><semantics> <mrow> <msub> <mi>T</mi> <mi>c</mi> </msub> </mrow> </semantics></math>_11: crest period of sway acceleration) with <math display="inline"><semantics> <mrow> <msub> <mi>H</mi> <mi>s</mi> </msub> </mrow> </semantics></math>, respectively.</p>
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<p>Regression plots for the estimation of each wave parameter using the mean and standard deviation of 6DOF motions as input (the number of inputs = 12) ((<b>a</b>): significant wave height; (<b>b</b>): wave peak period; (<b>c</b>): wave direction; (<b>d</b>): enhancement parameter; (<b>e</b>): spreading factor).</p>
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<p>Regression plots for the estimation of each wave parameter using the mean and standard deviation of 12DOF motions as input (the number of inputs = 24) ((<b>a</b>): significant wave height; (<b>b</b>): wave peak period; (<b>c</b>): wave direction; (<b>d</b>): enhancement parameter; (<b>e</b>): spreading factor).</p>
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<p>Regression plots for the estimation of main wave direction while applying thresholds to correlations between input and output variables ((<b>a</b>): 119 input variables; (<b>b</b>): more than 10% correlated variables; (<b>c</b>): more than 20% correlated variables; (<b>d</b>): more than 30% correlated variables; (<b>e</b>): more than 40% correlated variables; (<b>f</b>): more than 50% correlated variables).</p>
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<p><math display="inline"><semantics> <mrow> <msup> <mi>R</mi> <mn>2</mn> </msup> </mrow> </semantics></math> values of wave parameters from different ML models.</p>
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<p>Regression plots for the estimation of each wave parameter using 119 input variables ((<b>a</b>): significant wave height; (<b>b</b>): wave peak period; (<b>c</b>): wave direction; (<b>d</b>): enhancement parameter; (<b>e</b>): spreading factor).</p>
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<p>Series plot for the estimation of each wave parameter using 119 input variables ((<b>a</b>): significant wave height; (<b>b</b>): wave peak period; (<b>c</b>): wave direction; (<b>d</b>): enhancement parameter; (<b>e</b>): spreading factor).</p>
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<p>Comparison of directional wave spectra (left = actual; right = estimated).</p>
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