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14 pages, 570 KiB  
Article
Long-Term Outcomes and Quality of Life of High-Risk Neuroblastoma Patients Treated with a Multimodal Treatment Including Anti-GD2 Immunotherapy: A Retrospective Cohort Study
by Tim Flaadt, Jonas Rehm, Thorsten Simon, Barbara Hero, Ruth L. Ladenstein, Holger N. Lode, Desiree Grabow, Sandra Nolte, Roman Crazzolara, Johann Greil, Martin Ebinger, Michael Abele, Ursula Holzer, Michaela Döring, Johannes H. Schulte, Peter Bader, Paul-Gerhardt Schlegel, Matthias Eyrich, Peter Lang, Thomas Klingebiel and Rupert Handgretingeradd Show full author list remove Hide full author list
Cancers 2025, 17(1), 149; https://doi.org/10.3390/cancers17010149 (registering DOI) - 5 Jan 2025
Abstract
Background: The incorporation of anti-GD2 antibodies such as ch14.18/SP2/0 into the multimodal treatment of high-risk neuroblastoma (HR-NB) patients has improved their outcomes. As studies assessing the long-term outcomes, long-term sequelae, and health-related quality of life (HRQoL) of this treatment are limited, this retrospective [...] Read more.
Background: The incorporation of anti-GD2 antibodies such as ch14.18/SP2/0 into the multimodal treatment of high-risk neuroblastoma (HR-NB) patients has improved their outcomes. As studies assessing the long-term outcomes, long-term sequelae, and health-related quality of life (HRQoL) of this treatment are limited, this retrospective analysis aimed to explore these. Patients and Methods: Between 1991 and 2002, 65 children received a multimodal treatment, including ch14.18/SP2/0, for primary HR-NB. All received chemotherapy according to the NB90/NB97 trial, 51 received high-dose chemotherapy, and all received ch14.18/SP2/0 treatment. We analyzed the long-term sequelae and HRQoL (EORTC QLQ-C30), and evaluated overall and event-free survival (OS/EFS). Results: Twenty-five survivors were evaluated for HRQoL and long-term effects. All reported long-term sequelae, including ototoxicity in 16/25 (64%), cardiac toxicity in 6/25 (24%), and endocrine toxicity in 19/25 (76%) patients. Chronic diarrhea was reported in 20% of female patients. Seven patients developed autoimmune diseases. HRQoL scores were better across multiple scales than those of the matched German general population. Twenty-five-year OS and EFS were 50.8% (95% confidence interval: 31–55) and 43% (30.1–55.3), with 33 (50.8%) long-term survivors. Thirty-two patients died: 28 (43.1%) because of progression/relapse and 4 (6.2%) because of secondary neoplasms. Conclusions: Multimodal treatment, including ch14.18/SP2/0, can achieve long-term survival in HR-NB patients, with a substantial proportion of survivors reporting better HRQoL compared to the general population. All patients reported long-term side effects mostly attributable to chemotherapy and radiotherapy. The relatively high prevalence of autoimmune diseases and persistent diarrhea warrants additional longitudinal research on individuals treated with anti-GD2 antibodies. Full article
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<p>(<b>A</b>) Overview of the therapy: In the NB90 trial, high-dose chemotherapy (HDC) with autologous stem cell transplantation was optional; however, all patients in the present cohort received HDC. The NB97 trial was a prospective randomized trial comparing HDC with oral maintenance therapy consisting of four cycles of oral cyclophosphamide for days 1–8 every 28 days. ASCT: autologous stem cell transplantation. (<b>B</b>) Details of the study population: 25/33 long-term survivors participated in the long-term survey; the remaining 8 patients did not participate for personal reasons. Nevertheless, the follow-up was updated for these patients. HR-NB: high-risk neuroblastoma. NB90: induction therapy according to German NB90 trial. NB97: induction therapy according to the German NB97 trial. mIBG: iodine meta-iodobenzylguanidine. HDC: high-dose chemotherapy. ASCT: autologous stem cell transplantation. ch14.18/SP2/0: treatment with the chimeric anti-GD2 antibody ch.14.18/SP2/0. SMN: secondary malignancy.</p>
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<p>Overall survival (<b>A</b>), event-free survival (<b>B</b>), cumulative incidence of relapse (<b>C</b>), and incidence of secondary cancers (<b>D</b>) of the whole cohort.</p>
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9 pages, 1237 KiB  
Case Report
Severe Lipoatrophy in a Growth Hormone Deficient Toddler Girl Treated with a Non-Pegylated Long-Acting Growth Hormone
by Atilla Büyükgebiz and And Demir
Children 2025, 12(1), 58; https://doi.org/10.3390/children12010058 (registering DOI) - 4 Jan 2025
Viewed by 331
Abstract
Background: Recombinant growth hormone (rhGH) has been used since 1985 to treat growth hormone (GH)-induced short stature, typically associated with transient adverse events. However, lipoatrophy, characterized by irreversible damage to subcutaneous fat, was first reported in 1999 and linked to antibody formation. In [...] Read more.
Background: Recombinant growth hormone (rhGH) has been used since 1985 to treat growth hormone (GH)-induced short stature, typically associated with transient adverse events. However, lipoatrophy, characterized by irreversible damage to subcutaneous fat, was first reported in 1999 and linked to antibody formation. In 2021, localized lipoatrophy was observed in 14.5% of patients receiving daily rhGH, with repeated injections at the same sites being a common contributing factor. Long-acting rhGH (LAGH) preparation offers the advantage of weekly injections, enhancing patient comfort and adherence to treatment. Methods: This case report discusses a 5.5-year-old girl born at 40 weeks of gestation with a birth weight of 2300 g, diagnosed with idiopathic short stature and borderline GH secretion, along with a history of mild intrauterine growth retardation. Results: After initiating treatment with the non-pegylated fusion protein formulation of LAGH at the standard dose of 0.66 mg/kg body weight weekly, administered by her family, she developed localized lipoatrophy at the injection site within eleven weeks. The injections were performed consistently in the same area of the right upper arm, where lipoatrophy emerged. Following the onset of this adverse effect, her treatment was adjusted to daily rhGH, with strict instructions to rotate injection sites. Despite these clear instructions, follow-up revealed that the parents continued to administer injections with the non-pegylated LAGH fusion protein formulation, this time in the left upper arm, leading to a recurrence of lipoatrophy within eight weeks. Conclusions: The recurrence underscores the importance of proper injection techniques, particularly site rotation, in preventing localized adverse effects. Given the limitations of this case, where the recommended adjustments were not followed by the parents, it is crucial to emphasize that the administration of the preparation should be discontinued immediately upon the appearance of side effects such as lipoatrophy. Individual reactions to drugs are always possible, and this highlights the need for clinician vigilance in monitoring and addressing adverse effects promptly during treatments with LAGH. Full article
(This article belongs to the Section Pediatric Endocrinology & Diabetes)
21 pages, 15466 KiB  
Review
Expanding the Potential of Circular RNA (CircRNA) Vaccines: A Promising Therapeutic Approach
by Tian Bu, Ziyu Yang, Jian Zhao, Yanmei Gao, Faxiang Li and Rong Yang
Int. J. Mol. Sci. 2025, 26(1), 379; https://doi.org/10.3390/ijms26010379 (registering DOI) - 4 Jan 2025
Viewed by 285
Abstract
In recent years, circular RNAs (circRNAs) have garnered significant attention due to their unique structure and function, positioning them as promising candidates for next-generation vaccines. The circRNA vaccine, as an RNA vaccine, offers significant advantages in preventing infectious diseases by serving as a [...] Read more.
