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15 pages, 1366 KiB  
Article
Disentangling the Roles of Climate Variables in Forest Fire Occurrences in China
by Chenqin Lian, Zhiming Feng, Hui Gu and Beilei Gao
Remote Sens. 2025, 17(1), 88; https://doi.org/10.3390/rs17010088 - 29 Dec 2024
Viewed by 573
Abstract
In the context of global warming, climate strongly affects forest fires. With long-term and strict fire prevention policies, China has become a unique test arena for comprehending the role of climatic variables in affecting forest fires. Here, using GIS spatial analysis, Pearson correlation, [...] Read more.
In the context of global warming, climate strongly affects forest fires. With long-term and strict fire prevention policies, China has become a unique test arena for comprehending the role of climatic variables in affecting forest fires. Here, using GIS spatial analysis, Pearson correlation, and geographical detector, the climate drivers of forest fires in China are revealed using the 2003–2022 active fire data from the MODIS C6 and climate products from CHELSA (Climatologies at high resolution for the Earth’s land surface areas). The main conclusions are as follows: (1) In total, 82% of forest fires were prevalent in the southern and southwestern forest regions (SR and SWR) in China, especially in winter and spring. (2) Forest fires were mainly distributed in areas with a mean annual temperature and annual precipitation of 14~22 °C (subtropical) and 800~2000 mm (humid zone), respectively. (3) Incidences of forest fires were positively correlated with temperature, potential evapotranspiration, surface downwelling shortwave flux, and near-surface wind speed but negatively correlated with precipitation and near-surface relative humidity. (4) Temperature and potential evapotranspiration dominated the roles in determining spatial variations of China’s forest fires, while the combination of climate variables complicated the spatial variation. This paper not only provides new insights on the impact of climate drives on forest fires, but also offers helpful guidance for fire management, prevention, and forecasting. Full article
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<p>Annual average number (<b>a</b>,<b>b</b>) and monthly average number (<b>c</b>) of forest fires in China during 2003–2022.</p>
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<p>The trend of climatic factors in forest fire areas of China.</p>
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<p>Climatic factors and forest fires relationships.</p>
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<p>Correlations between forest fire occurrence and climate factors.</p>
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17 pages, 2722 KiB  
Article
The Effects of Fire Intensity on the Biochemical Properties of a Soil Under Scrub in the Pyrenean Subalpine Stage
by Andoni Alfaro-Leranoz, David Badía-Villas, Clara Martí-Dalmau, Marta Escuer-Arregui and Silvia Quintana-Esteras
Fire 2024, 7(12), 452; https://doi.org/10.3390/fire7120452 - 1 Dec 2024
Viewed by 647
Abstract
Fire causes changes in many soil attributes, depending on multiple factors which are difficult to control in the field, such as maximum temperature, heat residence time, charred material incorporation, etc. The objective of this study is to evaluate the effect of a gradient [...] Read more.
Fire causes changes in many soil attributes, depending on multiple factors which are difficult to control in the field, such as maximum temperature, heat residence time, charred material incorporation, etc. The objective of this study is to evaluate the effect of a gradient of fire intensities on soils at the cm scale. Undisturbed topsoil monoliths were sampled under scrubs in the subalpine stage in the Southern Pyrenees (NE Spain). They were burned, under controlled conditions in a combustion tunnel, to obtain four charring intensities (CIs), combining two temperatures (50 and 80 °C) and two residence times (12 and 24 min) reached at 1 cm depth from the soil. Unburned soil samples were used as a control. All soils were sampled, cm by cm, up to 3 cm deep. The following soil properties were measured: soil respiration (basal, bSR and normalized, nSR), β-D-glucosidase (GLU), microbial biomass carbon (MBC), glomalin-related soil proteins (GRSPs), soil organic carbon (SOC), labile carbon (DOC), recalcitrant organic carbon (ROC), total nitrogen (TN), soil pH, electrical conductivity (EC) and soil water repellency (SWR). Even at low intensities, GLU, SOC and total GRSP were significantly reduced and, conversely, SWR was enhanced. At the higher CIs, additional soil properties were significantly reduced (MBC and C/N) or increased (DOC, ROC, nSR, easily extractable GRSP). This study demonstrates that there is a differential degree of thermal sensitivity in the measured biochemical soil properties. Furthermore, these properties are more affected at 0–1 cm than at 1–2 and 2–3 cm soil thicknesses. Full article
(This article belongs to the Special Issue Post-fire Effects on Environment)
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<p>(<b>a</b>) Experimental burning setup; (<b>b</b>) thermocouples’ arrangement at the different soil depths: 1, 2 and 3 cm.</p>
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<p>Fire’s effects on (<b>a</b>) soil organic matter: soil organic carbon, (<b>b</b>) labile carbon, (<b>c</b>) recalcitrant organic carbon and (<b>d</b>) C/N ratio. Lowercase letters on top of the bars indicate significant differences between treatments and those between brackets between depths (<span class="html-italic">p</span> &lt; 0.05). Uppercase letters on top of the bars indicate significant differences within all samples when the interaction between treatment and depth was significant. In each bar, the mean (<span class="html-italic">n</span> = 3) and the standard deviation are represented.</p>
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<p>Fire’s effects on (<b>a</b>) soil organic matter: soil organic carbon, (<b>b</b>) labile carbon, (<b>c</b>) recalcitrant organic carbon and (<b>d</b>) C/N ratio. Lowercase letters on top of the bars indicate significant differences between treatments and those between brackets between depths (<span class="html-italic">p</span> &lt; 0.05). Uppercase letters on top of the bars indicate significant differences within all samples when the interaction between treatment and depth was significant. In each bar, the mean (<span class="html-italic">n</span> = 3) and the standard deviation are represented.</p>
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<p>Fire’s effects on soil biological properties: (<b>a</b>) microbial biomass carbon (MBC), (<b>b</b>) β-D-glucosidase activity (GLU), (<b>c</b>) basal soil respiration (bSR) and (<b>d</b>) normalized soil respiration (nSR). Lowercase letters on top of the bars indicate significant differences between treatments and those between brackets between depths (<span class="html-italic">p</span> &lt; 0.05). Uppercase letters on top of the bars indicate significant differences within all samples when the interaction between treatment and depth was significant. In each bar, the mean (<span class="html-italic">n</span> = 3) and the standard deviation are represented.</p>
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<p>Fire’s effects on soil biological properties: (<b>a</b>) microbial biomass carbon (MBC), (<b>b</b>) β-D-glucosidase activity (GLU), (<b>c</b>) basal soil respiration (bSR) and (<b>d</b>) normalized soil respiration (nSR). Lowercase letters on top of the bars indicate significant differences between treatments and those between brackets between depths (<span class="html-italic">p</span> &lt; 0.05). Uppercase letters on top of the bars indicate significant differences within all samples when the interaction between treatment and depth was significant. In each bar, the mean (<span class="html-italic">n</span> = 3) and the standard deviation are represented.</p>
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<p>Fire’s effects on glomalin-related soil proteins fractions (GRSP): (<b>a</b>) total fraction (T) and (<b>b</b>) relative labile fraction (EE). Lowercase letters on top of the bars indicate significant differences between treatments and those between brackets between depths (<span class="html-italic">p</span> &lt; 0.05). In each bar, the mean (<span class="html-italic">n</span> = 3) and the standard deviation are represented.</p>
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<p>Fire’s effects on (<b>a</b>) soil pH and (<b>b</b>) soil electric conductivity (EC). Lowercase letters on top of the bars indicate significant differences between treatments and those between brackets between depths (<span class="html-italic">p</span> &lt; 0.05). Uppercase letters on top of the bars indicate significant differences within all samples when the interaction between treatment and depth was significant. In each bar, the mean (<span class="html-italic">n</span> = 3) and the standard deviation are represented.</p>
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<p>Occurrence (%) of soil water repellency (SWR) according to the Water Drop Penetration Time (WDPT) test for the unburned (UB) and burned (LS, LL, HS, HL) samples, within the different soil depths (0–1, 1–2 and 2–3 cm). SWR classes defined by [<a href="#B33-fire-07-00452" class="html-bibr">33</a>].</p>
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<p>Score and loading plots of the ANOVA simultaneous component analysis (ASCA). (<b>a</b>) Scores and (<b>b</b>) loadings for treatment: charred intensity (CI); (<b>c</b>) scores and (<b>d</b>) loadings for soil depth: circles (0–1 cm), triangles (1–2 cm) and squares (2–3 cm); and (<b>e</b>) scores and (<b>f</b>) loadings for the interaction between treatment and depth. Blue dots from score plots refer to unburned (UB), light brown to low temperature and short time (LS), dark brown to low temperature and long time (LL), gray to high temperature and short time (HS) and black to high temperature and long time (HL). Abbreviations from loading plots refer to soil organic carbon (SOC), labile or dissolved organic carbon (DOC), recalcitrant organic carbon (ROC), total glomalin-related soil proteins (T-GRSPs), labile GRSP (EE-GRSPs), microbial biomass carbon (MBC), β-D-glucosidase activity (GLU), basal soil respiration (bSR), normalized soil respiration (nSR), electrical conductivity (EC) and soil water repellency (SWR).</p>
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16 pages, 5103 KiB  
Article
Investigation of Tribological Behavior of PTFE Composites Reinforced with Bronze Particles by Taguchi Method
by Ferit Ficici, Ismail Ozdemir, Thomas Grund and Thomas Lampke
J. Compos. Sci. 2024, 8(10), 398; https://doi.org/10.3390/jcs8100398 - 2 Oct 2024
Viewed by 823
Abstract
Reinforced PTFE materials can be designed to show high mechanical stability against harder materials under sliding wear conditions. Especially bearing metal-reinforced PTFE is of high practical interest. In this class of materials, bronze-filled PTFE was reported to obtain high wear resistance, a low [...] Read more.
