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22 pages, 5683 KiB  
Article
Co-Registration of Multi-Modal UAS Pushbroom Imaging Spectroscopy and RGB Imagery Using Optical Flow
by Ryan S. Haynes, Arko Lucieer, Darren Turner and Emiliano Cimoli
Drones 2025, 9(2), 132; https://doi.org/10.3390/drones9020132 - 11 Feb 2025
Abstract
Remote sensing from unoccupied aerial systems (UASs) has witnessed exponential growth. The increasing use of imaging spectroscopy sensors and RGB cameras on UAS platforms demands accurate, cross-comparable multi-sensor data. Inherent errors during image capture or processing can introduce spatial offsets, diminishing spatial accuracy [...] Read more.
Remote sensing from unoccupied aerial systems (UASs) has witnessed exponential growth. The increasing use of imaging spectroscopy sensors and RGB cameras on UAS platforms demands accurate, cross-comparable multi-sensor data. Inherent errors during image capture or processing can introduce spatial offsets, diminishing spatial accuracy and hindering cross-comparison and change detection analysis. To address this, we demonstrate the use of an optical flow algorithm, eFOLKI, for co-registering imagery from two pushbroom imaging spectroscopy sensors (VNIR and NIR/SWIR) to an RGB orthomosaic. Our study focuses on two ecologically diverse vegetative sites in Tasmania, Australia. Both sites are structurally complex, posing challenging datasets for co-registration algorithms with initial georectification spatial errors of up to 9 m planimetrically. The optical flow co-registration significantly improved the spatial accuracy of the imaging spectroscopy relative to the RGB orthomosaic. After co-registration, spatial alignment errors were greatly improved, with RMSE and MAE values of less than 13 cm for the higher-spatial-resolution dataset and less than 33 cm for the lower resolution dataset, corresponding to only 2–4 pixels in both cases. These results demonstrate the efficacy of optical flow co-registration in reducing spatial discrepancies between multi-sensor UAS datasets, enhancing accuracy and alignment to enable robust environmental monitoring. Full article
17 pages, 3095 KiB  
Article
Effects of Different Earthworms on Calcium Speciation and Base Cation Release in Terra Rossa Soil: A Case Study from South China
by Jialong Wu, Chi Zhang, Menghao Zhang, Ting Deng, Mikael Motelica-Heino, Hesen Zhong, Christian Défarge, Yingmei Huang, Changchao Xu and Juntao Zhang
Forests 2025, 16(2), 312; https://doi.org/10.3390/f16020312 - 11 Feb 2025
Viewed by 221
Abstract
Soil calcium is a vital component in plant growth and soil health. Earthworm activities impact metal distribution and speciation a lot by changing soil pH. Nevertheless, little is known about how ecological earthworm species, particularly in Terra Rossa soil, affect soil Ca speciation [...] Read more.
Soil calcium is a vital component in plant growth and soil health. Earthworm activities impact metal distribution and speciation a lot by changing soil pH. Nevertheless, little is known about how ecological earthworm species, particularly in Terra Rossa soil, affect soil Ca speciation distribution. This research examined the effects of the activities of four different earthworm species (epigeic species Eisenia fetida (noted as EF), endogeic species Amynthas robustus (noted as AR) and Pontoscolex corethrurus (noted as PC), anecic species Amynthas aspergillum (noted as AA)) on Ca speciations (water-soluble (CaWs), exchangeable (CaEx), acid-soluble bound (CaAc), organic-bound (CaOr), and residual (CaRe)), soil pH, the release contents of exchangeable cations (Ca, Mg, K, and Na), total calcium (CaTotal) contents, total nitrogen (TN) contents, soil organic carbon (SOC) concentrations, cation-exchange capacity (CEC), and NIRS spectral characteristics in Terra Rossa soil for 40 days under lab conditions. In contrast to control soil, 108.3%, 158.3%, 91.7%, and 125.0% of CaWs contents in casts and 116.6%, 108.3%, 58.3% and 91.6% of CaWs in uningested soil increased significantly with the inoculation of EF, PC, AR, and AA, respectively. In addition, compared with control, for casts, the contents of exchangeable Ca, Mg, K, CEC, and available-K were significantly increased in the presence of EF, PC, AR, and AA, respectively. In the casts