In recent years, circular RNAs (circRNAs) have garnered significant attention due to their unique structure and function, positioning them as promising candidates for next-generation vaccines. The circRNA vaccine, as an RNA vaccine, offers significant advantages in preventing infectious diseases by serving as a vector for protein expression through non-canonical translation. Notably, circRNA vaccines have demonstrated enduring antigenic expression and generate a larger percentage of neutralizing antibodies compared to mRNA vaccines administered at the same dosage. Furthermore, circRNA vaccines can elicit robust cellular and humoral immunity, indicating their potential for tumor vaccine development. However, certain challenges must be addressed to facilitate the widespread use of circRNA vaccines in both infectious disease prevention and tumor treatment. These challenges include the low efficiency of linear RNA circularization, the suboptimal targeting of delivery systems, and the assessment of potential side effects. This work aims to describe the characteristics and functions of circRNAs, elucidate the mechanism behind circRNA vaccines, and discuss their applications in the prevention of infectious diseases and the treatment of tumors, along with their potential future applications. Full article
(This article belongs to the Section Molecular Genetics and Genomics)
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<p>Functions of circRNAs. CircRNAs are a type of covalently closed circular single-stranded RNA generated by special variable splicing, and they primarily originate from exons. CircRNAs that arise from exons function in the cytoplasm, while those containing introns play a regulatory role in the nucleus. (<b>A</b>) CircRNAs with MRES can act as sponges for miRNAs in the cytoplasm, competing with target genes for binding to miRNAs and thereby inhibiting the expression of those genes. (<b>B</b>) CircRNAs interact with proteins in several ways. First, they can bind to RBPs, regulating the functions of these proteins. Second, circRNAs can serve as scaffolds for proteins, influencing their interactions. For example, circHIPK3 acts as a protein scaffold, promoting the binding of E3 ubiquitin ligase β-TrCP and HuR, leading to HuR’s ubiquitination and degradation. Third, circRNAs can recruit proteins to specific locations. For instance, circRHOT1 transports KAT5 into the nucleus to interact with the promoter of NR2F6. (<b>C</b>) circRNAs can serve as templates for protein translation when they possess m<sup>6</sup>A modifications or IRES. MREs, microRNA response elements; RBPs, RNA-binding proteins; IRES, internal ribosome entry site; m<sup>6</sup>A, N6-Methyladenosine; EcircRNA, exonic circRNAs; ciRNA, intronic circRNAs; EIcircRNA, exon-intronic circRNAs; BSJ, back-splicing junction.</p>
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<p>The antigens encoded by circular RNA vaccines activate immune responses. CircRNAs are encapsulated by LNPs and enter cells in endosomal form, where they are translated by ribosomes in the cytoplasm into antigenic proteins, which can be cleared of pathogens by both cellular and humoral immunity. Cellular immunity: Antigenic proteins in the cytoplasm are broken down into small antigenic fragments in the proteasome and are presented to cytotoxic T cells (CD8<sup>+</sup> cells) via MHC I. These antigenic fragments stimulate CD8<sup>+</sup> cells to secrete molecules, such as perforins and granzymes, which ultimately destroy the infected cells. Humoral immunity: The secreted antigen can be taken up by APCs and digested in the endosomes, then presented to CD4<sup>+</sup> T cells via MHC II, which provide stimulatory signals such as CD40L to stimulate them to differentiate into plasma cells to produce antibodies, thus, exerting humoral immunity. Additionally, antigens can also directly stimulate B cells to initiate humoral immunity. LNPs, lipid nanoparticles; APCs, antigen-presenting cells; MHC I, major histocompatibility complex I; MHC II, major histocompatibility complex II; CD40L, cluster of differentiation 40 ligand.</p>
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<p>The process for the in vitro synthesis of linear RNA precursors involves several steps. (<b>A</b>) The production of DNA templates can be categorized into two approaches. The first is the construction of a plasmid vector containing the coding circRNA for the antigen, followed by amplification and linearization. Amplification is achieved using DNA polymerase chain reaction (PCR). (<b>B</b>) IVT reaction. The construction of the system using DNA as the template and NTPs as substrates and the properties of RNA polymerase. IVT, in vitro transcription.</p>
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<p>The in vitro circularization process of linear RNA precursors. (<b>A</b>) Chemical strategies for RNA circularization. (<b>B</b>) RNA circularization using T4 ligase; (<b>a</b>) The process of RNA circularization by T4 DNA ligase; (<b>b</b>) The process of RNA circularization by T4 RNA ligase I; (<b>c</b>) The process of RNA circularization by T4 RNA ligase II. (<b>C</b>) RNA circularization using ribozymes; (<b>a</b>) The mechanism of circularization of linear RNA precursors through self-splicing of group I introns; (<b>b</b>) The mechanism of circularization of linear RNA precursors through self-splicing of group II introns; (<b>c</b>) The process of circularization of linear RNA precursors using hairpin ribozymes.</p>
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<p>The application of circular RNAs in infectious disease prevention and tumor therapy. (<b>A</b>) Application of circRNA vaccines in the prevention of infectious diseases. The antigen encoded by a circRNA is presented to CD8<sup>+</sup> T cells, leading to the production of cytokines or chemokines. Alternatively, it can be presented to CD4<sup>+</sup> T cells, which in turn are recognized by B cells, leading to the production of antibodies that are immune to pathogenic microorganisms. (<b>B</b>) Application of circRNA vaccines in tumor therapy. Antigens encoded by circRNAs are recognized by DCs and presented to T cells. Subsequently, T cells present these antigens to B cells, leading to the production of antibodies that target tumor cells, ultimately resulting in the death of tumor cells. DCs, dendritic cells.</p>
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23 pages, 2797 KiB  
Article
Incidence and Impact of Myocarditis in Genetic Cardiomyopathies: Inflammation as a Potential Therapeutic Target
by Yulia Lutokhina, Elena Zaklyazminskaya, Evgeniya Kogan, Andrei Nartov, Valeriia Nartova and Olga Blagova
Genes 2025, 16(1), 51; https://doi.org/10.3390/genes16010051 (registering DOI) - 4 Jan 2025
Viewed by 197
Abstract
Background: Myocardial disease is an important component of the wide field of cardiovascular disease. However, the phenomenon of multiple myocardial diseases in a single patient remains understudied. Aim: To investigate the prevalence and impact of myocarditis in patients with genetic cardiomyopathies and to [...] Read more.
Background: Myocardial disease is an important component of the wide field of cardiovascular disease. However, the phenomenon of multiple myocardial diseases in a single patient remains understudied. Aim: To investigate the prevalence and impact of myocarditis in patients with genetic cardiomyopathies and to evaluate the outcomes of myocarditis treatment in the context of cardiomyopathies. Methods: A total of 342 patients with primary cardiomyopathies were enrolled. The study cohort included 125 patients with left ventricular non-compaction (LVNC), 100 with primary myocardial hypertrophy syndrome, 70 with arrhythmogenic right ventricular cardiomyopathy (ARVC), 60 with dilated cardiomyopathy (DCM), and 30 with restrictive cardiomyopathy (RCM). The diagnosis of myocarditis was based on data from myocardial morphological examination or a non-invasive diagnostic algorithm consisting of an analysis of clinical presentation, anti-cardiac antibody (Ab) titres, and cardiac MRI. Results: The prevalence of myocarditis was 74.3% in ARVC, 56.7% in DCM, 54.4% in LVNC, 37.5% in RCM, and 30.9% in HCM. Myocarditis had a primary viral or secondary autoimmune nature and manifested with the onset or worsening of chronic heart failure (CHF) and arrhythmias. Treatment of myocarditis in cardiomyopathies has been shown to stabilise or improve patient condition and reduce the risk of adverse outcomes. Conclusions: In cardiomyopathies, the genetic basis and inflammation are components of a single continuum, which forms a complex phenotype. In genetic cardiomyopathies, myocarditis should be actively diagnosed and treated as it is an important therapeutic target. Full article
(This article belongs to the Section Genetic Diagnosis)
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<p>Graphical representation depicting the structure of the patients included in the study, taking into account the presence of mixed phenotypes.</p>
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<p>Results of morphological study of myocardium in different cardiomyopathies. (<b>a</b>,<b>b</b>) Myocardial changes in HCM in the form of bizarre shape of branching cardiomyocytes, small focal cardiosclerosis with neoangiogenesis, and lymphohistiocytic infiltrates in sclerosis foci; (<b>c</b>,<b>d</b>) myocarditis in HCM with productive capillarites and development of interstitial sclerosis: myocardium is divided by fibrous septa of unequal thickness into lobules, uneven hypertrophy of nuclei, vessels with swollen endothelium, and perivascular accumulations of lymphoid elements are noted, more than 14 in the field of view at high magnification; (<b>e</b>,<b>f</b>) picture of lymphohistiocytic infiltration in ARVC, pronounced total fibrous-fatty replacement of myocardium of LV, the area of preserved myocardium in some areas does not exceed 25%; (<b>g</b>,<b>h</b>) lymphohistiocytic infiltrates perivascularly and in the interstitium (<b>g</b>) in a patient with DCM within laminopathy, fatty tissue replacement of dead cardiomyocytes (<b>h</b>); (<b>i</b>,<b>j</b>) SARS-CoV-2-induced myocarditis in a patient with RCM caused by pathogenic or likely pathogenic variants in <span class="html-italic">MyBPC3</span> and <span class="html-italic">LZTR1</span> genes: marked lymphohistiocytic infiltration, areas of lipomatosis, dystrophic changes in cardiomyocytes; (<b>k</b>,<b>l</b>) Ab to SARS-CoV-2 nucleocapsid (<b>k</b>) and spike antigen (<b>l</b>). (<b>a</b>–<b>c</b>,<b>e</b>–<b>j</b>)—haematoxylin and eosin staining; (<b>d</b>)—Van Gieson picrofuchsin staining; (<b>k</b>,<b>l</b>)—immunohistochemical study; (<b>a</b>,<b>f</b>)—low magnification; (<b>b</b>–<b>e</b>,<b>g</b>–<b>l</b>)—high magnification.</p>
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<p>Titres of anti-cardiac antibodies in different cardiomyopathies, depending on the presence (M+) or absence (M−) of myocarditis; * - <span class="html-italic">p</span> &lt; 0.05.</p>
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<p>Kaplan–Meier curves for different genetic cardiomyopathies, depending on the presence or absence of myocarditis. Red colour—patients with a combination of cardiomyopathy and myocarditis, blue colour—patients with isolated cardiomyopathies.</p>
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<p>Spectrum of genes with pathogenic or likely pathogenic variants in different cardiomyopathies, depending on the presence (M+) or absence (M−) of myocarditis.</p>
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<p>Frequency of myocarditis in different causes of myocardial hypertrophy syndrome.</p>
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<p>Frequency of superimposed myocarditis, depending on the type of cardiomyopathy.</p>
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14 pages, 580 KiB  
Article
Seroprevalence of Toxoplasma gondii in White-Tailed Deer (Odocoileus virginianus) in New York State
by Emily D. Ledgerwood and Jason D. Luscier
Pathogens 2025, 14(1), 30; https://doi.org/10.3390/pathogens14010030 - 3 Jan 2025
Viewed by 310
Abstract
The parasitic protozoa, Toxoplasma gondii (T. gondii), is a model organism for one health because of its wide-ranging impacts on humans, wildlife, and domestic animals. Intermediate hosts, including white-tailed deer (Odocoileus virginianus), have been implicated in its maintenance. Prior [...] Read more.