Reinforced PTFE materials can be designed to show high mechanical stability against harder materials under sliding wear conditions. Especially bearing metal-reinforced PTFE is of high practical interest. In this class of materials, bronze-filled PTFE was reported to obtain high wear resistance, a low coefficient of friction (COF), and excellent self-lubrication properties in sliding conditions. In the statistical approach of this work, PTFE composites reinforced with 25 vol%, 40 vol%, and 60 vol% bronze particles were evaluated against pure PTFE regarding wear behavior under varied wear test parameters, i.e., material, normal load, and sliding speed. Wear tests were planned to use a standard orthogonal array based on the Taguchi design method. An analysis of variance test was utilized to quantify the effects of test parameters on the wear behavior of the bronze/PTFE composites and pure PTFE. According to the variance analysis, the material type has the largest influence on the COF and the specific wear rate (SWR) under test conditions of this work. Both COF and SWR were found to be influenced by the material type (29.83% and 96.16%), the normal load (33.34% and 0.95%), and sliding speed (9.14% and 1.28%). The lowest SWR and COF values were achieved at the optimum wear test conditions where the wear test parameters were 1 m/s sliding speed (A4B2C2) at PTFE + 60 vol.% bronze reinforced composite 50 N application load and 0.32 m/s sliding speed (A4B3C1) at PTFE + 60 vol.% bronze reinforced composite 100 N application load, respectively. Full article
(This article belongs to the Section Polymer Composites)
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<p>Actual images of the test samples.</p>
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<p>Pin-on disc wear test device.</p>
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<p>Main effect plots for (<b>a</b>) <span class="html-italic">COF</span> and (<b>b</b>) <span class="html-italic">SWR</span>.</p>
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<p>The friction map of (<b>a</b>) pure PTFE, (<b>b</b>) PTFE + 25% bronze particles, (<b>c</b>) PTFE + 40% bronze particles, and (<b>d</b>) PTFE + 60% bronze particles.</p>
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<p>The wear map of (<b>a</b>) pure PTFE, (<b>b</b>) PTFE + 25 vol% bronze particles, (<b>c</b>) PTFE + 40 vol% bronze particles, and (<b>d</b>) PTFE + 60 vol% bronze particles.</p>
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<p>Worn pin surfaces of (<b>a</b>) pure PTFE polymer material and (<b>b</b>) PTFE composite reinforced with 60 vol.% bronze particles.</p>
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<p>Transfer layers accumulated on the AISI 440C stainless steel disc after sliding with (<b>a</b>) pure PTFE polymer and (<b>b</b>) PTFE composite reinforced with 60 vol.% bronze particles.</p>
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<p>Optical (<b>a</b>) and SEM images (<b>b</b>) of the worn surfaces of a 60 vol% bronze-reinforced PTFE composite tested under wear conditions of 100 N and 1.0 m/s.</p>
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14 pages, 2693 KiB  
Article
Thermally Active Medium-Density Fiberboard (MDF) with the Addition of Phase Change Materials for Furniture and Interior Design
by Julia Dasiewicz, Anita Wronka, Aleksandra Jeżo and Grzegorz Kowaluk
Materials 2024, 17(16), 4001; https://doi.org/10.3390/ma17164001 - 12 Aug 2024
Viewed by 1673
Abstract
No matter where we reside, the issue of greenhouse gas emissions impacts us all. Their influence has a disastrous effect on the earth’s climate, producing global warming and many other irreversible environmental impacts, even though it is occasionally invisible to the independent eye. [...] Read more.
No matter where we reside, the issue of greenhouse gas emissions impacts us all. Their influence has a disastrous effect on the earth’s climate, producing global warming and many other irreversible environmental impacts, even though it is occasionally invisible to the independent eye. Phase change materials (PCMs) can store and release heat when it is abundant during the day (e.g., from solar radiation), for use at night, or on chilly days when buildings need to be heated. As a consequence, buildings use less energy to heat and cool, which lowers greenhouse gas emissions. Consequently, research on thermally active medium-density fiberboard (MDF) with PCMs is presented in this work. MDF is useful for interior design and furniture manufacturing. The boards were created using pine (Pinus sylvestris L.) and spruce (Picea abies L.) fibers, urea–formaldehyde resin, and PCM powder, with a phase transition temperature of 22 °C, a density of 785 kg m−3, a latent heat capacity of 160 kJ kg−1, a volumetric heat capacity of 126 MJ m−3, a specific heat capacity of 2.2 kJ kgK−1, a thermal conductivity of 0.18 W mK−1, and a maximum operating temperature of 200 °C. Before resination, the wood fibers were divided into two outer layers (16%) and an interior layer (68% by weight). Throughout the resination process, the PCM particles were solely integrated into the inner layer fibers. The mats were created by hand. A hydraulic press (AKE, Mariannelund, Sweden) was used to press the boards, and its operating parameters were 180 °C, 20 s/mm of nominal thickness, and 2.5 MPa for the maximum unit pressing pressure. Five variants of MDF with a PCM additive were developed: 0%, 5%, 10%, 30%, and 50%. According to the study, scores at the MOR, MOE, IB, and screw withdrawal resistance (SWR) tests decreased when PCM content was added, for example, MOE from 3176 to 1057 N mm−2, MOR from 41.2 to 11.5 N mm−2, and IB from 0.78 to 0.27 N mm−2. However, the results of the thickness swelling and water absorption tests indicate that the PCM particles do not exhibit a substantial capacity to absorb water, retaining the dimensional stability of the MDF boards. The thickness swelling positively decreased with the PCM content increase from 15.1 to 7.38% after 24 h of soaking. The panel’s thermal characteristics improved with the increasing PCM concentration, according to the data. The density profiles of all the variations under consideration had a somewhat U-shaped appearance; however, the version with a 50% PCM content had a flatter form and no obvious layer compaction on the panel surface. Therefore, certain mechanical and physical characteristics of the manufactured panels can be enhanced by a well-chosen PCM addition. Full article
(This article belongs to the Special Issue Thermal Stability and Fire Performance of Polymeric Materials)
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<p>Influence of various contents of PCM on the MOR of produced MDF.</p>
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<p>Influence of various contents of PCM on the MOE of produced MDF.</p>
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<p>Water absorption of the MDF produced with the use of various contents of PCM.</p>
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<p>Thickness swelling of the MDF produced with the use of various contents of PCM.</p>
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<p>Thermal properties of MDF produced with different contents of PCM.</p>
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<p>Screw withdrawal resistance of the MDF produced with the use of various contents of PCM.</p>
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<p>Internal bond of the MDF produced with the use of various contents of PCM.</p>
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<p>Density profiles of tested samples.</p>
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8 pages, 1987 KiB  
Proceeding Paper
Effects of Tribology and Mechanical Properties on Silicon Carbide and Glass Fiber-Reinforced Hybrid Nanocomposites
by Maridurai Thirupathy and Muthuraman Vadivel
Eng. Proc. 2024, 61(1), 46; https://doi.org/10.3390/engproc2024061046 - 17 Feb 2024
Viewed by 774
Abstract
This study aims to enhance the mechanical and wear properties of hybrid nanocomposites by incorporating SiC nanoparticles and glass fibers into an epoxy resin matrix, utilizing a neural network for optimization. The mechanical properties were evaluated via flexural, impact, and wear tests. SiC [...] Read more.
This study aims to enhance the mechanical and wear properties of hybrid nanocomposites by incorporating SiC nanoparticles and glass fibers into an epoxy resin matrix, utilizing a neural network for optimization. The mechanical properties were evaluated via flexural, impact, and wear tests. SiC nanoparticle concentrations were varied at three levels using the Taguchi technique. The results were optimized with the Taguchi signal-to-noise ratio approach. Regression analysis was used to determine the wear rate, flexural strength, and impact properties of the composites. SiC reinforcement significantly influenced the flexural and impact strength, along with wear resistance. The composition with 2% SiC showed a flexural strength of 95 MPa, while 4% and 6% SiC compositions exhibited strengths of 110.5 MPa and 125 MPa, respectively. The impact strength followed a similar trend. The wear test results demonstrated a decrease in the specific wear rate (Swr) and coefficient of friction (CoF) with an increasing SiC nanoparticle percentage. The optimal parameters were identified as 6% SiC nanoparticle loading, 15 N load, 160 RPM rotation speed, and a 40.2 mm sliding distance. The enhancement in impact strength is attributed to SiC nanoparticle reinforcement. The results were further refined using an artificial neural network for improved predictability. This research underscores the effectiveness of hybrid nanocomposites with SiC nanoparticles and glass fibers, as well as the potential of neural networks for process optimization, benefiting industries requiring high-performance materials. Full article
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<p>Illustration of flexural test setup.</p>
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<p>Impact result obtained from the experiment.</p>
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<p>Optimal combination for minimizing the responses.</p>
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<p>Surface plot of the responses (<b>a</b>) specific wear rate, (<b>b</b>) Coefficient of friction.</p>
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<p>SEM analysis of the composite.</p>
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<p>Accuracy of the model developed in this research.</p>
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20 pages, 7949 KiB  
Article
Straw Inputs Improve Soil Hydrophobicity and Enhance Organic Carbon Mineralization
by Bo-Yan Zhang, Sen Dou, Dan Guo and Song Guan
Agronomy 2023, 13(10), 2618; https://doi.org/10.3390/agronomy13102618 - 14 Oct 2023
Cited by 6 | Viewed by 2003
Abstract
The mechanism of the influence of soil water repellency (SWR) and agglomeration stability on soil organic carbon (SOC) mineralization has not been thoroughly studied following different methods of returning straw to the field. The research background in this study was ordinary black soil, [...] Read more.