of EF, PC, AR, and AA, soil pH values declined by 0.72, 0.80, 0.45, and 0.60 units relative to control soil, while they decreased by 0.65, 0.84, 0.34, and 0.59 units in uningested soil. The soil inoculated with PC had higher soil pH values and CaWs contents than those with the other three earthworm species. Principal component analysis revealed significant differences in soil pH, Ca speciation, NIR spectra, and exchangeable base cation release between casts and uningested soil in treatments with EF, PC, AR, and AA inoculation. These findings expand, for the first time, to the ecological functions of earthworm species, especially for PC, demonstrating a capacity to alter soil Ca speciation, decrease soil pH, affect the exchangeable base cations’ release, and participate in and regulate the geochemical circulation processes in limestone regions. Full article
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<p>ES: soil + <span class="html-italic">E. fetida</span>; PS: soil + <span class="html-italic">P. corethrurus</span>; RS: soil + <span class="html-italic">A. robustus</span>; AS: soil + <span class="html-italic">A. aspergillum</span>. (<b>a</b>) Surface casts production; (<b>b</b>) internal casts production; (<b>c</b>) total casts production; (<b>d</b>) ingestion rate. n = 5. Cast production and ingestion rate for different earthworms. Different lowercase letters indicate that there were significant differences in the cast production and ingestion rates of four earthworms (n = 5, <span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Soil pH values in soils affected by different earthworms. Different capital letters indicated that there were significant differences in the cast group. Different lowercase letters indicated that there were significant differences in the uningested soil group (n = 5, <span class="html-italic">p</span> &lt; 0.05). (**) <span class="html-italic">p</span> &lt; 0.01 relate to the significant differences between casts and the uningested soil group of the <span class="html-italic">T</span> test, respectively.</p>
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<p>PCA analysis of NIRS spectra in casts and uningested soils. (<b>a</b>) Projection of NIR spectra in soils; (<b>b</b>) sore plots in soils. n = 4.</p>
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<p>The percentage of five speciations of Ca in casts and the uningested soil of four earthworm species (n = 5). CS: control soil; ESC: cast of EF; PSC: cast of PC; RSC: cast of AR; ASC: cast of AA; ESU: uningested soil of EF; PSU: uningested soil of PC; RSU: uningested soil of AR; ASU: uningested soil of AA.</p>
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<p>PCA analysis of five Ca speciations in soils: (<b>a</b>) projection of variables; (<b>b</b>) sore plots in soils. n = 5.</p>
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<p>Projection of soil Ca speciations, exchangeable K, Na, Ca, Mg contents, etc., in casts and uningested soils by PCA analysis. (<b>a</b>) Projection of variables; (<b>b</b>) sore plots in soils. n = 5.</p>
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<p>Correlation analysis between soil Ca speciations and exchangeable K, Na, Ca, Mg contents, etc., in casts and uningested soil. n = 5. (***) <span class="html-italic">p</span> &lt; 0.001, (**) <span class="html-italic">p</span> &lt; 0.01, (*) <span class="html-italic">p</span> &lt; 0.05 relate to the significant differences between corresponding soil indicators in a <span class="html-italic">T</span> test, respectively.</p>
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37 pages, 632 KiB  
Review
The Development of Optical Sensing Techniques as Digital Tools to Predict the Sensory Quality of Red Meat: A Review
by Georgios Anagnostou, Alessandro Ferragina, Emily C. Crofton, Jesus Maria Frias Celayeta and Ruth M. Hamill
Appl. Sci. 2025, 15(4), 1719; https://doi.org/10.3390/app15041719 - 8 Feb 2025
Viewed by 225
Abstract
The sensory quality of meat, encompassing the traits of appearance, texture, and flavour, is essential to consumer acceptance. Conventional quality assessment techniques, such as instrumental methods and trained sensory panels, often face limitations due to their destructive and time-consuming nature. In recent years, [...] Read more.