The parasitic protozoa, Toxoplasma gondii (T. gondii), is a model organism for one health because of its wide-ranging impacts on humans, wildlife, and domestic animals. Intermediate hosts, including white-tailed deer (Odocoileus virginianus), have been implicated in its maintenance. Prior analysis of Toxoplasma gondii seroprevalence in New York State deer focused on rural areas; however, the high density of domestic cats (Felis catus) in urban areas has been implicated in its spread amongst deer. To address this, the seroprevalence of Toxoplasma gondii was assessed across two suburban and urban areas with known deer overabundance in Onondaga and Suffolk County. Here, domestic cats are the only likely definitive host. Between 2019 and 2023, serum from culled deer was collected, and Toxoplasma gondii seropositivity was determined using the modified agglutination test. Overall seroprevalence was 49.31% (n = 144) but was significantly higher in Onondaga (64%) compared to Suffolk County (36%), despite similarities between these two regions. Deer from Onondaga also had higher antibody titers. These data suggest that although urbanization may be a predictor of Toxoplasma gondii seropositivity in deer, there are additional contributing factors. Overall, this study emphasizes the need for continued surveillance in intermediate hosts and informs public health and wildlife management decisions aimed at limiting the impact of Toxoplasma gondii. Full article
(This article belongs to the Special Issue Advances in Animal Parasitic Diseases)
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<p><span class="html-italic">Toxoplasma gondii</span> seropositivity in white-tailed deer does not correlate with population density. Deer samples were obtained across five locations in Onondaga County (upper left inset) and one location in Suffolk County (lower right inset) and <span class="html-italic">T. gondii</span> seroprevalence was determined. This map was created using QGIS version 3.32.3-Lima [<a href="#B30-pathogens-14-00030" class="html-bibr">30</a>]. Human population densities of residents (res./km<sup>2</sup>) were computed based on the numbers of people within a 10 km radius of the geographic center of each municipality [<a href="#B29-pathogens-14-00030" class="html-bibr">29</a>].</p>
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18 pages, 5480 KiB  
Article
A Novel In Vitro Model of the Bone Marrow Microenvironment in Acute Myeloid Leukemia Identifies CD44 and Focal Adhesion Kinase as Therapeutic Targets to Reverse Cell Adhesion-Mediated Drug Resistance
by Eleni E. Ladikou, Kim Sharp, Fabio A. Simoes, John R. Jones, Thomas Burley, Lauren Stott, Aimilia Vareli, Emma Kennedy, Sophie Vause, Timothy Chevassut, Amarpreet Devi, Iona Ashworth, David M. Ross, Tanja Nicole Hartmann, Simon A. Mitchell, Chris J. Pepper, Giles Best and Andrea G. S. Pepper
Cancers 2025, 17(1), 135; https://doi.org/10.3390/cancers17010135 - 3 Jan 2025
Viewed by 288
Abstract
Background/Objectives: Acute myeloid leukemia (AML) is an aggressive neoplasm. Although most patients respond to induction therapy, they commonly relapse due to recurrent disease in the bone marrow microenvironment (BMME). So, the disruption of the BMME, releasing tumor cells into the peripheral circulation, has [...] Read more.
Background/Objectives: Acute myeloid leukemia (AML) is an aggressive neoplasm. Although most patients respond to induction therapy, they commonly relapse due to recurrent disease in the bone marrow microenvironment (BMME). So, the disruption of the BMME, releasing tumor cells into the peripheral circulation, has therapeutic potential. Methods: Using both primary donor AML cells and cell lines, we developed an in vitro co-culture model of the AML BMME. We used this model to identify the most effective agent(s) to block AML cell adherence and reverse adhesion-mediated treatment resistance. Results: We identified that anti-CD44 treatment significantly increased the efficacy of cytarabine. However, some AML cells remained adhered, and transcriptional analysis identified focal adhesion kinase (FAK) signaling as a contributing factor; the adhered cells showed elevated FAK phosphorylation that was reduced by the FAK inhibitor, defactinib. Importantly, we demonstrated that anti-CD44 and defactinib were highly synergistic at diminishing the adhesion of the most primitive CD34high AML cells in primary autologous co-cultures. Conclusions: Taken together, we identified anti-CD44 and defactinib as a promising therapeutic combination to release AML cells from the chemoprotective AML BMME. As anti-CD44 is already available as a recombinant humanized monoclonal antibody, the combination of this agent with defactinib could be rapidly tested in AML clinical trials. Full article
(This article belongs to the Special Issue Targeting the Tumor Microenvironment (Volume II))
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<p>The optimized BMAS. (<b>a</b>) The 10× magnification light microscopy images of co-culture. KG1a cells (bright round) attached to BMAS cells (darker and elongated). Images were captured using an Olympus CKX41 microscope, with a micropix camera and Tsview 7 version 7.1 software. (<b>b</b>) The number of non-adhered AML cells (mean ± SD) when co-cultured with ratio of 1:1:1 hFOB1.19/HS-5/HUVEC, KG1a cells (<span class="html-italic">n</span> = 3) and OCI-AML3 cells (<span class="html-italic">n</span> = 3) as a percentage of the number in monoculture. Significance determined using a one-way ANOVA, following the Shapiro–Wilk test for normality. (<b>c</b>) Percentage Annexin V-positive (apoptotic) adhered versus non-adhered OCI-AML3 (<span class="html-italic">n</span> = 3) and KG1a (<span class="html-italic">n</span> = 3) cells. Significance determined using paired <span class="html-italic">t</span>-test, following the Shapiro-Wilk test for normality. Significance determined using one-sample <span class="html-italic">t</span>-test, following the Shapiro-Wilk test for normality. **** <span class="html-italic">p</span> ≤ 0.0001, *** <span class="html-italic">p</span> ≤ 0.001 and ** <span class="html-italic">p</span> ≤ 0.01.</p>
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<p>BMAS-modeled CAM-DR and SFM-DR following 72-h of co-culture. Cytarabine dose response curves (72 h). (<b>a</b>) OCI-AML3 cells (<span class="html-italic">n</span> = 3) and (<b>b</b>) KG1a cells (<span class="html-italic">n</span> = 3) were treated with increasing doses of cytarabine for 72 h and viability measured using Annexin V staining and flow cytometry. Sigmoidal dose response curves were plotted (mean ± SD).</p>
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<p>Anti-CD44 treatment was the most effective in blocking AML cell adhesion in cell lines and primary cells. Incubation of AML cells with anti-CD44 antibody. (<b>a</b>) Compared to the untreated sample, the fold change (FC) in non-adhered AML cells (mean ± SD) when treated with increasing doses of anti-CD44 and co-cultured for 3 h on the BMAS in (<b>a</b>) OCI-AML3 and (<b>b</b>) KG1a. Significance determined using one-way ANOVA and Dunnett’s multiple-comparisons test for comparing every mean to a no-treatment control equal to 1. (<b>c</b>) A comparison between the best dose for each drug tested, showing anti-CD44 was the most effective (OCI-AML3 blue dots and KG1a red dots). Significance determined using Welch’s ANOVA with Dunnett’s multiple comparisons. (<b>d</b>) Compared to the untreated sample, the fold change (FC) in non-adhered primary AML cells (mean ± SD) when treated with 5 µg/mL of anti-CD44 in BM (<span class="html-italic">n</span> = 10) and PB (<span class="html-italic">n</span> = 15) samples. Primary AML cells were identified using a full AML panel and patient-specific phenotyping data provided by the diagnostic laboratory. A representative panel and gating strategy for primary AML cells can be found in <a href="#app1-cancers-17-00135" class="html-app">Supplementary Figure S3</a>. Significance determined using one-sample Wilcoxon, following the Shapiro–Wilk test for normality. Results are compared to a no-treatment control equal to 1. (<b>e</b>) Correlation of CD44 expression (median fluorescent intensity [MFI]) in BM-derived samples (<span class="html-italic">n</span> = 8) with PB WBC count on samples taken at the same time. Correlation was determined using Pearson’s correlation, with the 95% confidence interval shown as dotted lines. (<b>f</b>) Correlation of BM AML cell CD44 mRNA with the percentage of AML blast cells in the BM from BEATAML2 [<a href="#B32-cancers-17-00135" class="html-bibr">32</a>]. Correlation was determined using Pearson’s correlation with 95% confidence intervals. **** <span class="html-italic">p</span> ≤ 0.0001, *** <span class="html-italic">p</span> ≤ 0.001, ** <span class="html-italic">p</span> ≤ 0.01 and * <span class="html-italic">p</span> ≤ 0.05.</p>