The mechanism of the influence of soil water repellency (SWR) and agglomeration stability on soil organic carbon (SOC) mineralization has not been thoroughly studied following different methods of returning straw to the field. The research background in this study was ordinary black soil, and the addition of straw was accomplished via straw mixing (CT), straw mulching (CM), straw deep burying (CD), and straw tripling deep burial (CE). A 120-day long-term incubation test was used to measure the contact angle between water droplets and soil, the particle size distribution of aggregates and their organic carbon (OC) content, organic carbon pool (OCP) content, OC contribution, and soil CO2-C release, the extent of SWR and the direct effect of agglomerates on SOC mineralization were assessed under different straw return methods. The results revealed that the water-droplet–soil contact angle (CA) was much greater and the rate of CA decline was significantly lower in the CD treatment compared to the CT, CM, and CE treatments, the rate of water droplet penetration on the soil surface was slower, and the SWR was improved. The CD treatment significantly increased the content of macroaggregates and their OCP content, and also significantly increased the content of microaggregates’ OC. The CO2-C emission rate and cumulative emissions were enhanced by adding the same amount of straw, with the most significant enhancement in the deep straw treatment. The cumulative CO2-C emission rate and SOC mineralization significantly increased with increases in SWR, macroaggregates content, and microaggregates OC content, but significantly decreased with increases in macroaggregates’ OC content, according to principal component analysis and Pearson’s correlation analysis. These results highlight the extent of SWR and the direct effect of agglomerate particle size distribution and OC content on SOC mineralization under different straw return methods. This will help to consolidate soil structural stability and nutrient management to support productivity and SOC sequestration in different agricultural systems. Full article
(This article belongs to the Section Soil and Plant Nutrition)
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Graphical abstract

Graphical abstract
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<p>Soil morphology of water droplets on the soil surface of each treatment at 0 s, 1 s, 3 s, and 5 s. The experimental treatments were the control (CK); straw mix (CT); straw mulch (CM); straw deep (CD); and straw tripling deep burying (CE).</p>
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<p>Changes in CA on the soil surface of water droplets on each treatment with time and the rate of CA decrease. The experimental treatments were the control (CK); straw mixture (CT); straw mulch (CM); straw deep burying (CD); and straw tripling deep burying (CE). Bubble size indicates CA, bubble color indicates CA decline rate, and letters indicate significant differences in CA among treatments (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Distribution of soil aggregates content (<b>a</b>), aggregate organic carbon content (<b>b</b>), aggregate organic carbon pool content (<b>c</b>) and aggregate organic carbon contribution (<b>d</b>) under different methods of straw addition. The experimental treatments were the control (CK); straw mixture (CT); straw mulch (CM); straw deep burial (CD); and straw tripling deep burial (CE). Upper case letters indicate significant differences (<span class="html-italic">p</span> &lt; 0.05) among different grain sizes. Lowercase letters indicate significant differences between treatments (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>CO<sub>2</sub>-C emission rates of straw mixing (<b>a</b>), straw mulching (<b>b</b>), straw deep burial (<b>c</b>), and straw tripling deep burying (<b>d</b>).</p>
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<p>Cumulative CO<sub>2</sub>-C emissions from straw mixing (<b>a</b>), straw mulching (<b>b</b>), straw deep burial (<b>c</b>), and straw tripling deep burying (<b>d</b>).</p>
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<p>Principal component analysis (PCA) of SWR, soil aggregates, and cumulative CO<sub>2</sub>-C emissions under different straw addition methods. The experimental treatments were control (CK); straw mixture (CT); straw mulching (CM); straw deep burying (CD); and straw doubled deep burying (CE).</p>
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<p>Pearson correlation analysis of SWR, soil aggregates, and CO<sub>2</sub>-C emission under different straw addition methods. A, B, C, and D are &gt;2 mm, 2–0.25 mm, 0.25–0.053 mm, and &lt;0.053 mm agglomerate content; E, F, G, and H are &gt;2 mm, 2–0.25 mm, 0.25–0.053 mm, and &lt;0.053 mm agglomerate OC content; and I, J, K, and L are &gt;2 mm, 2–0.25 mm, 0.25–0.053 mm, and &lt;0.053 mm agglomerates OCP content; M, N, O, and P are &gt;2 mm, 2–0.25 mm, 0.25–0.053 mm, and &lt;0.053 mm agglomerates OC contribution, respectively; Q, R, S, and T are the CA of the droplets to the soil for 0 s, 1 s, 3 s, and 5 s, respectively, and U is the cumulative CO<sub>2</sub>-C emission.</p>
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15 pages, 9181 KiB  
Article
Prediction of Tribological Properties of UHMWPE/SiC Polymer Composites Using Machine Learning Techniques
by Abdul Jawad Mohammed, Anwaruddin Siddiqui Mohammed and Abdul Samad Mohammed
Polymers 2023, 15(20), 4057; https://doi.org/10.3390/polym15204057 - 11 Oct 2023
Cited by 4 | Viewed by 1692
Abstract
Polymer composites are a class of material that are gaining a lot of attention in demanding tribological applications due to the ability of manipulating their performance by changing various factors, such as processing parameters, types of fillers, and operational parameters. Hence, a number [...] Read more.
Polymer composites are a class of material that are gaining a lot of attention in demanding tribological applications due to the ability of manipulating their performance by changing various factors, such as processing parameters, types of fillers, and operational parameters. Hence, a number of samples under different conditions need to be repeatedly produced and tested in order to satisfy the requirements of an application. However, with the advent of a new field of triboinformatics, which is a scientific discipline involving computer technology to collect, store, analyze, and evaluate tribological properties, we presently have access to a variety of high-end tools, such as various machine learning (ML) techniques, which can significantly aid in efficiently gauging the polymer’s characteristics without the need to invest time and money in a physical experimentation. The development of an accurate model specifically for predicting the properties of the composite would not only cheapen the process of product testing, but also bolster the production rates of a very strong polymer combination. Hence, in the current study, the performance of five different machine learning (ML) techniques is evaluated for accurately predicting the tribological properties of ultrahigh molecular-weight polyethylene (UHMWPE) polymer composites reinforced with silicon carbide (SiC) nanoparticles. Three input parameters, namely, the applied pressure, holding time, and the concentration of SiCs, are considered with the specific wear rate (SWR) and coefficient of friction (COF) as the two output parameters. The five techniques used are support vector machines (SVMs), decision trees (DTs), random forests (RFs), k-nearest neighbors (KNNs), and artificial neural networks (ANNs). Three evaluation statistical metrics, namely, the coefficient of determination (R2-value), mean absolute error (MAE), and root mean square error (RMSE), are used to evaluate and compare the performances of the different ML techniques. Based upon the experimental dataset, the SVM technique was observed to yield the lowest error rates—with the RMSE being 2.09 × 10−4 and MAE being 2 × 10−4 for COF and for SWR, an RMSE of 2 × 10−4 and MAE of 1.6 × 10−4 were obtained—and highest R2-values of 0.9999 for COF and 0.9998 for SWR. The observed performance metrics shows the SVM as the most reliable technique in predicting the tribological properties—with an accuracy of 99.99% for COF and 99.98% for SWR—of the polymer composites. Full article
(This article belongs to the Section Polymer Composites and Nanocomposites)
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<p>Frequency of dataset, (<b>a</b>) coefficient of friction, and (<b>b</b>) specific wear rate.</p>
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<p>Structure of a typical decision tree.</p>
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<p>Random forest structure of three decision trees.</p>
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<p>K-nearest neighbors.</p>
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<p>SVM margin.</p>
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<p>ANN model finalized during the experiments.</p>
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<p>Decision tree regression performances for (<b>a</b>) COF and (<b>b</b>) SWR predictions.</p>
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<p>Random forest regression performances for (<b>a</b>) COF and (<b>b</b>) SWR.</p>
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<p>KNN regression performances for (<b>a</b>) COF and (<b>b</b>) SWR.</p>
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<p>SVM regression performances for (<b>a</b>) COF and (<b>b</b>) SWR.</p>
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<p>ANN regression performances for (<b>a</b>) COF and (<b>b</b>) SWR.</p>
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19 pages, 2619 KiB  
Article
Sustainable Recovery of Phenolic Compounds from Distilled Rosemary By-Product Using Green Extraction Methods: Optimization, Comparison, and Antioxidant Activity
by Maria Irakli, Adriana Skendi, Elisavet Bouloumpasi, Stamatia Christaki, Costas G. Biliaderis and Paschalina Chatzopoulou
Molecules 2023, 28(18), 6669; https://doi.org/10.3390/molecules28186669 - 17 Sep 2023
Cited by 16 | Viewed by 3445
Abstract
Rosemary solid distillation waste (SWR), a by-product of the essential oil industry, represents an important source of phenolic antioxidants. Green technologies such as ultrasound-assisted extraction (UAE), microwave-assisted extraction (MAE), and accelerated solvent extraction (ASE) of phenolic compounds from SWR were optimized as valorization [...] Read more.