The sensory quality of meat, encompassing the traits of appearance, texture, and flavour, is essential to consumer acceptance. Conventional quality assessment techniques, such as instrumental methods and trained sensory panels, often face limitations due to their destructive and time-consuming nature. In recent years, optical sensing techniques have emerged as a fast, non-invasive, and non-destructive technique for the prediction of quality attributes in meat and meat products, achieving prediction accuracies of over 90%. This review critically examines the potential of optical sensing techniques, such as near-infrared spectroscopy (NIRS), Raman spectroscopy, and hyperspectral imaging (HSI), to inform about the sensory attributes of red meat, aligning with industrial demands for early information on the predicted sensory performance of inventory to support meeting consumer requirements. Recent trends and the remaining challenges associated with these techniques will be described. While technical issues related to spectral data acquisition and data processing are important challenges when considering industrial implementation, overall, optical sensing techniques, in tandem with recent developments in digitalisation and data analytics, provide potential for the online prediction of meat sensory quality in the meat processing industries. Establishing technologies for enhanced information on the product and improved possibilities for quality control will help the industry to meet consumer demands for a consistent quality of product. Full article
19 pages, 2272 KiB  
Article
Integrating Fusion Strategies and Calibration Transfer Models to Detect Total Nitrogen of Soil Using Vis-NIR Spectroscopy
by Zhengyu Tao, Anan Tao, Yi Lu, Xiaolong Li, Fei Liu and Wenwen Kong
Chemosensors 2025, 13(2), 57; https://doi.org/10.3390/chemosensors13020057 - 7 Feb 2025
Viewed by 273
Abstract
Visible near-infrared (Vis-NIR) spectroscopy is widely used for rapid soil element detection, but calibration models are often limited by instrument-specific constraints, including varying laboratory conditions and sensor configurations. To address this, we propose a novel calibration transfer method that eliminates the conventional requirement [...] Read more.
Visible near-infrared (Vis-NIR) spectroscopy is widely used for rapid soil element detection, but calibration models are often limited by instrument-specific constraints, including varying laboratory conditions and sensor configurations. To address this, we propose a novel calibration transfer method that eliminates the conventional requirement of designating ‘master’ and ‘slave’ devices. Instead, spectral data from two spectrometers are fused to create a master spectrum, while independent spectral data serve as slave spectra. We developed an ensemble stacking model, incorporating partial least squares regression (PLSR), support vector regression (SVR), and ridge regression (Ridge) in the first layer, with BoostForest (BF) as the second layer, trained on the fused master spectrum. This model was further integrated with three calibration transfer methods: direct standardization (DS), piecewise direct standardization (PDS), and spectral space transfer (SST), to enable seamless application across slave spectra. Applied to soil total nitrogen (TN) detection, the method achieved an R2P of 0.842, RMSEP of 0.017, and RPD of 2.544 on the first slave spectrometer, and an R2P of 0.830, RMSEP of 0.018, and RPD of 2.452 on the second. These results demonstrate the method’s ability to simplify calibration processes while enhancing cross-instrument prediction accuracy, supporting robust and generalizable cross-instrument applications. Full article
(This article belongs to the Special Issue Advancements of Chemical and Biosensors in China—2nd Edition)
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<p>The structure of our ensemble stacking model.</p>
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<p>Comparison flowchart depicting the standard calibration transfer method versus our novel approach. In the two spectra, the same color of the spectral lines means that they are from the same sample. The higher-resolution spectra are provided in the <a href="#app1-chemosensors-13-00057" class="html-app">Supplementary Materials</a>.</p>
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<p>The PCA chart of spectra from two spectrometers.</p>
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<p>Average spectral correlation coefficients between the master (M) spectral prediction set and the raw, DS, PDS, SST transformed slave (S) spectral prediction set.</p>
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<p>The prediction performance of the models on the (<b>a</b>) master’s calibration set, and the slave prediction sets after (<b>b</b>) DS, (<b>c</b>) PDS, and (<b>d</b>) SST transformations.</p>
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18 pages, 13888 KiB  
Article
A Personalized Multimodal BCI–Soft Robotics System for Rehabilitating Upper Limb Function in Chronic Stroke Patients
by Brian Premchand, Zhuo Zhang, Kai Keng Ang, Juanhong Yu, Isaac Okumura Tan, Josephine Pei Wen Lam, Anna Xin Yi Choo, Ananda Sidarta, Patrick Wai Hang Kwong and Lau Ha Chloe Chung
Biomimetics 2025, 10(2), 94; https://doi.org/10.3390/biomimetics10020094 - 7 Feb 2025
Viewed by 480
Abstract
Multimodal brain–computer interfaces (BCIs) that combine electrical features from electroencephalography (EEG) and hemodynamic features from functional near-infrared spectroscopy (fNIRS) have the potential to improve performance. In this paper, we propose a multimodal EEG- and fNIRS-based BCI system with soft robotic (BCI-SR) components for [...] Read more.