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<p>The combination of anti-CD44 with cytarabine can overcome CAM-DR. AML cells were incubated with three different concentrations of cytarabine ± pre-treatment with 5 µg/mL anti-CD44 (<b>a</b>) For each cytarabine concentration (10 µM, 5 µM and 1 µM), the fold change (FC) in the number of Annexin V-positive AML cells (mean ± SD) in the presence of anti-CD44 is compared to its absence (the absence of anti-CD44 is normalized to 1): OCI-AML3 (<span class="html-italic">n</span> = 3) and KG1a cells (<span class="html-italic">n</span> = 3). Significance determined using one-way ANOVA and Dunnett’s multiple-comparisons test comparing every mean to a no-treatment control equal to 1 following the Shapiro–Wilk test for normality (<b>b</b>) Representative dot plot of Annexin V staining of non-adhered KG1a cells following treatment with 1 µM cytarabine alone (left) or 1 µM cytarabine with 5 µg/mL anti-CD44 (right). Although the proportion of apoptotic cells is similar in both, there are far more non-adhered KG1a cells in the presence of anti-CD44 (right) and, therefore, far more apoptotic KG1a cells. (<b>c</b>) Representative 10× magnification light microscopy images (scale bar represents 100 µm) of the co-culture following treatment with 5 µM cytarabine alone (left), 5 µg/mL anti-CD44 alone (middle) or both (right). Elongated darker cells are the BMAS, which adhered to the base of the well and were unaffected by chemotherapy and anti-CD44 treatment. Some persistently adhered AML cells (round with dark center) were observed following cytarabine treatment alone (left image). More bright, shiny AML cells are seen in the presence of anti-CD44 alone (middle image), but when cytarabine is added to anti-CD44, a marked reduction in the number of adhered AML cells was observed (right image). Images were captured using an Olympus CKX41 microscope, a micropix camera and Tsview 7 version 7.1 software. (<b>d</b>,<b>e</b>) For each cytarabine concentration (10 µM, 5 µM and 1 µM), the fold change (FC) in the number of Annexin V-positive AML cells (mean ± SD) in the presence of anti-CD44 is compared to its absence (the absence of anti-CD44 is normalized to 1) using (<b>d</b>) PB-derived samples (<span class="html-italic">n</span> = 10) and (<b>e</b>) BM-derived samples (<span class="html-italic">n</span> = 5). Significance was determined using the Kruskal–Wallis test and Dunnett’s multiple-comparisons test (<b>d</b>) and one-way ANOVA test and Dunnett’s multiple-comparisons test (<b>e</b>), following the Shapiro–Wilk test for normality. (<b>f</b>) Number of Annexin V-positive AML cells (in 50 µL) following treatment with 5 µM of cytarabine alone added to that in 5 µg/mL anti-CD44 alone in primary AML cells. The sum of their individual effects (red/blue column on left) is compared to their combined effect when cells were treated with both agents simultaneously (green column on right). Results for each individual patient are shown in <a href="#app1-cancers-17-00135" class="html-app">Supplementary Figure S4a</a>). Each sample represents a biological repeat (<span class="html-italic">n</span> = 15). Significance was determined using a paired <span class="html-italic">t</span>-test, following the Shapiro–Wilk test for normality. **** <span class="html-italic">p</span> ≤ 0.0001, *** <span class="html-italic">p</span> ≤ 0.001, ** <span class="html-italic">p</span> ≤ 0.01 and * <span class="html-italic">p</span> ≤ 0.05.</p>
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<p>Transcriptomic analysis identified the FAK signaling pathways as the top determinant of persistent adhesion following treatment with anti-CD44. (<b>a</b>) Unsupervised hierarchical clustered heatmap for each sample in the RNA sequencing dataset. Every row of the heatmap represents a single gene, every column represents a sample, and every cell displays normalized gene expression values. (<b>b</b>) Venn diagram summarizing the overlap between differentially expressed genes between adhered versus non-adhered AML cells after each cell line was analyzed separately. The left circle (blue) represents the genes differentially expressed in OCI-AML3-adhered cells compared non-adhered cells. The right circle (red) represents the genes differentially expressed in KG1a-adhered cells compared to non-adhered cells. (<b>c</b>) Volcano Plot displaying the log2-fold changes of each gene, calculated by performing a differential gene expression analysis. Every point in the plot represents a gene. Red points indicate significantly upregulated genes, and blue points indicate downregulated genes for OCI-AML3 (right; 486 upregulated and 18 downregulated) and KG1a (left; 364 upregulated and 7 downregulated) cells. The thresholds used for this analysis were log2FC ≥1.5 and an adjusted <span class="html-italic">p</span> ≤ 0.05. (<b>d</b>) Pathway enrichment analysis (KEGG pathways) for OCI-AML3 (right) and KG1a (left) cells. The x-axis indicates the −log10 (<span class="html-italic">p</span>-value) for each term. Significant terms are highlighted in bold. (<b>e</b>) MFI of pFAK in monoculture, adhered and non-adhered KG1a cells in the presence (triangle points) and absence (circle points) of 5 µg/mL anti-CD44. (<b>f</b>) pFAK MFI in adhered (orange triangles and circles) and non-adhered (purple triangles and circles) KG1a cells in the presence and absence of 5 µM of defactinib.</p>
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<p>Defactinib in combination with anti-CD44 is additive/synergistic in preventing AML cell adhesion. (<b>a</b>) FC in non-adhered KG1a AML cells (mean ± SD) when treated with increasing doses of anti-CD44 alone, increasing doses of defactinib alone or in combination. Synergy plot (right) was generated using SynergyFinder software (version 3.0, <a href="https://synergyfinder.fimm.fi" target="_blank">https://synergyfinder.fimm.fi</a> (accessed on 15 February 2023)), showing an additive mean Bliss score of 1.627 (&gt;1 = additive) and maximum of 4.39 (5 µg/mL + 5 µM). Results are compared to the no-treatment control, which is equal to 1. (<b>b</b>) Representative scatter plots of no drug, anti-CD44, defactinib and the combination of both, showing the proportions of total and CD34<sup>+</sup> non-adhered primary AML cells after 2 min of acquisition on a Cytoflex S flow cytometer. This shows substantially more viable non-adhered CD34<sup>+</sup> and CD34<sup>−</sup> AML cells in the presence of both anti-CD44 and defactinib than no drug or either alone. (<b>c</b>) Individual FC (compared to no drug) in viable non-adhered primary AML cell numbers (mean ± SD) when treated with increasing doses of anti-CD44, defactinib or both and co-cultured for 3 h with a confluent layer of autologous stromal cells. Different concentrations of anti-CD44 alone and defactinib alone versus the combination of both were determined using a one-way ANOVA, and the results are tabulated in <a href="#app1-cancers-17-00135" class="html-app">Supplementary Table S5</a>; all comparisons were significant. (<b>d</b>) Combined FC in non-adhered primary AML cells (<span class="html-italic">n</span> = 3, mean ± SD) when treated with increasing doses of anti-CD44 alone, increasing doses of defactinib alone or in combination. A representative synergy contour plot for patient AML13 (right) was generated using SynergyFinder and shows a mean Bliss score of 8.12 (&gt;1 = additive) and a synergistic maximum of 18.74 (2.5 µg/mL + 2.5 µM; &gt;10 = synergistic).</p>
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17 pages, 2733 KiB  
Article
The Structural, Biophysical, and Antigenic Characterization of the Goose Parvovirus Capsid
by Korosh Jabbari, Mario Mietzsch, Jane Hsi, Paul Chipman, Jianming Qiu and Robert McKenna
Microorganisms 2025, 13(1), 80; https://doi.org/10.3390/microorganisms13010080 - 3 Jan 2025
Viewed by 353
Abstract
Goose parvovirus (GPV) is an etiological agent of Derzsy’s disease, afflicting geese and Muscovy ducks worldwide. Its high mortality rate among goslings and ducklings causes large losses to the waterfowl industry. Toward molecular and structural characterization, virus-like particles (VLPs) of GPV were produced, [...] Read more.