Rosemary solid distillation waste (SWR), a by-product of the essential oil industry, represents an important source of phenolic antioxidants. Green technologies such as ultrasound-assisted extraction (UAE), microwave-assisted extraction (MAE), and accelerated solvent extraction (ASE) of phenolic compounds from SWR were optimized as valorization routes to maximize yield, rosmarinic acid (RMA), carnosol (CARO) and carnosic acid (CARA) contents. Response surface methodology was used in this context, with ethanol concentration (X1), extraction temperature (X2), and time (X3) being the independent variables. A second-order polynomial model was fitted to the data, and multiple regression analysis and analysis of variance were used to determine model fitness and optimal conditions. Ethanol concentration was the most influential extraction parameter, affecting phenolic compounds, while the influence of other parameters was moderate. The optimized conditions were as follows: X1: 67.4, 80.0, and 59.0%, X2: 70, 51, and 125 °C, and X3: 15, 10, and 7 min for MAE, UAE, and ASE, respectively. A comparison of optimized MAE, UAE, and ASE with conventional Soxhlet extraction techniques indicated that ASE provided a higher extraction yield and content of phenolic compounds. However, UAE represented the best process from an environmental point of view, allowing an improved extraction of phenolics from SWR with high energy efficiency and low energy costs. Full article
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<p>Total ion chromatogram (TIC) by negative ion mode electrospray ionization mass spectrometry (ESI/MS) of the aqueous (<b>a</b>) and 80% ethanolic (<b>b</b>) extracts of SWR obtained using ASE. Peaks on the chromatogram correspond to the following: 1, quinic acid; 2, citric acid; 3, danshensu; 4, gallocatechin isomer; 5, isorhamnetin-3-O-D-glucoside; 6, rosmarinic acid; 7, salicylic acid (internal standard); 8, 9, and 10, rosmanol isomer; 11, carnosol; 12, carnosic acid; and 13, rosmanol isomer.</p>
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<p>Contour plots for extraction yield (EY), rosmarinic acid (RMA), carnosol (CARO), and carnosic acid (CARA) as a function of ethanol concentration, extraction temperature, and time under ultrasound-assisted extraction (UAE). The values of the missing factor were kept at the center point, e.g., ethanol concentration 40% (Ethanol 40), time extraction 6 min (Time 6) and temperature extraction 45 °C (Temp 45).</p>
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<p>Contour plots for extraction yield (EY), rosmarinic acid (RMA), carnosol (CARO), and carnosic acid (CARA) as a function of ethanol concentration, extraction temperature, and time under microwave-assisted extraction (MAE). The values of the missing factor were kept at the center point, e.g., ethanol concentration 40% (Ethanol 40), time extraction 6 min (Time 9) and temperature extraction 45 °C (Temp 65).</p>
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<p>Contour plot for extraction yield (EY), rosmarinic acid (RMA), carnosol (CARO), and carnosic acid (CARA) as a function of ethanol concentration, extraction temperature, and time during accelerated solvent extraction (ASE). The values of the missing factor were kept at the center point, e.g., ethanol concentration 40% (Ethanol 40), time extraction 6 min (Time 5) and temperature extraction 45 °C (Temp 65).</p>
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<p>Effect of different extraction processes on (<b>a</b>) total phenolic content (TPC), total flavonoid content (TFC), and (<b>b</b>) antioxidant activity of the obtained extracts as evaluated by 2,2′-azinobis-(3-ethylbenzothiazoline-6-sulfonic acid (ABTS), 2,2-diphenyl-1-picrylhydrazyl (DPPH), and ferric reducing antioxidant power (FRAP). Bars of the same color capped with the same numbers are not significantly different (<span class="html-italic">p</span> &gt; 0.05) from each other, as determined by Duncan’s multiple range test.</p>
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14 pages, 1393 KiB  
Article
Mung Bean Is Better Than Soybean in the Legume–Wheat Rotation System for Soil Carbon and Nitrogen Sequestration in Calcareous Soils of a Semiarid Region
by Chunxia Li, Guoyin Yuan, Lin Qi, Youjun Li, Sifan Cheng, Guanzheng Shang, Taiji Kou and Yuyi Li
Agronomy 2023, 13(9), 2254; https://doi.org/10.3390/agronomy13092254 - 27 Aug 2023
Viewed by 2291
Abstract
Small changes in soil aggregates-associated organic carbon and soil nitrogen (N) can induce huge fluctuations in greenhouse gas emissions and soil fertility. However, there is a knowledge gap regarding the responses to long-term continuous rotation systems, especially in N-fixing and non-N-fixing crop wheat [...] Read more.
Small changes in soil aggregates-associated organic carbon and soil nitrogen (N) can induce huge fluctuations in greenhouse gas emissions and soil fertility. However, there is a knowledge gap regarding the responses to long-term continuous rotation systems, especially in N-fixing and non-N-fixing crop wheat in terms of the distribution of soil aggregates and the storage of soil carbon (C) and N in aggregates in the semiarid calcareous soil of Central China. This information is critical for advancing knowledge on C and N sequestration of soil aggregates in rainfed crop rotation systems. Our aim was to determine which legume (soybean (Glycine max)– or mung bean (Vigna radiata)–wheat (Triticum aestivum) rotation practice is more conducive to the formation of good soil structure and C and N fixation. A 10-year field experiment, including a soybean (Glycine max)–winter wheat (Triticum aestivum) rotation (SWR) with yield increments of 2020 compared to 2010 achieving 18.28% (soybean) and 26.73% (wheat), respectively, and a mung bean (Vigna radiata)–winter wheat rotation (MWR) achieving 32.66% (mung bean) and 27.38% (wheat), as well as farmland fallow, was conducted in Henan Province, China. The soil organic carbon (SOC), N content in the soil, and the soil aggregates were investigated. Legume–wheat rotation cropping enhanced the proportion of the >2 mm soil fractions and reduced the <0.053 mm silt + clay in the 0–40 cm soil profile. In the 0–30 cm soil layer, the SWR had a greater increment of the >2 mm aggregate fractions than the MWR. Two legume–winter wheat rotations enhanced the C and N sequestration that varied with soil depths and size fractions of the aggregate. In contrast, the MWR had greater SOC stocks in all fractions of all sizes in the 0–40 cm soil layers. In addition, the greater storage of N in the macro-, micro-, and silt + clay fractions was observed in the 0–30 cm layers; the MWR enhanced the C/N ratios in most of the size aggregates compared with the SWR. The MWR cropping system is more beneficial to the formation of good soil structure and the increasement of C and N reserves in soil. Thus, these findings show that mung bean, in contrast with soybean in the legume–wheat rotation system of a semiarid temperate zone, may offer soil quality improvement. Full article
(This article belongs to the Special Issue Effects of Tillage, Cover Crop and Crop Rotation on Soil)
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<p>Distribution of soil aggregates in the 0–40 cm soil profile of plots with three different treatments (N 34°32′, E 112°16′). Note: Different small letters above the bars indicate significant differences among treatments at the level. <span class="html-italic">SWR</span> and <span class="html-italic">MWR</span> are the abbreviations of soybean–winter wheat rotation and mung bean–winter wheat rotation, respectively. Values are means ± 1 SE (<span class="html-italic">n</span> = 4).</p>
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<p>Soil aggregate associated organic carbon in the 0–40 cm soil profile under different land use types. Note: Different small letters above the bars indicate significant differences among treatments at the level. <span class="html-italic">SWR</span> and <span class="html-italic">MWR</span> are the abbreviations of soybean–winter wheat rotation and mung bean–winter wheat rotation, respectively. Values are means ± 1 SE (<span class="html-italic">n</span> = 4).</p>
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<p>Soil aggregate associated nitrogen in the 0–40 cm soil profile of different land use types. Note: Different small letters above the bars indicate significant differences among treatments at the level. SWR and MWR are the abbreviations of soybean–winter wheat rotation and mung bean–winter wheat rotation, respectively. Values are means ± 1 SE (<span class="html-italic">n</span> = 4).</p>
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<p>The C/N ratio of different aggregate size fractions in the 0–40 cm soil profiles under different land use types. Note: Different small letters above the bars indicate significant differences among treatments at the level. <span class="html-italic">SWR</span> and <span class="html-italic">MWR</span> are the abbreviations of soybean–winter wheat rotation and mung bean–winter wheat rotation, respectively. Values are means ± 1 SE (<span class="html-italic">n</span> = 4).</p>
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<p>The partitioning proportions of soil organic carbon (SOC) and total nitrogen (TN) in aggregates in 0–20 cm, 20–30 cm, and 30–40 cm soil layers under different treatments. Note: Different small letters above the bars indicate significant differences among treatments at the level. SWR and MWR are the abbreviations of soybean–winter wheat rotation and mung bean–winter wheat rotation, respectively. Values are means ± 1 SE (<span class="html-italic">n</span> = 4).</p>
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33 pages, 7632 KiB  
Article
The Arabidopsis Deubiquitylase OTU5 Suppresses Flowering by Histone Modification-Mediated Activation of the Major Flowering Repressors FLC, MAF4, and MAF5
by Ramalingam Radjacommare, Shih-Yun Lin, Raju Usharani, Wen-Dar Lin, Guang-Yuh Jauh, Wolfgang Schmidt and Hongyong Fu
Int. J. Mol. Sci. 2023, 24(7), 6176; https://doi.org/10.3390/ijms24076176 - 24 Mar 2023
Cited by 3 | Viewed by 3042
Abstract
Distinct phylogeny and substrate specificities suggest that 12 Arabidopsis Ovarian Tumor domain-containing (OTU) deubiquitinases participate in conserved or plant-specific functions. The otu5-1 null mutant displayed a pleiotropic phenotype, including early flowering, mimicking that of mutants harboring defects in subunits (e.g., ARP6) of the [...] Read more.