Multimodal brain–computer interfaces (BCIs) that combine electrical features from electroencephalography (EEG) and hemodynamic features from functional near-infrared spectroscopy (fNIRS) have the potential to improve performance. In this paper, we propose a multimodal EEG- and fNIRS-based BCI system with soft robotic (BCI-SR) components for personalized stroke rehabilitation. We propose a novel method of personalizing rehabilitation by aligning each patient’s specific abilities with the treatment options available. We collected 160 single trials of motor imagery using the multimodal BCI from 10 healthy participants. We identified a confounding effect of respiration in the fNIRS signal data collected. Hence, we propose to incorporate a breathing sensor to synchronize motor imagery (MI) cues with the participant’s respiratory cycle. We found that implementing this respiration synchronization (RS) resulted in less dispersed readings of oxyhemoglobin (HbO). We then conducted a clinical trial on the personalized multimodal BCI-SR for stroke rehabilitation. Four chronic stroke patients were recruited to undergo 6 weeks of rehabilitation, three times per week, whereby the primary outcome was measured using upper-extremity Fugl-Meyer Motor Assessment (FMA) and Action Research Arm Test (ARAT) scores on weeks 0, 6, and 12. The results showed a striking coherence in the activation patterns in EEG and fNIRS across all patients. In addition, FMA and ARAT scores were significantly improved on week 12 relative to the pre-trial baseline, with mean gains of 8.75 ± 1.84 and 5.25 ± 2.17, respectively (mean ± SEM). These improvements were all better than the Standard Arm Therapy and BCI-SR group when retrospectively compared to previous clinical trials. These results suggest that personalizing the rehabilitation treatment leads to improved BCI performance compared to standard BCI-SR, and synchronizing motor imagery cues to respiration increased the consistency of HbO levels, leading to better motor imagery performance. These results showed that the proposed multimodal BCI-SR holds promise to better engage stroke patients and promote neuroplasticity for better motor improvements. Full article
(This article belongs to the Special Issue Advances in Brain–Computer Interfaces)
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<p>Overview of the experimental setup.</p>
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<p>Soft robotic glove module of mBCI-SR system. (<b>A</b>) Participant operating the soft robotic glove via motor imagery; (<b>B</b>) soft robotic glove and thermoset thumb splint; (<b>C</b>) two different modes (flexion, extension) of the bidirectional actuator.</p>
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<p>Timelines of motor imagery (MI) trials, not to scale. ITI—inter-trial interval. B, B1, and B2 are baseline segments used for data analysis, explained in the next section. (<b>A</b>) In conventional MI experiments, trial timings are not synchronized with the participant’s respiration. After a 2 s preparation period (light gray), a cue is delivered for 10 s (blue), during which participants are instructed to perform MI. Subsequently, there is a 10 s inter-trial interval (ITI) before the next trial (dark gray). (<b>B</b>) In our proposed BCI system, the cue to begin MI is only delivered when inhalation is detected after the preparation period. In this example, there is a wait of <span class="html-italic">x</span> seconds (yellow).</p>
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<p>Comparison of topographic brain maps derived from fNIRS GLM analysis and EEG FBCSP approach for the 4 patients’ data. (<b>A</b>–<b>D</b>): Brain maps derived from HbO data. (<b>E</b>–<b>H</b>): Brain maps derived from EEG FBCSP data. Each column represents data from the same patient.</p>
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<p>Plot of HbO values for stroke patient No. 3 in the clinical trial. In the left column subplots, each horizontal line in the heatmap represents one trial, with HbO levels quantified by color (measured in units of 10<sup>−7</sup> mol/L). The subplots in the right column depict the evoked plot, illustrating the average of all 80 trials to present a group effect. (<b>A</b>) Eighty randomly selected epochs, indicating how HbO signals look like when not synchronized with any task-related or physiological signals. (<b>B</b>) Eighty epochs of HbO recordings, synchronized to the start of right-side motor imagery trials. (<b>C</b>) Eighty epochs of HbO recordings, synchronized to the inhalation phase of breathing during idle periods.</p>
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<p>The prediction accuracy of the fNIRS-HbO spatial–temporal estimator and the correlation between the dispersion index and prediction performance. (<b>A</b>) Prediction result for healthy group. (<b>B</b>) Prediction result for stroke patient group. The blue star on the bar plot shows that the prediction accuracy was significantly better than the chance level (one-tailed <span class="html-italic">t</span>-test, <span class="html-italic">α</span> = 0.005 after Bonferroni correction). (<b>C</b>) Scatter plot showing a negative correlation between prediction accuracy and dispersion index.</p>