Goose parvovirus (GPV) is an etiological agent of Derzsy’s disease, afflicting geese and Muscovy ducks worldwide. Its high mortality rate among goslings and ducklings causes large losses to the waterfowl industry. Toward molecular and structural characterization, virus-like particles (VLPs) of GPV were produced, and the capsid structure was determined by cryogenic electron microscopy (cryo-EM) at a resolution of 2.4 Å. The capsid exhibited structural features conserved among parvoviruses, including surface two-fold depressions, three-fold protrusions, and five-fold channels. A structural comparison of the GPV viral protein (VP) structure with other adeno-associated viruses (AAVs), including human AAV2, AAV5, and quail AAV (QAAV), revealed unique conformations of several surface-accessible variable regions (VRs). Furthermore, the GPV capsid was found to be thermally stable at physiological pH, but less so under lower pH conditions. As a member of the genus Dependoparvovirus, GPV could also be bound by cross-reactive anti-AAV capsid antibodies that bind to the five-fold region of the viruses, as shown by native immuno-dot blot analysis. Finally, the GPV VP structure was compared to those of other bird dependoparvoviruses, which revealed that VR-III may be important for GPV and Muscovy duck parvovirus (MDPV) infection. Full article
(This article belongs to the Special Issue Advances in Parvovirus Infection of Pets and Waterfowl)
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<p>Determination of the GPV capsid structure. (<b>a</b>) SDS-PAGE of the GPV VLPs exhibiting the expected molecular weight of ~60 kDa and a cryo-EM micrograph of the same sample, displaying intact, empty capsids. (<b>b</b>) The 3D-reconstructed GPV capsid structure is shown with a final resolution of 2.43 Å. The approximate locations of surface features associated with the 2-, 3-, and 5-fold axes are indicated. The maps are colored according to the radial distance from the capsid center, as indicated by the scale bar. (<b>c</b>) A piece of the modeled βG-strand (aa440–aa444) of the GPV VP is shown inside the GPV electron density map. The model is displayed in a stick representation and colored according to atom type: C = yellow; O = red; N = blue.</p>
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<p>The GPV VP structure. The superposition of the experimentally determined (green) and AlphaFold2.3 (yellow)- and AlphaFold3 (blue)-predicted VP structures are shown as ribbon diagrams. The positions of VRs I to IX, the HI loop, β-strands (βA-βI), α-helix A, the N- and C-termini, and the icosahedral 2-, 3-, and 5-fold axes are indicated.</p>
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<p>Sequence and structural comparisons of GPV (green), QAAV (turquoise), AAV2 (pink), and AAV5 (orange) monomers. (<b>a</b>) Alignment of the monomers of GPV, QAAV, AAV2, and AAV5. VRs containing significant structural variation between the monomers are boxed (right). (<b>b</b>) Table depicting the VP amino acid sequence and structural identities of GPV, QAAV, AAV2, and AAV5.</p>
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<p>Native immuno-dot blot analysis of mAbs reconstituted from infant patients with SMA treated with Zolgensma, an AAV9 vector gene therapeutic. Decreasing amounts of wtAAV9 capsids, VLPs of GPV, or wtAAV5 capsids are loaded onto the membranes from left to right in each row of blots (upper-leftmost panel). The dot-blots from the mAb incubations are shown and labeled with the conserved morphological region that the mAbs bind to. The dot blot from the B1 antibody, which binds to a linear epitope buried in the interior of the capsid, serves as a loading control for the capsids (denatured, lower-leftmost panel) [<a href="#B67-microorganisms-13-00080" class="html-bibr">67</a>].</p>
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<p>DSF data characterizing the thermal stability of the GPV capsid in different pH environments. (<b>a</b>) Raw fluorescence data curves from DSF of the VLPs of GPV at pHs of 1–8. Each color represents a discrete pH value. (<b>b</b>) Scatterplot of the measured melting points of the VLPs of GPV against pH. The experiments were conducted in triplicate.</p>
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<p>Comparisons of the VP amino acid sequences and structures of different bird-based dependoparvoviruses as well as AAV2 and AAV5. (<b>a</b>) Phylogenetic analysis of the VP amino acid sequences. Sequence identities compared to GPV are given for all viruses as a percentage. (<b>b</b>) Structural alignment of the predicted AlphaFold2.3 models of seven bird-based dependoparvoviruses with the cryo-EM GPV model. All the VRs, as well as the HI loop, are labeled.</p>
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7 pages, 194 KiB  
Case Report
Successful Switch to Obinutuzumab in a Rituximab-Intolerant Child with Difficult-to-Treat Idiopathic Nephrotic Syndrome
by Magdalena Drozynska-Duklas, Anna Kranz, Ilona Zagozdzon, Irena Balasz-Chmielewska, Ilona Chudzik and Aleksandra Zurowska
J. Clin. Med. 2025, 14(1), 239; https://doi.org/10.3390/jcm14010239 - 3 Jan 2025
Viewed by 247
Abstract
Background: Idiopathic nephrotic syndrome (INS) is the most common cause of nephrotic syndrome in children. A hallmark of the disease is the rapid remission of proteinuria following a high dose of steroids. Recurrent disease or steroid dependence are common, leading to a [...] Read more.
Background: Idiopathic nephrotic syndrome (INS) is the most common cause of nephrotic syndrome in children. A hallmark of the disease is the rapid remission of proteinuria following a high dose of steroids. Recurrent disease or steroid dependence are common, leading to a high steroid burden and the introduction of steroid sparing therapy. Anti-CD20 antibodies have been increasingly used with excellent results in complicated INS. Nevertheless, their use can be limited by the occurrence of infusion-related reactions (IRRs). Methods: This report discusses further treatment options for children who are intolerant to RTX and presents the first report of a successful switch to obinutuzumab (OBI) for a child with difficult-to-treat steroid-dependent nephrotic syndrome (SDNS) and RTX intolerance who was unresponsive to a desensitization protocol. Results: A 12-year-old boy with SDNS since the age of 2, was treated with steroids, cyclophosphamide and cyclosporine A (CsA). Because of the prolonged use of calcineurin inhibitors, a course of rituximab (RTX) was planned. Unfortunately, during first infusion, the boy presented with IRR. A desensitization protocol following the first unsuccessful infusion also failed. Facing the risks of long-term cyclosporine therapy, a decision was made to switch to another type of anti-CD20 antibody. Obinutuzumab infusion with a modified premedication scheme was uneventful. Conclusions: Switching therapy to obinutuzumab may be considered an option in nephrotic children who are intolerant to RTX when alternative therapies have been exhausted. The addition of montelukast to premedication and employment of desensitization protocols may decrease the risk of infusion-related reactions to anti-CD20 agents. Full article
(This article belongs to the Section Clinical Pediatrics)
17 pages, 3803 KiB  
Article
Interstitial Lung Disease Associated with Anti-Ku Antibodies: A Case Series of 19 Patients
by Laure Petitgrand, Kaïs Ahmad, Delphine Gamondès, Rémi Diesler, Nicole Fabien, Laure Gallay, Romain Fort, Julie Traclet, François Lestelle, Roland Chapurlat, Cyrille B. Confavreux, Stéphane Durupt, Ségolène Turquier, Salim Aymeric Si-Mohamed, Frédéric Coutant and Vincent Cottin
J. Clin. Med. 2025, 14(1), 247; https://doi.org/10.3390/jcm14010247 - 3 Jan 2025
Viewed by 260
Abstract
Background: Antibodies against Ku have been described in patients with various connective tissue diseases. The objective of this study was to describe the clinical, functional, and imaging characteristics of interstitial lung disease in patients with anti-Ku antibodies. Methods: This single-center, retrospective observational [...] Read more.