Distinct phylogeny and substrate specificities suggest that 12 Arabidopsis Ovarian Tumor domain-containing (OTU) deubiquitinases participate in conserved or plant-specific functions. The otu5-1 null mutant displayed a pleiotropic phenotype, including early flowering, mimicking that of mutants harboring defects in subunits (e.g., ARP6) of the SWR1 complex (SWR1c) involved in histone H2A.Z deposition. Transcriptome and RT-qPCR analyses suggest that downregulated FLC and MAF4-5 are responsible for the early flowering of otu5-1. qChIP analyses revealed a reduction and increase in activating and repressive histone marks, respectively, on FLC and MAF4-5 in otu5-1. Subcellular fractionation, GFP-fusion expression, and MNase treatment of chromatin showed that OTU5 is nucleus-enriched and chromatin-associated. Moreover, OTU5 was found to be associated with FLC and MAF4-5. The OTU5-associated protein complex(es) appears to be distinct from SWR1c, as the molecular weights of OTU5 complex(es) were unaltered in arp6-1 plants. Furthermore, the otu5-1 arp6-1 double mutant exhibited synergistic phenotypes, and H2A.Z levels on FLC/MAF4-5 were reduced in arp6-1 but not otu5-1. Our results support the proposition that Arabidopsis OTU5, acting independently of SWR1c, suppresses flowering by activating FLC and MAF4-5 through histone modification. Double-mutant analyses also indicate that OTU5 acts independently of the HUB1-mediated pathway, but it is partially required for FLC-mediated flowering suppression in autonomous pathway mutants and FRIGIDA-Col. Full article
(This article belongs to the Special Issue Ubiquitylation in Plant Developmental and Physiological Processes)
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<p>Vegetative growth phenotypes of <span class="html-italic">otu5-1</span> mutant plants. (<b>A</b>) Full-length <span class="html-italic">OTU5a</span> and <span class="html-italic">OTU5b</span> transcripts and their encoded proteins were not detected in <span class="html-italic">otu5-1</span>. Left, schematic diagrams showing the T-DNA insertion sites (triangles, not in scale) in <span class="html-italic">OTU5a</span> and <span class="html-italic">OTU5b</span>. Exons are denoted by numbers in boxes, with coding regions shaded in black; introns are indicated by lines. L, leader exon. The positions of the genotyping primers tOTU5_5′, tOTU5_3′, and T-DNA left border primer LBa1 are indicated (<a href="#app1-ijms-24-06176" class="html-app">Table S4</a>). Middle, expression of the full-length <span class="html-italic">OTU5a</span> and <span class="html-italic">OTU5b</span> transcripts was examined by RT-PCR in Col-0 and <span class="html-italic">otu5-1</span>. The <span class="html-italic">UBQ10</span>-amplified fragment served as a loading control. Right, expression of OTU5 isoforms (a and b, arrowheads) in Col-0 and <span class="html-italic">otu5-1</span> and expression of N-terminal GS-tagged wild-type and catalytic site-mutated OTU5a (GS-OTU5, arrowhead) in complemented and overexpressing lines (<span class="html-italic">Wt-1</span>, <span class="html-italic">Wt-2</span>, <span class="html-italic">CS-1</span>, and <span class="html-italic">CS-2</span>). Nonspecific background signals are marked with asterisks. The source of these unspecific signals has not been investigated. Immunoblotting using α-OTU5b was performed with total protein extracts isolated from 15-day-old seedlings. Duplicated samples were analyzed using antisera against actin (α-Actin) to verify equal loading. (<b>B</b>) Representative seedlings 14 DAS (Col-0, <span class="html-italic">otu5-1</span>, and various complemented and overexpressed lines). (<b>C</b>) Reduced number and size of rosette leaves in <span class="html-italic">otu5-1</span> plants. A representative set of rosette leaves at 27 DAS in order of production is shown for Col-0, <span class="html-italic">otu5-1</span>, and a GS-OTU5a-complemented <span class="html-italic">otu5-1</span> line (left). Average area of each rosette leaf in order from 4–7 plants of Col-0, <span class="html-italic">otu5-1</span>, and a GS-OTU5a-complemented <span class="html-italic">otu5-1</span> line at 27 DAS (right). (<b>D</b>) Average plant heights of Col-0, <span class="html-italic">otu5-1</span>, and various complemented and overexpressed lines at 45 DAS (<span class="html-italic">n</span> = 46–49). (<b>E</b>) Representative toluidine blue-stained sections of primary inflorescence stems for Col-0 and <span class="html-italic">otu5-1</span> plants. (<b>F</b>) Average primary root lengths of seedlings for Col-0, <span class="html-italic">otu5-1</span>, and various complemented and overexpressed lines grown under long-day conditions at 12 DAS (<span class="html-italic">n</span> = 36–39). (<b>G</b>) Representative root tips of seedlings for <span class="html-italic">otu5-1</span>, Col-0, and two complemented lines at seven DAS grown under phosphate-replete conditions. Different letters denote significant differences by pairwise comparison using Student’s <span class="html-italic">t</span>-test; error bars indicate standard deviations.</p>
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<p>Reproductive growth phenotypes of <span class="html-italic">otu5-1</span> plants. (<b>A</b>) Flowering times measured either by rosette leaf number (left) or DAS (right) at bolting for Col-0 and <span class="html-italic">otu5-1</span> plants, and various complemented and overexpressed lines grown under long-day conditions. (<b>B</b>) Top or side view of representative flowers. (<b>C</b>) Representative gynoecia/pistils of mature flowers. (<b>D</b>) Averaged lengths of matured siliques (numbers of siliques averaged are indicated). (<b>E</b>) Averaged ovule number of each silique. (<b>F</b>) A significant proportion of aborted ovules (red arrows) was observed in the mature siliques of <span class="html-italic">otu5-1</span>. Left, representative dissected siliques from Col-0 and <span class="html-italic">otu5-1</span> plants. Right, ovule abortion rate. (<b>G</b>) Seed numbers for each silique for selfed Col-0 and <span class="html-italic">otu5-1</span> plants and for control (Col × Col) and reciprocal crosses between Col-0 and <span class="html-italic">otu5-1</span> plants. Different letters denote significant differences by pairwise comparison using Student’s <span class="html-italic">t</span>-test. ** <span class="html-italic">p</span> &lt; 0.01, <span class="html-italic">otu5-1</span> was compared with Col-0, or selfed <span class="html-italic">otu5-1</span> plants, control, and reciprocal crossed plants were compared with selfed Col-0 plants using Student’s <span class="html-italic">t</span>-test. Sample sizes are indicated (<span class="html-italic">n</span>). Error bars indicate standard deviations.</p>
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<p>Expression of various flowering regulators and autonomous pathway components in <span class="html-italic">otu5-1</span> plants. Expression levels in Col-0 and <span class="html-italic">otu5-1</span> seedlings of 10 (RT-PCR) or 14 DAS (RT-qPCR) for major autonomous pathway components, including <span class="html-italic">FVE</span>, <span class="html-italic">FLOWERING LOCUS D</span>, <span class="html-italic">FPA</span>, <span class="html-italic">FCA</span>, <span class="html-italic">LUMINIDEPENDENS</span>, and <span class="html-italic">FY</span> (<b>A</b>), major flowering repressors <span class="html-italic">FLC</span> and <span class="html-italic">FLC</span>-related flowering repressors <span class="html-italic">MAF1-5</span> (<b>B</b>), and major flowering activators <span class="html-italic">CO</span>, <span class="html-italic">FT</span>, and <span class="html-italic">SOC1</span> (<b>C</b>) were examined by RT-PCR (left panels) and RT-qPCR (right panels). <span class="html-italic">UBQ10</span> was used as a control. ** <span class="html-italic">p</span> &lt; 0.01, significance of expression levels for various flowering regulators in <span class="html-italic">otu5-1</span> were compared with those in Col-0 using Student’s <span class="html-italic">t</span>-test.</p>
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<p>Global and <span class="html-italic">FLC</span>-associated levels of major activating and repressive histone marks in <span class="html-italic">otu5-1</span> plants. (<b>A</b>) Global levels of various histone marks, including H3K4me3, H3K36me3, H3K36me1, H3K27me3, and ubH2B, of nuclear-enriched protein extracts prepared from ten-day-old Col-0 and <span class="html-italic">otu5-1</span> seedlings were examined by immunoblotting using antibodies as indicated. Levels of histone 3 (H3) were examined as a loading control. (<b>B</b>) A schematic diagram in scale of the <span class="html-italic">FLC</span> gene structure depicts 10 amplification regions (bars) labeled 1–10 that were analyzed by qChIP. Sequences upstream of the start codon (ATG), downstream of the stop codon, and introns are represented by lines; exons are indicated by boxes. The corresponding primer pairs are listed in <a href="#app1-ijms-24-06176" class="html-app">Table S4</a>. (<b>C</b>) The percentage qChIP amplification yields, in comparison with those amplified from input DNA, from 9–10 <span class="html-italic">FLC</span> regions using various antibodies, as indicated against H3K36me3, H3K27me3, H3K9me2, and ubH2B for <span class="html-italic">otu5-1</span> and Col-0 seedlings. Error bars indicate standard deviations.</p>
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<p><span class="html-italic">MAF4</span>- and <span class="html-italic">MAF5</span>-associated levels of major activating and repressive histone marks in <span class="html-italic">otu5-1</span> plants. (<b>A</b>,<b>B</b>) Schematic diagrams in scale showing the <span class="html-italic">MAF4</span> (<b>A</b>) and <span class="html-italic">MAF5</span> (<b>B</b>) gene structures depicting six and five amplification regions (bars), respectively, labeled 1-6 or 1-5, which were analyzed by qChIP. The gene structures of <span class="html-italic">MAF4</span> and <span class="html-italic">MAF5</span> are depicted for <span class="html-italic">FLC</span> in <a href="#ijms-24-06176-f004" class="html-fig">Figure 4</a>. The corresponding primer pairs are listed in <a href="#app1-ijms-24-06176" class="html-app">Table S4</a>. (<b>C</b>,<b>D</b>) The percentage qChIP amplification yields, in comparison with that amplified from input DNA, from six <span class="html-italic">MAF4</span> (<b>C</b>) or four to five <span class="html-italic">MAF5</span> (<b>D</b>) regions using various antibodies, as indicated against H3K36me3, H3K27me3, H3K9me2, and ubH2B in <span class="html-italic">otu5-1</span> and Col-0 seedlings. Error bars indicate standard deviations.</p>