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<p>FMA and ARAT scores of stroke patients before and after rehabilitation. (<b>A</b>) Changes in FMA scores with respect to the pre-trial baseline. The graph plots the mean change across all 4 patients, with error bars representing the standard error of the mean. The FMA scores on week 12 were significantly higher than the pre-trial scores (indicated by an asterisk, <span class="html-italic">p</span> &lt; 0.05, one-tailed paired <span class="html-italic">t</span>-test). (<b>B</b>) Changes in ARAT scores with respect to the pre-trial baseline. The graph plots the mean change across all 4 patients, with error bars representing the standard error of the mean. The ARAT scores on week 12 were significantly higher than the pre-trial scores (indicated by an asterisk, <span class="html-italic">p</span> &lt; 0.05, one-tailed paired <span class="html-italic">t</span>-test).</p>
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20 pages, 3542 KiB  
Article
NIR-Based Real-Time Monitoring of Freeze-Drying Processes: Application to Fault and Endpoint Detection
by Ambra Massei, Nunzia Falco and Davide Fissore
Processes 2025, 13(2), 452; https://doi.org/10.3390/pr13020452 - 7 Feb 2025
Viewed by 336
Abstract
In the pharmaceutical industry, freeze-drying is crucial for the stability of active pharmaceutical ingredients (APIs). Monitoring this complex process presents challenges as traditional methods often lack real-time insights, potentially leading to quality issues and batch rejections. Effective monitoring is then essential for optimizing [...] Read more.
In the pharmaceutical industry, freeze-drying is crucial for the stability of active pharmaceutical ingredients (APIs). Monitoring this complex process presents challenges as traditional methods often lack real-time insights, potentially leading to quality issues and batch rejections. Effective monitoring is then essential for optimizing process parameters and minimizing waste, thus saving costs and resources. This study evaluated the application of Near-Infrared (NIR) spectroscopy for the real-time monitoring of the freeze-drying process: NIR spectra were acquired in-line via a specially designed flange in the freeze-dryer. Two approaches were investigated. The first involved freeze-drying monitoring using control charts, thus creating a reference model based on cycles under normal conditions. A PCA model was developed using these reference cycles, and an intentional fault cycle was performed to test the system’s ability to detect deviations. Multivariate control charts, utilizing Hotelling’s T2 and DModX metrics, were shown to effectively monitor process deviations, enhancing the understanding of freeze-drying dynamics. The second approach was based on the use of NIR spectroscopy for assessing residual moisture during lyophilization. By integrating Partial Least Squares (PLS) regression with in-line NIR spectra, we estimated endpoints and detected faults in both reference and faulty cycles. The results showed strong correlations between PLS estimates and the Pirani–Baratron method, highlighting NIR’s applicability for monitoring drying phases. This research advocates for broader NIR implementation in pharmaceutical development, emphasizing its potential to monitor the process, ensure quality, and reduce out-of-specification product. Full article
(This article belongs to the Special Issue Application of Deep Learning in Pharmaceutical Manufacturing)
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<p>Set-up for in-line NIR spectroscopy in freeze-drying process. In figure (<b>a</b>), the installation of the NIR probe in the freeze-dryer chamber is shown, while in figure (<b>b</b>), the samples arrangement is shown.</p>
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<p>NIR spectra of a generic observation belonging to phase at different time instants: (<b>a</b>) freezing, (<b>b</b>) primary drying and (<b>c</b>) secondary drying. The signal of water is highlighted.</p>
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<p>Score plot relating the first two principal components of the NIR spectra acquired in-line during the freeze-drying process. Data were processed by PCA in the range 7400–4230 cm<sup>−1</sup>. The data are colored in black or grey for reference cycles 1 and 2, respectively.</p>
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<p>Hotelling’s T2 plot (<b>a</b>,<b>b</b>) and DModX weighted residual plot (<b>c</b>,<b>d</b>) as a function of observations in the case of reference cycles. In black, reference cycle 1 is reported (<b>a</b>,<b>c</b>), while in grey, reference cycle 2 (<b>b</b>,<b>d</b>).</p>
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<p>Hotelling’s T2 plot (<b>a</b>) and DModX weighted residual plot (<b>b</b>) as a function of observations in the case of fault cycle.</p>
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<p>Parity diagram plot relating the measured RM values by KF as a function of the RM predicted by PLS model.</p>
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<p>Graphs (<b>a</b>,<b>c</b>,<b>e</b>) depict the trend of residual moisture predicted by PLS model as a function of drying time in case of reference cycle 1, reference cycle 2 and fault cycle, respectively. In the graphs (<b>b</b>,<b>d</b>,<b>f</b>), the corresponding Pirani/Baratron ratio for the three cases is reported.</p>
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22 pages, 19510 KiB  
Article
The Role of Brown Algae as a Capping Agent in the Synthesis of ZnO Nanoparticles to Enhance the Antibacterial Activities of Cotton Fabrics
by Eli Rohaeti, Helmiyati, Rasamimanana Joronavalona, Paulina Taba, Dewi Sondari and Azlan Kamari
Mar. Drugs 2025, 23(2), 71; https://doi.org/10.3390/md23020071 - 7 Feb 2025
Viewed by 596
Abstract
Research was conducted on the role of brown algae as a capping agent in the synthesis of ZnO nanoparticles, the characteristics of ZnO nanoparticles, and the effect of the addition of ZnO nanoparticles and/or silane compounds on antibacterial and antifungal activities. The synthesis [...] Read more.