Background: Antibodies against Ku have been described in patients with various connective tissue diseases. The objective of this study was to describe the clinical, functional, and imaging characteristics of interstitial lung disease in patients with anti-Ku antibodies. Methods: This single-center, retrospective observational study was conducted at a tertiary referral institution. Patients with positive anti-Ku antibodies and interstitial lung disease identified between 2007 and 2022 were included. Clinical, immunological, functional, and imaging data were systematically reviewed. Results: Nineteen patients (ten females) with a mean age of 59 ± 12.6 years were included. The most frequent associated diagnosis was systemic sclerosis (42%), followed by rheumatoid arthritis (26%), Sjögren syndrome, undifferentiated connective tissue disease, and overlap between systemic sclerosis and idiopathic inflammatory myopathy (scleromyositis). Imaging revealed frequent septal and intralobular reticulations and ground-glass opacities, with nonspecific interstitial pneumonia as the predominant pattern (53%). The mean forced vital capacity was 82% ± 26 of the predicted value, and the mean diffusing capacity for carbon monoxide was 55% ± 21. Over the first year of follow-up, the mean annual forced vital capacity decline was 140 mL/year (range: 0–1610 mL/year). The overall survival rate was 82% at 5 years and 67% at 10 years. Conclusions: Most patients with interstitial lung disease and anti-Ku antibodies presented with dyspnea, a mild-to-moderate restrictive ventilatory pattern, and reduced diffusing capacity for carbon monoxide. The CT pattern was heterogeneous but was consistent with nonspecific interstitial pneumonia in half of the patients. Full article
(This article belongs to the Section Pulmonology)
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<p>Flowchart of the study. CT: computed tomographyl; ILD: interstitial lung disease.</p>
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<p>Characteristic speckled nuclear fluorescence pattern of anti-Ku antibodies observed on HEp-2 cells by indirect immunofluorescence. The white arrow highlights the nucleus of a cell in metaphase with fluorescence around the chromatin and negative mitoses.</p>
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<p>Computed tomography of a male patient with anti-Ku antibodies, demonstrating a pattern of fibrotic nonspecific interstitial pneumonia. (<b>A</b>) Axial view of lower part of the lungs, demonstrating diffuse distribution of ground-glass opacities, reticulation, bronchiectasis, and bronchiolectasis. (<b>B</b>) Sagittal view showing apicobasal distribution. (<b>C</b>) Coronal view, with minimal intensity projection of 13 mm. (<b>D</b>) Sagittal view, with minimal intensity projection of 13 mm.</p>
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<p>Computed tomography of a male patient with anti-Ku antibodies, demonstrating a pattern of fibrotic nonspecific interstitial pneumonia, apicobasal distribution of ground-glass opacities and reticulation with subpleural sparing, bronchiectasis, and bronchiolectasis, associated with paraseptal emphysema. (<b>A</b>) Upper part of the lungs, axial view. (<b>B</b>) Middle part of the lungs, axial view. (<b>C</b>) Lower part of the lungs, axial view. (<b>D</b>) Sagittal view, with a minimal intensity projection of 5 mm.</p>
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<p>Kaplan–Meier estimates of overall survival. The solid line represents the estimate of overall survival. The dotted lines represent the 95% confidence interval.</p>
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19 pages, 1864 KiB  
Article
An FPGA-Based SiNW-FET Biosensing System for Real-Time Viral Detection: Hardware Amplification and 1D CNN for Adaptive Noise Reduction
by Ahmed Hadded, Mossaad Ben Ayed and Shaya A. Alshaya
Sensors 2025, 25(1), 236; https://doi.org/10.3390/s25010236 - 3 Jan 2025
Viewed by 268
Abstract
Impedance-based biosensing has emerged as a critical technology for high-sensitivity biomolecular detection, yet traditional approaches often rely on bulky, costly impedance analyzers, limiting their portability and usability in point-of-care applications. Addressing these limitations, this paper proposes an advanced biosensing system integrating a Silicon [...] Read more.
Impedance-based biosensing has emerged as a critical technology for high-sensitivity biomolecular detection, yet traditional approaches often rely on bulky, costly impedance analyzers, limiting their portability and usability in point-of-care applications. Addressing these limitations, this paper proposes an advanced biosensing system integrating a Silicon Nanowire Field-Effect Transistor (SiNW-FET) biosensor with a high-gain amplification circuit and a 1D Convolutional Neural Network (CNN) implemented on FPGA hardware. This attempt combines SiNW-FET biosensing technology with FPGA-implemented deep learning noise reduction, creating a compact system capable of real-time viral detection with minimal computational latency. The integration of a 1D CNN model on FPGA hardware for adaptive, non-linear noise filtering sets this design apart from conventional filtering approaches by achieving high accuracy and low power consumption in a portable format. This integration of SiNW-FET with FPGA-based CNN noise reduction offers a unique approach, as prior noise reduction techniques for biosensors typically rely on linear filtering or digital smoothing, which lack adaptive capabilities for complex, non-linear noise patterns. By introducing the 1D CNN on FPGA, this architecture enables real-time, high-fidelity noise reduction, preserving critical signal characteristics without compromising processing speed. Notably, the findings presented in this work are based exclusively on comprehensive simulations using COMSOL and MATLAB, as no physical prototypes or biomarker detection experiments were conducted. The SiNW-FET biosensor, functionalized with antibodies specific to viral antigens, detects impedance shifts caused by antibody–antigen interactions, providing a highly sensitive platform for viral detection. A high-gain folded-cascade amplifier enhances the Signal-to-Noise Ratio (SNR) to approximately 70 dB, verified through COMSOL and MATLAB simulations. Additionally, a 1D CNN model is employed for adaptive noise reduction, filtering out non-linear noise patterns and achieving an approximate 75% noise reduction across a broad frequency range. The CNN model, implemented on an Altera DE2 FPGA, enables high-throughput, low-latency signal processing, making the system viable for real-time applications. Performance evaluations confirmed the proposed system’s capability to enhance the SNR significantly while maintaining a compact and energy-efficient design suitable for portable diagnostics. This integrated architecture thus provides a powerful solution for high-precision, real-time viral detection, and continuous health monitoring, advancing the role of biosensors in accessible point-of-care diagnostics. Full article
(This article belongs to the Special Issue Advanced Sensor Technologies for Biomedical-Information Processing)
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<p>Complete sensor architecture.</p>
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<p>SNR distributions before and after noise reduction.</p>
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<p>The proposed 1D CNN architecture.</p>
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<p>Comparative SNR improvement across noise reduction techniques for SiNW-FET biosensor signals.</p>
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<p>FPGA-based 1D CNN accelerator design.</p>
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23 pages, 2695 KiB  
Review
Lipidic and Inorganic Nanoparticles for Targeted Glioblastoma Multiforme Therapy: Advances and Strategies
by Ewelina Musielak and Violetta Krajka-Kuźniak
Micro 2025, 5(1), 2; https://doi.org/10.3390/micro5010002 - 3 Jan 2025
Viewed by 355
Abstract
Due to their biocompatibility, nontoxicity, and surface conjugation properties, nanomaterials are effective nanocarriers capable of encapsulating chemotherapeutic drugs and facilitating targeted delivery across the blood–brain barrier (BBB). Although research on nanoparticles for brain cancer treatment is still in its early stages, these systems [...] Read more.