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<p>The <span class="html-italic">A. thaliana</span> OTU5a and OTU5b proteins are nucleus-enriched and chromatin-associated. (<b>A</b>) The relative abundance of two OTU proteins, various proteasome subunits, and ubiquitin shuttle receptors in total, nuclear, and cytosolic protein fractions prepared from 10 DAS Col-0 seedlings was examined by immunoblotting with various antisera, as indicated. Antisera against histone H3 (α-H3) were analyzed to verify the purity of the nuclear fraction. Equal amounts of proteins from each fraction were analyzed. Duplicate samples were stained with BBR to show loaded proteins. (<b>B</b>) Constructs of green fluorescence protein (GFP) fusions used for transient expression were built in p2X35S-TEV-eGFP-35ST (see <a href="#sec4-ijms-24-06176" class="html-sec">Section 4</a>), with relevant components shown schematically. The restriction sites used for N- and C-terminal fusions were <span class="html-italic">Xma</span>I (X)/<span class="html-italic">Eco</span>RI (E) and <span class="html-italic">Bam</span>HI (B)/<span class="html-italic">Sal</span>I (S), respectively. Two linker sequences encoding five GA repeats (5GA) were designed to preserve the structural integrity of the introduced fusion proteins. (<b>C</b>) Nuclear enrichment of OTU5a and OTU5b was detected by transient expression of their GFP fusions in Arabidopsis protoplasts. Representative protoplasts displayed fluorescence of N- and C-terminal GFP-fused OTU5a and OTU5b. GFP alone was analyzed as a cytosolic expression reference. The split quadruple windows (bottom left) indicate that four images shown for each panel are the same optical section examined by GFP fluorescence (GFP), autofluorescence (Auto), phase contrast (DIC), and merged images (Merge). (<b>D</b>) Nuclear OTU5 isoforms were associated with chromatin. Chromatin pellets (P3) and nucleoplasmic fractions (S3) isolated from nuclei not pretreated (MNase-) or pretreated with (MNase+) 0.2 U micrococcal nuclease were subjected to immunoblotting with α-OTU5. A duplicate sample gel was stained with BBR to show loaded proteins (bottom). The molecular weight marker sizes are indicated.</p>
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<p>The Arabidopsis OTU5 protein associates with <span class="html-italic">FLC</span>, <span class="html-italic">MAF4</span>, and <span class="html-italic">MAF5</span> loci. (<b>A</b>–<b>C</b>) The association of OTU5 with various regions of <span class="html-italic">FLC</span> (<b>A</b>), <span class="html-italic">MAF4</span> (<b>B</b>), and <span class="html-italic">MAF5</span> (<b>C</b>) was analyzed using qCHIP. The percentage qChIP amplification yields was shown, in comparison with those amplified from input DNA, from nine, six, and five regions on <span class="html-italic">FLC</span>, <span class="html-italic">MAF4</span>, and <span class="html-italic">MAF5</span>, respectively. The same regions (depicted in the top panels) analyzed for various histone marks in <a href="#ijms-24-06176-f004" class="html-fig">Figure 4</a> and <a href="#ijms-24-06176-f005" class="html-fig">Figure 5</a> were analyzed using antisera against OTU5b for <span class="html-italic">otu5-1</span> and Col-0 seedlings. Error bars indicate standard deviations.</p>
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<p>Size and abundance comparison of OTU5-associated complex(es) in wild-type and <span class="html-italic">arp6-1</span> seedlings. The sizes and abundance of OTU5a- and OTU5b-associated complexes were examined by gel filtration experiments using protein extracts isolated from rosette leaves of three-week-old Col-0 and <span class="html-italic">arp6-1</span> plants. The collected even-numbered fractions (36–68) were analyzed by SDS-PAGE followed by immunoblotting with α-OTU5 antibodies. The calibrated fraction positions of the molecular weight markers are shown at the bottom; the asterisk marks an unknown signal.</p>
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<p>Homozygous <span class="html-italic">otu5 arp6</span> plants display synergistic phenotypes. (<b>A</b>) Genotyping of <span class="html-italic">arp6 otu5</span> plants by genomic DNA PCR. The presence of <span class="html-italic">arp6-1</span> (<span class="html-italic">arp6</span>) and <span class="html-italic">otu5-1</span> (<span class="html-italic">otu5</span>) T-DNA junctions was detected in the <span class="html-italic">otu5 arp6</span> double mutant (<span class="html-italic">db</span>), and the wild-type <span class="html-italic">ARP6</span> and <span class="html-italic">OTU5</span> fragments were only detected with Col-0. (<b>B</b>) Representative 21 DAS plants grown under long-day conditions. (<b>C</b>) Representative sets of rosette leaves at 27 DAS in order of production. (<b>D</b>) Representative 45 DAS plants grown under long-day conditions. (<b>E</b>) Average primary root lengths of seedlings at 12 DAS grown under long-day conditions (<span class="html-italic">n</span> = 32–41). (<b>F</b>) Representative root tips of seedlings at seven DAS grown under phosphate-replete conditions. (<b>G</b>) Representative flowers (top views, left four panels) and gynoecia/pistils (right). (<b>H</b>) Representative mature fresh-harvested (left) or alcohol-bleached siliques (right). (<b>I</b>) Averaged lengths of matured siliques. The numbers of siliques averaged are indicated. (<b>J</b>) Averaged ovule number of each silique (top) and ovule abortion rate (bottom). The numbers of siliques averaged are indicated. (<b>K</b>) Flowering times measured either by DAS (top panels) or rosette leaf number (bottom panels, Leaf #) at bolting of plants grown under long-day (LD) or short-day (SD) conditions. (<b>L</b>) Relative <span class="html-italic">FLC</span> expression levels examined by RT-qPCR in <span class="html-italic">otu5-1</span>, <span class="html-italic">arp6-1</span>, and <span class="html-italic">otu5 arp6</span> (<span class="html-italic">db</span>) plants compared with Col-0. The averaged relative <span class="html-italic">FLC</span> expression levels were determined from three biological repeats. Different letters denote significant differences by pairwise comparison using Student’s <span class="html-italic">t</span>-test; error bars indicate standard deviations.</p>
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<p>Histone H2A.Z levels on the <span class="html-italic">FLC</span>, <span class="html-italic">MAF4</span>, and <span class="html-italic">MAF5</span> loci. (<b>A</b>–<b>C</b>) The association of H2A.Z with <span class="html-italic">FLC</span> (<b>A</b>), <span class="html-italic">MAF4</span> (<b>B</b>), and <span class="html-italic">MAF5</span> (<b>C</b>) in Col-0, <span class="html-italic">arp6-1</span>, and <span class="html-italic">otu5-1</span> was analyzed using qCHIP. The percentage qChIP amplification yields from various regions depicted on the top panels (the same as those used for histone marks in <a href="#ijms-24-06176-f004" class="html-fig">Figure 4</a> and <a href="#ijms-24-06176-f005" class="html-fig">Figure 5</a>) are shown relative to those amplified from the input DNA. The analysis was conducted using antisera raised against Arabidopsis H2A.Z isoforms HTA9 and HTA11. Error bars indicate standard deviations.</p>
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<p>OTU5-mediated flowering suppression is HUB1-independent but partially required for autonomous pathway mutation-mediated <span class="html-italic">FLC</span> upregulation and late flowering. (<b>A</b>) Flowering times measured by rosette leaf number at bolting in <span class="html-italic">Col-0</span>, <span class="html-italic">otu5-1</span>, <span class="html-italic">hub1-5</span>, <span class="html-italic">hub1-4</span>, <span class="html-italic">otu5-1 hub1-5</span>, and <span class="html-italic">otu5-1 hub1-4</span> plants grown under long-day conditions; sample sizes (27–64) were indicated. (<b>B</b>) Relative <span class="html-italic">FLC</span> expression levels examined by RT-qPCR. (<b>C</b>) Flowering times measured by rosette leaf number at bolting under long-day conditions in <span class="html-italic">Col-0</span>, <span class="html-italic">otu5-1</span>, <span class="html-italic">Col-0</span>-<span class="html-italic">FRIGIDA</span>, various autonomous pathway mutants (<span class="html-italic">ld-1</span>, <span class="html-italic">fve-4</span>, and <span class="html-italic">fld-6</span>), and <span class="html-italic">otu5-1</span> crossed-in double mutants: <span class="html-italic">Col-0</span>-<span class="html-italic">FRIGIDA otu5-1</span>, <span class="html-italic">ld-1 otu5-1</span>, <span class="html-italic">fve-4 otu5-1</span>, and <span class="html-italic">fld-6 otu5-1</span>. (<b>D</b>) Relative <span class="html-italic">FLC</span> expression levels examined by RT-qPCR. The averaged relative <span class="html-italic">FLC</span> expression levels were determined from three biological repeats. Different letters denote significant differences by pairwise comparison using Student’s <span class="html-italic">t</span>-test. Error bars indicate standard deviations; <span class="html-italic">n</span> represents the sample size.</p>
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<p>Arabidopsis OTU5 is a novel flowering suppressor. OTU5 acts, potentially in an associated protein complex (OTU5c), in parallel with SWR1c- and HUB1/2-mediated pathways to epigenetically activate <span class="html-italic">FLC</span> clade repressors and suppress flowering. OTU5 primarily activates <span class="html-italic">FLC</span> and, to a lesser extent, <span class="html-italic">MAF5</span>, <span class="html-italic">MAF4</span>, and <span class="html-italic">MAF1</span>, which in turn suppress major flowering initiators <span class="html-italic">FT</span> and <span class="html-italic">SOC1</span> to suppress flowering. Under unknown mechanisms, OTU5 is involved in decreasing the deposition of the activating histone mark H3K36me3 and in the upregulation of the suppressive histone marks H3K27me3 and H3K9me2 as well as ubH2B on specific loci, such as <span class="html-italic">FLC</span>, <span class="html-italic">MAF4</span>, and <span class="html-italic">MAF5</span>. OTU5-mediated flowering suppression is distinct from the SWR1c-mediated pathway, which activates <span class="html-italic">FLC</span>-related repressors through H2A.Z deposition. OTU5 also acts independently of the HUB1/2-mediated pathway, which modulates genome-wide ubH2B levels and activates a distinct set of <span class="html-italic">FLC</span>-related repressors through distinct activating/repressive histone marks (see <a href="#sec3-ijms-24-06176" class="html-sec">Section 3</a> for details). OTU5 is, however, partially required for <span class="html-italic">FLC</span>-mediated flowering suppression in autonomous pathway mutants and <span class="html-italic">FRIGIDA</span>-Col. Transcription activation or flowering promotion is indicated by green arrows, and transcription suppression is denoted by a red bar.</p>
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18 pages, 4089 KiB  
Article
Application of Infrared Spectroscopy and Thermal Analysis in Explaining the Variability of Soil Water Repellency
by Ivan Šimkovic, Pavel Dlapa and Zuzana Feketeová
Appl. Sci. 2023, 13(1), 216; https://doi.org/10.3390/app13010216 - 24 Dec 2022
Cited by 4 | Viewed by 1527
Abstract
Forests play important role in hydrological processes such as evapotranspiration, infiltration, surface runoff, and distribution of precipitation waters. This study evaluates soil water repellency (SWR) in a mountain forest area of Slovakia (Central Europe). Findings of previous studies suggest that the variability of [...] Read more.