Due to their biocompatibility, nontoxicity, and surface conjugation properties, nanomaterials are effective nanocarriers capable of encapsulating chemotherapeutic drugs and facilitating targeted delivery across the blood–brain barrier (BBB). Although research on nanoparticles for brain cancer treatment is still in its early stages, these systems hold great potential to revolutionize drug delivery. Glioblastoma multiforme (GBM) is one of the most common and lethal brain tumors, and its heterogeneous and aggressive nature complicates current treatments, which primarily rely on surgery. One of the significant obstacles to effective treatment is the poor penetration of drugs across the BBB. Moreover, GBM is often referred to as a “cold” tumor, characterized by an immunosuppressive tumor microenvironment (TME) and minimal immune cell infiltration, which limits the effectiveness of immunotherapies. Therefore, developing novel, more effective treatments is critical to improving the survival rate of GBM patients. Current strategies for enhancing treatment outcomes focus on the controlled, targeted delivery of chemotherapeutic agents to GBM cells across the BBB using nanoparticles. These therapies must be designed to engage specialized transport systems, allowing for efficient BBB penetration, improved therapeutic efficacy, and reduced systemic toxicity and drug degradation. Lipid and inorganic nanoparticles can enhance brain delivery while minimizing side effects. These formulations may include epitopes—small antigen fragments that bind directly to free antibodies, B cell receptors, or T cell receptors—that interact with transport systems and enable BBB crossing, thereby boosting therapeutic efficacy. Lipid-based nanoparticles (LNPs), such as liposomes, niosomes, solid lipid nanoparticles (SLNs), and nanostructured lipid carriers (NLCs), are among the most promising delivery systems due to their unique properties, including their size, surface modification capabilities, and proven biosafety. Additionally, inorganic nanoparticles such as gold nanoparticles, mesoporous silica, superparamagnetic iron oxide nanoparticles, and dendrimers offer promising alternatives. Inorganic nanoparticles (INPs) can be easily engineered, and their surfaces can be modified with various elements or biological ligands to enhance BBB penetration, targeted delivery, and biocompatibility. Strategies such as surface engineering and functionalization have been employed to ensure biocompatibility and reduce cytotoxicity, making these nanoparticles safer for clinical applications. The use of INPs in GBM treatment has shown promise in improving the efficacy of traditional therapies like chemotherapy, radiotherapy, and gene therapy, as well as advancing newer treatment strategies, including immunotherapy, photothermal and photodynamic therapies, and magnetic hyperthermia. This article reviews the latest research on lipid and inorganic nanoparticles in treating GBM, focusing on active and passive targeting approaches. Full article
(This article belongs to the Section Microscale Biology and Medicines)
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<p>Diagram of the structure of the human brain [<a href="#B9-micro-05-00002" class="html-bibr">9</a>].</p>
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32 pages, 676 KiB  
Review
Affordable mRNA Novel Proteins, Recombinant Protein Conversions, and Biosimilars—Advice to Developers and Regulatory Agencies
by Sarfaraz K. Niazi
Biomedicines 2025, 13(1), 97; https://doi.org/10.3390/biomedicines13010097 - 3 Jan 2025
Viewed by 363
Abstract
mRNA technology can replace the expensive recombinant technology for every type of protein, making biological drugs more affordable. It can also expedite the entry of new biological drugs, and copies of approved mRNA products can be treated as generic or biosimilar products due [...] Read more.
mRNA technology can replace the expensive recombinant technology for every type of protein, making biological drugs more affordable. It can also expedite the entry of new biological drugs, and copies of approved mRNA products can be treated as generic or biosimilar products due to their chemical nature. The introduction of hundreds of new protein drugs have been blocked due to the high cost of recombinant development. The low CAPEX and OPEX associated with mRNA technology bring it within the reach of developing countries that are currently deprived of life-saving biological drugs. In this paper, we advise developers to introduce novel proteins and switch recombinant manufacturing to mRNA delivery, and we further advise regulatory authorities to allow for the approval of copies of mRNA products with less testing. We anticipate that mRNA technology will make protein drugs, such as natural and engineered proteins, monoclonal antibodies, and vaccines, accessible to billions of patients worldwide. Full article
(This article belongs to the Section Drug Discovery, Development and Delivery)
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<p>mRNA Structure (Shutterstock Image).</p>
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12 pages, 274 KiB  
Communication
Molecular and Serological Screening Support the Lack of Coxiella burnetii Circulation in Wild Birds of Portugal
by Filipa Loureiro, João R. Mesquita, Luís Cardoso, Cristina Pintado, Sara Gomes-Gonçalves, Ana C. Matos, Vanessa Soeiro, Andreia Gonçalves, Filipe Silva, Manuela Matos and Ana Cláudia Coelho
Birds 2025, 6(1), 3; https://doi.org/10.3390/birds6010003 - 3 Jan 2025
Viewed by 290
Abstract
Coxiella burnetii is a highly infectious zoonotic pathogenic bacterium that has a major economic impact in the livestock industry throughout the world and causes unpredictable outbreaks in humans worldwide. Although it is known that birds are potential reservoirs of C. burnetii, their [...] Read more.
Coxiella burnetii is a highly infectious zoonotic pathogenic bacterium that has a major economic impact in the livestock industry throughout the world and causes unpredictable outbreaks in humans worldwide. Although it is known that birds are potential reservoirs of C. burnetii, their role in the epidemiological cycle of the pathogen has not been fully verified. Due to its non-specific symptoms and clinical signs, it is certainly an underdiagnosed disease. The objective of this study was to obtain more information on C. burnetii prevalence in wild birds in Portugal. Blood, plasma, and other tissue samples were obtained from wild birds admitted at wildlife rehabilitation centres in Portugal in the scope of passive surveillance. Antibodies specific to C. burnetii were screened using a commercial enzyme-linked immunosorbent assay according to the manufacturer’s instructions. Evidence of C. burnetii infection was sought based on the detection of bacterial DNA. No positive results were found, either in terms of antibodies to C. burnetii or molecular biology. These serological findings do not indicate the endemic circulation of C. burnetii in wild birds, which can be considered relevant information. However, a more complete and serialized approach over time is necessary to be able to make real inferences about the endemicity of the pathogen in the country and its dispersion among wild avian populations. qPCR results were also negative, a finding suggesting that this host population may not play a significant role in the transmission dynamics of C. burnetii. Given the importance of wild bird species as natural reservoirs of this zoonotic bacterium, we consider these data useful for multidisciplinary work in the prevention and control of Q fever, following a One Health approach. Full article
13 pages, 1335 KiB  
Article
Clinical Profiles, Survival, and Lung Function Outcomes in ANCA-Associated Interstitial Lung Disease: An Observational Study
by Cristina Valero-Martínez, Claudia Valenzuela, Juan Pablo Baldivieso Achá, Elisa Martínez-Besteiro, Patricia Quiroga-Colina, Arantzazu Alfranca, Esther F. Vicente-Rabaneda, Susana Hernández Muñiz, Santos Castañeda and Rosario García-Vicuña
J. Clin. Med. 2025, 14(1), 229; https://doi.org/10.3390/jcm14010229 - 3 Jan 2025
Viewed by 222
Abstract
Background/Objectives: Anti-neutrophil cytoplasmic antibodies (ANCAs) have been found in interstitial lung disease (ILD) in recent years, although its impact on ILD prognosis is less known. To date, ANCAs are not included in the interstitial pneumonia with autoimmune features (IPAF) definition criteria. Therefore, [...] Read more.
Background/Objectives: Anti-neutrophil cytoplasmic antibodies (ANCAs) have been found in interstitial lung disease (ILD) in recent years, although its impact on ILD prognosis is less known. To date, ANCAs are not included in the interstitial pneumonia with autoimmune features (IPAF) definition criteria. Therefore, ANCA-ILD, in the absence of known ANCA-associated vasculitis (AAV), could be underdiagnosed. Our aim was to analyze the clinical profile and prognosis of ANCA-ILD patients. Methods: Patients diagnosed with ILD and positive ANCA were enrolled in a retrospective, monocentric cohort study. Lung function outcomes and mortality were assessed according to clinical, serological, radiological, and treatment characteristics. Survival was analyzed using Kaplan–Meier curves and Cox regression models. Results: A total of 23 patients were included, mostly women, with a median time from ILD diagnosis of 36 (24–68) months and a predominant anti-MPO pattern (56.5%). Nearly half of the patients had AAV, mostly microscopic polyangiitis (MPA). The presence of AAV was significantly associated with anti-MPO antibodies and an NSIP radiographic pattern. Overall, the fibrotic pattern (either UIP or fibrotic NSIP) was the most common (73.9%), mainly UIP (51.2%). However, it appeared less frequently in the AAV-ILD group. During follow-up, lung function impairment or radiological progression was observed in 65.2% of patients. Cumulative mortality incidence was high (43.4%), largely due to ILD itself (80%). A UIP pattern was associated with a higher and earlier mortality (HR 34.4 [1.36–132]), while the use of immunosuppressants showed a trend towards lower ILD-related death. Conclusions: In our cohort, ANCA-ILD patients mostly presented with fibrotic patterns, with AAV in almost half of the cases and a high and early mortality rate, which suggests the need to assess ANCA in all ILD patients. Full article
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<p>Inspiratory axial HRCT images (<b>A</b>–<b>C</b>) in a 65-year-old woman diagnosed with isolated ANCA-ILD and positive C-ANCA. Pictures show reticulation (arrows), traction bronchiectasis (arrowhead), and ground glass opacities (asterisks), with no craniocaudal gradient. Bilateral mosaic pattern (geographic regions of decreased lung density) can also be detected (circles). Expiratory CT (<b>D</b>) confirms the presence of air trapping, and the mosaic pattern is highlighted compared to C. Findings suggest a non-UIP fibrotic interstitial lung disease.</p>
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<p>Axial (<b>A</b>) and coronal (<b>B</b>) high-resolution computed tomography images showing extensive fibrotic interstitial lung disease in a 70-year-old woman, diagnosed with isolated ANCA-ILD and anti-MPO positivity. Note the basilar predominance of honeycombing (arrows), traction bronchiectasis (arrowheads), and reticulation (asterisk); all findings are consistent with the usual interstitial pneumonia (UIP) pattern.</p>
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<p>Overall and stratified survival in the population with ILD and positive ANCA. (<b>A</b>) Kaplan–Meier survival curves for isolated ANCA-ILD or AAV_ILD based on the cumulative probability of survival. (<b>B</b>) Forest plot of the regression Cox analysis of the risk factors associated with premature mortality. Abbreviations: ANCA: anti-neutrophil cytoplasmic antibody; AAV: ANCA-associated vasculitis; Anti-MPO: anti-myeloperoxidase antibody; CI: confidence interval; HR: hazard ratio. ILD: interstitial lung disease.</p>
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18 pages, 3678 KiB  
Article
Development of a Novel Electrochemical Immunosensor for Rapid and Sensitive Detection of Sesame Allergens Ses i 4 and Ses i 5
by Huimei Li, Tian’ge Pan, Shudong He, Hanju Sun, Xiaodong Cao and Yongkang Ye
Foods 2025, 14(1), 115; https://doi.org/10.3390/foods14010115 - 3 Jan 2025
Viewed by 377
Abstract
Due to their lipophilicity and low content, the major sesame oleosin allergens, Ses i 4 and Ses i 5, are challenging to identify using conventional techniques. Then, a novel unlabeled electrochemical immunosensor was developed to detect the potential allergic activity of sesame oleosins. [...] Read more.
Due to their lipophilicity and low content, the major sesame oleosin allergens, Ses i 4 and Ses i 5, are challenging to identify using conventional techniques. Then, a novel unlabeled electrochemical immunosensor was developed to detect the potential allergic activity of sesame oleosins. The voltammetric immunosensor was constructed using a composite of gold nanoparticles (AuNPs), polyethyleneimine (PEI), and multi-walled carbon nanotubes (MWCNTs), which was synthesized in a one-pot process and modified onto a glass carbon electrode to enhance the catalytic current of the oxygen reduction reaction. The oleosin antibody was then directed and immobilized onto the surface of the electrode, which had been modified with streptavidin (SPA), through the fragment crystallizable (Fc) region of the antibody. Under optimized conditions, the immunosensor exhibited a linear response within a detection range of 50 to 800 ng/L, with detection limits of 0.616 ng/L for Ses i 4 and 0.307 ng/L for Ses i 5, respectively. The immunosensor demonstrated excellent selectivity and stability, making it suitable for the quantification of sesame oleosins. The comparative analysis of various detection methods for sesame allergens was conducted, revealing that the immunosensor achieved a wide detection range and low limit of detection (LOD). Compared to traditional enzyme-linked immunosorbent assay (ELISA), the immunosensor successfully quantified the allergenicity potential of Ses i 4 and Ses i 5 in roasted sesame seeds at temperatures of 120 °C, 150 °C, and 180 °C. This innovative method offers a new perspective for the rapid quantification of sesame oleosins in foods and real-time monitoring of allergic potential, providing significant advancements in the field of food allergy detection. Full article
(This article belongs to the Special Issue Food Allergen Detection, Identification and Risk Assessment)
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<p>Schematic illustration for (<b>A</b>) synthesis of AuNPs–MWCNTs–PEI nanocomposite, (<b>B</b>) fabrication steps of the immunosensor for the determination of Ses i 4 or Ses i 5.</p>
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<p>(<b>A</b>) Photos of MWCNTs (<b>a</b>), PEI–MWCNTs (<b>b</b>), and AuNPs–PEI–MWCNTs (<b>c</b>), dispersed in distilled water with the concentration of 2 mg/mL. (<b>B</b>) UV–Vis spectrum of PEI, AuNPs–PEI, MWCNTs, and AuNPs–PEI–MWCNTs. (<b>C</b>,<b>D</b>) FE-TEM images of MWCNTs and AuNPs–PEI–MWCNTs.</p>
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<p>CV characterization of electrodes modified with different materials (GCE, MWCNTs–GCE, and AuNPs–PEI–MWCNTs–GCE).</p>
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<p>CV characterization of immunosensor for sesame oleosins (<b>A</b>) Ses i 4 and (<b>B</b>) Ses i 5 at different assembly phases of AuNPs–PEI–MWCNTs (a), SPA–AuNPs–PEI–MWCNTs (b), Ab–SPA–AuNPs–PEI–MWCNTs (c), BSA–Ab–SPA–AuNPs–PEI–MWCNTs (d), and Ses i 4 (Ses i 5)–BSA–Ab–SPA–AuNPs–PEI–MWCNTs (e).</p>
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<p>Optimization of detecting parameters for Ses i 4. Effects of (<b>A</b>) [Fe(CN)<sub>6</sub>]<sup>3−/4−</sup> solutions at pH (5.8, 6.6, 7.4, 8.2, and 9.0 in 5 mM, 0.1 M KCl), (<b>B</b>) AuNPs–PEI–MWCNTs concentrations (1.0, 1.5, 2.0, 2.5, and 3.0 mg/mL), (<b>C</b>) incubation temperature for Ab (4, 18, 25, 37, and 45 °C), (<b>D</b>) Ab concentrations (0.01, 0.05, 0.1, 0.15, and 0.2 mg/mL), and (<b>E</b>) incubation time (10, 20, 30, 60, and 90 min) for Ses i 4 on the LSV peak current change (Δ<span class="html-italic">I</span>). Error bars represent standard deviation, <span class="html-italic">n</span> = 3.</p>
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<p>Optimization of detecting parameters for Ses i 5. Effects of (<b>A</b>) [Fe(CN)<sub>6</sub>]<sup>3−/4−</sup> solutions at pH (5.8, 6.6, 7.4, 8.2, and 9.0 in 5 mM, 0.1 M KCl), (<b>B</b>) AuNPs–PEI–MWCNTs concentrations (1.0, 1.5, 2.0, 2.5, and 3.0 mg/mL), (<b>C</b>) incubation temperature for Ab (4, 18, 25, 37, and 45 °C), (<b>D</b>) Ab concentrations (0.01, 0.05, 0.1, 0.15, and 0.2 mg/mL), and (<b>E</b>) incubation time (10, 20, 30, 60, and 90 min) for Ses i 4 on the LSV peak current change (Δ<span class="html-italic">I</span>). Error bars represent standard deviation, <span class="html-italic">n</span> = 3.</p>
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<p>Performance analysis of immunosensor for Ses i 4. (<b>A</b>) LSV responses for Ses i 4 standard with the concentrations of 0, 50, 100, 200, 400, and 800 ng/L, in 5 mM [Fe(CN)<sub>6</sub>]<sup>3−/4−</sup> solutions at scanning rate of 0.1 V/s, (<b>B</b>) and corresponding calibration curve (lgC vs. Δ<span class="html-italic">I</span>) of immunosensor recorded for 50–800 ng/L Ses i 4; the inset shows the curve of the currents against the Ses i 4 concentrations, error bars represent standard deviation, <span class="html-italic">n</span> = 3.</p>
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<p>Performance analysis of immunosensor for Ses i 5. (<b>A</b>) LSV responses for Ses i 5 standard with the concentrations of 0, 50, 100, 200, 400, and 800 ng/L, in 5 mM [Fe(CN)<sub>6</sub>]<sup>3−/4−</sup> solutions at scanning rate of 0.1 V/s, (<b>B</b>) and corresponding calibration curve (lgC vs. Δ<span class="html-italic">I</span>) of immunosensor recorded for 50–800 ng/L Ses i 5; the inset shows the curve of the currents against the Ses i 5 concentrations, error bars represent standard deviation, <span class="html-italic">n</span> = 3.</p>
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<p>LSV peak current change (Δ<span class="html-italic">I</span>) in 5 mM [Fe(CN)<sub>6</sub>]<sup>3−</sup>/<sup>4−</sup> solution for (<b>A</b>) interference study of the immunosensor towards Ses i 4 (a), Ses i 5 (b), black kidney bean lectin (c), and BSA (d); and for (<b>B</b>) interference study of the immunosensor towards Ses i 5 (a), Ses i 4 (b), black kidney bean lectin (c), and BSA (d). Error bars represent standard deviation, <span class="html-italic">n</span> = 3. Different lowercase letters mean significant differences (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Stability study of the immunosensor for (<b>A</b>) Ses i 4 and (<b>B</b>) Ses i 5 at days 0, 2, 4, 8, and 16. Error bars represent standard deviation, <span class="html-italic">n</span> = 3. Different lowercase letters mean significant differences (<span class="html-italic">p</span> &lt; 0.05).</p>
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