Forests play important role in hydrological processes such as evapotranspiration, infiltration, surface runoff, and distribution of precipitation waters. This study evaluates soil water repellency (SWR) in a mountain forest area of Slovakia (Central Europe). Findings of previous studies suggest that the variability of SWR is associated mainly with differences in soil moisture. On the other hand, the role of soil organic matter (SOM) quality in spatial and/or temporal WR changes is less clear, particularly at the plot scale. To measure SOM quality, we used Fourier-transform infrared (FTIR) spectroscopy and thermogravimetry (TG). It was found that FTIR data and the results of thermal analysis are linked to dissimilar wettability of the studied soils. WR samples contained more aliphatic structural units in comparison to wettable soils, which showed a higher relative amount of polar functional groups. Thermogravimetric data suggest that SOM in all 45 samples is relatively labile. This is in accordance with strongly acidic pH and high C/N ratio. The amount of SOM degraded at around 250 °C was significantly correlated with SWR data and at the same time with FTIR peak areas characteristic for aliphatic structural units. This suggests that the accumulation of raw (labile) OM, containing nonpolar functional groups, supports the susceptibility of soils to WR. A significant portion of the variability in WR data was explained by multiple regression analysis, using field water content, FTIR peak areas, and SOM thermal characteristics as predictors. The results confirmed that even the soils occurring in a relatively humid and cold climate may show considerable WR during summer. Full article
(This article belongs to the Section Environmental Sciences)
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Figure 1

Figure 1
<p>Location of three experimental sites (<b>T1</b>, <b>T2</b>, and <b>T3</b>) where 45 topsoil samples were taken. Photographs on the right display the conditions at the three sites two years after the windstorm.</p>
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<p>Illustration of peak area integration in 8 infrared bands.</p>
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<p>Scatter plots showing general collinearity between SWR data and FTIR A/B ratio. The term A represents the sum of the peak areas integrated within the band Nos. 1, 5, and 7 (<a href="#applsci-13-00216-t001" class="html-table">Table 1</a>) and sum of the peak areas associated with 5 remaining bands (Nos. 2–4 and 6–8 in <a href="#applsci-13-00216-t001" class="html-table">Table 1</a>) are represented by B.</p>
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<p>Two grids showing general trend in MED value change as a result of soil moisture (w<sub>F</sub>), FTIR A/B ratio, and soil pH variation. In each of the two graphs, a fixed pH value is used for the prediction (3.21 in the upper and 4.08 in the lower panel; these represent the lowest and the highest detected pH values among 45 topsoil samples). Used regression equation: MED = −2.93 Log w<sub>F</sub> + 0.35 (A/B)–1.46 pH + 10.43 (R<sup>2</sup> = 0.71, F = 33.39, <span class="html-italic">p</span> = 2.51 10<sup>−21</sup>, d.f = 41).</p>
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<p>Correlations (Pearson’s) between FTIR peak areas and the rate of weight loss (DTG) recorded in 150 and 500 °C interval (0.29; 0.38; 0.47 values correspond to <span class="html-italic">p</span> &lt; 0.05; 0.01; and 0.001 significance level).</p>
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<p>Correlation (Pearson’s) between SWR data and mass portions of SOM degraded/volatilized per 10 °C interval (0.29; 0.38; 0.47 values correspond to <span class="html-italic">p</span> &lt; 0.05; 0.01; and 0.001 significance level).</p>
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14 pages, 3576 KiB  
Article
Proteomic Comparison of Ivermectin Sensitive and Resistant Staphylococcus aureus Clinical Isolates Reveals Key Efflux Pumps as Possible Resistance Determinants
by Shoaib Ashraf, Débora Parrine, Muhammad Bilal, Umer Chaudhry, Mark Lefsrud and Xin Zhao
Antibiotics 2022, 11(6), 759; https://doi.org/10.3390/antibiotics11060759 - 2 Jun 2022
Cited by 3 | Viewed by 4298
Abstract
Ivermectin (IVM) is a versatile drug used against many microorganisms. Staphylococcus aureus is one of the most devastating microorganisms. IVM sensitive and resistant S. aureus strains were recently reported. However, the underlying molecular mechanisms of resistance are unknown. Clinical isolates of S. [...] Read more.
Ivermectin (IVM) is a versatile drug used against many microorganisms. Staphylococcus aureus is one of the most devastating microorganisms. IVM sensitive and resistant S. aureus strains were recently reported. However, the underlying molecular mechanisms of resistance are unknown. Clinical isolates of S. aureus were used for determination of the sensitivities against IVM by growth curve analysis and time-kill kinetics. Then, proteomic, and biochemical approaches were applied to investigate the possible mechanisms of resistance. Proteomic results showed a total of 1849 proteins in the dataset for both strains, 425 unique proteins in strain O9 (IVM sensitive), and 354 unique proteins in strain O20 (IVM resistant). Eight proteins with transport functions were differentially expressed in the IVM resistant strain. Among them, three efflux pumps (mepA, emrB, and swrC) were confirmed by qPCR. The IVM resistant S. aureus may overexpress these proteins as a key resistance determinant. Further experiments are required to confirm the exact mechanistic relationship. Nevertheless, the possibility of blocking these transporters to reverse or delay the onset of resistance and reduce selection pressure is potentially appealing. Full article
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Figure 1
<p>Growth curves and time-kill kinetics for O20 (<b>A</b>,<b>C</b>) and O9 (<b>B</b>,<b>D</b>) strains, respectively, in the presence of ivermectin. The control did not contain ivermectin or DMSO. The error bars are standard error mean for three independent experiments, each having three technical replicates, <span class="html-italic">n</span> = 9.</p>
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<p>Experimental workflow of the proteomic analysis showing the steps for sample preparation, quantification by LC-MS/MS (MudPIT) and bioinformatics. The susceptible strain O9 was compared to the resistant strain O20 by label-free quantitation (emPAI).</p>
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<p>Distribution of the differently abundant and unique proteins found in strains O9 and O20. Number of proteins found in strain O20 that are unique, upregulated, downregulated, and in total (accounting for unchanged expression) in both strains O9 and O20 (<b>A</b>). The Venn diagram of proteins identified uniquely in strains O9 and O20, and in both (<b>B</b>).</p>
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<p>Graphs of the functional annotation of all proteins identified in strain O20 (<b>A</b>) and strain O9 (<b>B</b>). Functions of deferentially expressed proteins in O20 vs. O9 strain (<b>C</b>). GO terms assigned are associated with molecular function from UNIPROT-GOA. Metal and nucleotide-binding proteins are a subdivision of catalytic activity.</p>
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<p>Protein interaction networks of differently expressed proteins in strain O20 versus O9. Protein accessions were mapped to gene names, their interactions are shown in the networks of upregulated proteins presented as five clusters, with cluster 1 containing proteins related to cytoplasmic translation. Cluster 2–5 have de novo IMP biosynthetic process, ATP synthesis, ligase activity, unfolded protein binding functions, respectively. (<b>A</b>) and downregulated genes, cluster 1 is the significant cluster containing proteins with the nucleic acid binding function (<b>B</b>). Only high confidence (minimum score 0.7) interactions are shown. Edges color scheme: gene neighborhood, green; gene fusions, red; co-occurrence, dark blue, co-expression, black; homology, light violet; data from curated databases, light blue, data experimentally determined, pink.</p>
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<p>Heatmap depicting protein abundance after unsupervised hierarchical clustering of the data from <span class="html-italic">S. aureus</span> strains O9 and O20 containing the proteins normalized by rank from 0 to 1. An interactive version of this heatmap can be accessed in the <a href="#app1-antibiotics-11-00759" class="html-app">Supplementary Materials</a> (Heatmap_SA.html).</p>
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<p>Expression of <span class="html-italic">mepA</span>, <span class="html-italic">swrC</span> and <span class="html-italic">emrB</span> mRNA in <span class="html-italic">Staphylococcus aureus</span> O9 and O20 bacterial strains. * Mean significant differences between groups (Unpaired <span class="html-italic">t</span>-test, * = <span class="html-italic">p</span> &lt; 0.05, ** = <span class="html-italic">p</span> &lt; 0.01, *** = <span class="html-italic">p</span> &lt; 0.001) and bars represent Means ± SEM (<span class="html-italic">n</span> = 3).</p>
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15 pages, 1626 KiB  
Article
Soil Water Retention as Affected by Management Induced Changes of Soil Organic Carbon: Analysis of Long-Term Experiments in Europe
by Ioanna S. Panagea, Antonio Berti, Pavel Čermak, Jan Diels, Annemie Elsen, Helena Kusá, Ilaria Piccoli, Jean Poesen, Chris Stoate, Mia Tits, Zoltan Toth and Guido Wyseure
Land 2021, 10(12), 1362; https://doi.org/10.3390/land10121362 - 9 Dec 2021
Cited by 35 | Viewed by 7827
Abstract
Soil water retention (SWR) is an important soil property related to soil structure, texture, and organic matter (SOM), among other properties. Agricultural management practices affect some of these properties in an interdependent way. In this study, the impact of management-induced changes of soil [...] Read more.
Soil water retention (SWR) is an important soil property related to soil structure, texture, and organic matter (SOM), among other properties. Agricultural management practices affect some of these properties in an interdependent way. In this study, the impact of management-induced changes of soil organic carbon (SOC) on SWR is evaluated in five long-term experiments in Europe (running from 8 up to 54 years when samples were taken). Topsoil samples (0–15 cm) were collected and analysed to evaluate the effects of three different management categories, i.e., soil tillage, the addition of exogenous organic materials, the incorporation of crop residues affecting SOC and water content under a range of matric potentials. Changes in the total SOC up to 10 g C kg−1 soil (1%) observed for the different management practices, do not cause statistically significant differences in the SWR characteristics as expected. The direct impact of the SOC on SWR is consistent but negligible, whereas the indirect impact of SOC in the higher matric potentials, which are mainly affected by soil structure and aggregate composition, prevails. The different water content responses under the various matric potentials to SOC changes for each management group implies that one conservation measure alone has a limited effect on SWR and only a combination of several practices that lead to better soil structure, such as reduced soil disturbances combined with increased SOM inputs can lead to better water holding capacity of the soil. Full article
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<p>SOC content in the topsoil (0–15 cm) for each study site (see also <a href="#land-10-01362-t001" class="html-table">Table 1</a> for the codes and <a href="#land-10-01362-t002" class="html-table">Table 2</a> for a description of the soil improving treatments). Error bars represent the standard error (n -number of treatments replications- is denoted in <a href="#land-10-01362-t003" class="html-table">Table 3</a> for each experiment).</p>
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<p>Soil water content at the different pressure points for each study site (see also <a href="#land-10-01362-t001" class="html-table">Table 1</a> for the codes and <a href="#land-10-01362-t002" class="html-table">Table 2</a> for a description of the soil improving treatments). Error bars represent the standard error (n -number of treatments replications- is denoted in <a href="#land-10-01362-t003" class="html-table">Table 3</a> for each experiment).</p>
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<p>Relationship of the percentage change in soil water content and percentage change in SOC content. The water content and SOC values represent the percentage differences between the different treatments’ plots and the control plot of each block of the experiment. The different colours represent the water content change in the different pressure points of the WRC. (<b>a</b>): All the experiments plotted together. (<b>b</b>–<b>d</b>): Each experimental group plotted separately (<b>b</b>): addition of compost or manure, (<b>c</b>): tillage experiments, (<b>d</b>): residue management).</p>
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12 pages, 2350 KiB  
Article
Efficiency of High-Frequency Pressing of Spruce Laminated Timber Bonded with Casein Adhesives
by Andreas Herzog, Tobias Kerschbaumer, Ronald Schwarzenbrunner, Marius-Cătălin Barbu, Alexander Petutschnigg and Eugenia Mariana Tudor
Polymers 2021, 13(23), 4237; https://doi.org/10.3390/polym13234237 - 3 Dec 2021
Cited by 6 | Viewed by 3015
Abstract
This study identifies the importance of reducing press times by employing high-frequency pressing of spruce-laminated timber bound with sustainable casein adhesives. Spruce lamellas with dimensions of 12 × 10 × 75 cm were bonded into five-layered laminated timber and then separated into single-layer [...] Read more.
This study identifies the importance of reducing press times by employing high-frequency pressing of spruce-laminated timber bound with sustainable casein adhesives. Spruce lamellas with dimensions of 12 × 10 × 75 cm were bonded into five-layered laminated timber and then separated into single-layer solid wood panels. Three types of casein (acid casein from two sources and rennin) were used. To compare the effectiveness of the casein formulation, two control samples bonded with polyvinyl acetate (PVAc) adhesive were pressed at room temperature (20 °C) and also with high-frequency equipment. The tests included compression shear strength, modulus of rupture, modulus of elasticity and screw withdrawal resistance on the wood panel surface and in the glue line. The average values of casein-bonded samples compression strengths ranged from 1.16 N/mm2 and 2.28 N/mm2, for modulus of rupture (MOR) were measured 85 N/mm2 to 101 N/mm2 and for modulus of elasticity (MOE) 12,200 N/mm2 to 14,300 N/mm2. The screw withdrawal resistance (SWR) on the surface of the wood panels ranged from 91 N/mm to 117 N/mm and in the adhesive line from 91 N/mm to 118 N/mm. Control samples bonded with PVAc adhesive did not perform better for compression shear strength, MOR and MOE, but for SWR in the adhesive line with 114 N/mm. Casein-bonded spruce timber pressed with HF equipment represents a sustainable new product with reduced press times, hazardous emissions and improved workability. Full article
(This article belongs to the Collection Wood Composites)
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Graphical abstract

Graphical abstract
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<p>Three types of casein used in this study (left = acid-casein of Kremer Pigmente Co., middle = acid-casein of Woerle Co., right = rennin of Woerle Co.</p>
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<p>Schematic representation of a single-layer solid wood panel production in a block process from laminated timber.</p>
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<p>High-frequency press used by Weinig Dimter Co. (Profipress L2 2500 HF, type PPL2-2500) as trial equipment at its research center in Illertissen, Germany.</p>
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<p>Temperature measurement in the adhesive line during high-frequency pressing by means of a thermal imaging camera (Flir E8) (<b>A</b>). Casein glued bonded 5-layer laminated timber block, just after high-frequency pressing (<b>B</b>).</p>
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<p>Production of the spruce laminated timber blocks (5 × 20 × 120 × 750 mm) in the cold process before pressing.</p>
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<p>Shear strength test of the single-layer solid spruce laminated timber.</p>
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24 pages, 3793 KiB  
Article
Thermal Evaluation of a Micro-Coaxial Antenna Set to Treat Bone Tumors: Design, Parametric FEM Modeling and Evaluation in Multilayer Phantom and Ex Vivo Porcine Tissue
by Texar Javier Ramírez-Guzmán, Citlalli Jessica Trujillo-Romero, Raquel Martínez-Valdez, Lorenzo Leija-Salas, Arturo Vera-Hernández, Genaro Rico-Martínez, Rocío Ortega-Palacios and Josefina Gutiérrez-Martínez
Electronics 2021, 10(18), 2289; https://doi.org/10.3390/electronics10182289 - 17 Sep 2021
Cited by 9 | Viewed by 2835
Abstract
Bone cancer is rare in adults, the most affected persons by this disease are young people and children. The common treatments for bone cancer are surgery, chemotherapy, and targeted therapies; however, all of them have side-effects that decrease the patient’s quality of life. [...] Read more.
Bone cancer is rare in adults, the most affected persons by this disease are young people and children. The common treatments for bone cancer are surgery, chemotherapy, and targeted therapies; however, all of them have side-effects that decrease the patient’s quality of life. Thermotherapy is one of the most promising treatments for bone cancer; its main goal is to increase the tumor temperature to kill cancerous cells. Although some micro-coaxial antennas have been used to treat bone tumors, most of them are designed to treat soft tissue. Therefore, the purpose of this work is to analyze the thermal behavior of four micro-coaxial antennas specifically designed to generate thermal ablation in bone tissue to treat bone tumors, at 2.45 GHz. The proposed antennas were the metal-tip monopole (MTM), the choked metal-tip monopole (CMTM), the double slot (DS) and the choked double slot (CDS). The design and optimization of the antennas by using the Finite Element Method (FEM) allow to predict the optimal antenna dimensions and their performance when they are in contact with the affected biological tissues (bone, muscle, and fat). In the FEM model, a maximum power transmission was selected as the main parameter to choose the optimum antenna design, i.e., a Standing Wave Ratio (SWR) value around 1.2–1.5. The four optimized antennas were constructed and experimentally evaluated. The evaluation was carried out in multilayer phantoms (fat, muscle, cortical, and cancellous bone) and ex vivo porcine tissue at different insertion depths of the antennas. To fully evaluate the antennas performance, the standing wave ratio (SWR), power loss, temperature profiles, and thermal distributions were analyzed. In the experimentation, the four antennas were able to reach ablation temperatures (>60 °C) and the highest reached SWR was 1.7; the MTM (power loss around 16%) and the CDS (power loss around 6.4%) antennas presented the lowest SWR values depending on the antenna insertion depth, either in multilayer tissue phantom or in ex vivo tissue. These proposed antennas allow to obtain ablation temperatures with an input power of 5 W after 5 min of treatment; these values are lower than the ones reported in the literature. Full article
(This article belongs to the Special Issue Numerical Methods and Measurements in Antennas and Propagation)
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Figure 1
<p>Axi-symmetric geometry of the micro-coaxial antennas. (<b>a</b>) micro—coaxial cable transversal view and its diameters. (<b>b</b>) Metal—tip monopole (MTM) antenna, (<b>c</b>) Choked metal—tip monopole (CMTM) antenna, (<b>d</b>) Double slot (DS) antenna and (<b>e</b>) choked double slot (CDS) antenna, (<b>f</b>) Antenna inserted in a multilayer tissue model to evaluate its performance.</p>
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<p>Experimental set-up to evaluate the antenna performance. (<b>a</b>) Experimental setup to measure the SWR of the antennas inserted in the multilayer phantom and the <span class="html-italic">ex vivo</span> porcine tissue, (<b>b</b>) Radiation and thermometry system used in the experimental tests, (<b>c</b>) Temperature sensors location (S1, S2, S3, and S4) to measure the temperature generated for the antennas.</p>
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<p>Experimental set-up used to record the temperature increase in the multilayer phantoms and the <span class="html-italic">ex vivo</span> porcine tissue. (<b>a</b>) Experimental set-up used to take the thermal distributions by the thermal camera, (<b>b</b>) Experimental set-up to perform the experimentation in a multilayer tissue phantom, (<b>c</b>) Experimental Set-up to perform the experimentation in <span class="html-italic">ex vivo</span> tissue.</p>
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<p>Directivity diagrams for the designed antennas. (<b>a</b>) Double Slot antenna, (<b>b</b>) Chocked Double Slot antenna, (<b>c</b>) Metal-Tip Monopole antenna, (<b>d</b>) Chocked Double Slot antenna, obtained by using COMSOL-Multiphysics.</p>
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<p>Micro-coaxial antennas. (<b>a</b>) Metal-Tip Monopole antenna, (<b>b</b>) Chocked Metal-Tip Monopole antenna, (<b>c</b>) Double Slot antenna, (<b>d</b>) Chocked Double Slot antenna, (<b>e</b>) Chocked Double Slot antenna tested in porcine <span class="html-italic">ex vivo</span> tissue and (<b>f</b>) Metal-Tip Monopole antenna tested in porcine <span class="html-italic">ex vivo</span> tissue.</p>
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<p>Temperature profiles reached by each antenna during the experiments. (<b>a</b>) Comparison between the MTM and the CMTM antennas fed with 5 W, (<b>b</b>) Comparison between the MTM and the CMTM antennas fed with 10 W, (<b>c</b>) Comparison between the DS and the CDS antennas fed with 5 W, (<b>d</b>) Comparison between the DS and the CDS antennas fed with 10 W.</p>
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<p>Experimental thermal distributions generated by each antenna through 5 min of radiation (<b>a</b>) Thermal distributions generated by the MTM antenna., (<b>b</b>) Thermal distributions generated by the CMTM antenna, (<b>c</b>) Thermal distributions generated by the DS antenna, (<b>d</b>) Thermal distributions generated by the CDS antenna through the 5 min.</p>
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<p>Thermal distribution generated by an MTM and CDS antenna in porcine <span class="html-italic">ex vivo</span> tissue.</p>
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<p>Temperatures reached by each antenna during the experiments in porcine <span class="html-italic">ex vivo</span> tissue. (<b>a</b>) Temperature profiles reached with 5 W, (<b>b</b>) Temperature profiles reached with 10 W.</p>
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