Research was conducted on the role of brown algae as a capping agent in the synthesis of ZnO nanoparticles, the characteristics of ZnO nanoparticles, and the effect of the addition of ZnO nanoparticles and/or silane compounds on antibacterial and antifungal activities. The synthesis of ZnO nanoparticles involved green synthesis, and then nanoparticles were characterized using UV/VIS/NIR, ATR-FTIR, XRD, PSA, and SEM-EDS, followed by the in situ deposition of ZnO nanoparticles on cotton fabrics and the addition of silane compounds. The characterization of modified and unmodified cotton fabrics and antibacterial and antifungal activity tests were carried out using the disc diffusion method through measurements of the diameter of the inhibition zone against Pseudomonas aeruginosa, Staphylococcus epidermidis, and Malassezia furfur. The characterization of ZnO nanoparticles showed absorption at a wavelength of 357 nm; the number of waves was 450 cm−1; the diffraction peak occurred at an angle of 36.14°; the crystal size was 15.35 nm; there was a heterogeneous particle distribution; the particle size was in the ranges of 1.74–706 nm (PSA) and 45–297 nm (SEM); and an irregular particle shape was noted. The results showed that the best antibacterial and antifungal activity was obtained in cotton + HDTMS + ZnO nanoparticles (K8) and cotton + ZnO nanoparticles+HDTMS/MTMS (K4). Full article
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<p>Green synthesis reaction scheme of ZnO nanoparticles.</p>
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<p>Comparison of the FTIR spectra of K0, K1, and ZnO nanoparticles.</p>
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<p>XRD diffractogram of ZnO nanoparticles compared with the COD Database 96-900-4180.</p>
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<p>XRD diffractogram of cotton fabric-deposited nanoparticles ZnO (K1).</p>
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<p>SEM image of ZnO nanoparticles with JEOL JSM-6510LA. Magnification: 50,000×.</p>
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<p>EDS results of ZnO nanoparticles.</p>
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<p>SEM image of cotton fabric with Phenom Pro X G6. Magnification: (<b>a</b>) 1000×; (<b>b</b>) 2000×; (<b>c</b>) 5000×.</p>
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<p>EDS region results for cotton fabric. Magnification: 5000×.</p>
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<p>SEM image of cotton fabric + ZnO nanoparticles (K1) with Axia ChemiSEM. Magnification: 1000×.</p>
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<p>EDS results of cotton fabric + nanoparticles ZnO (K1). Magnification: 1000×.</p>
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<p>SEM image of cotton fabric + nanoparticles ZnO + HDTMS/MTMS (K4) with Phenom ProX G6. Magnification: 1000×.</p>
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<p>EDS results for spot cotton fabric + nanoparticles ZnO + HDTMS/MTMS (K4). Magnification: 17,500×.</p>
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<p>Graph of the relationship between bacterial inhibition zone diameter and incubation time against <span class="html-italic">Pseudomonas aeruginosa</span>.</p>
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<p>Graph of the relationship between inhibition zone diameter and incubation time against <span class="html-italic">Staphylococcus epidermidis</span>.</p>
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<p>Relationship between the diameter of the inhibition zone and incubation time against <span class="html-italic">Malassezia furfur</span>.</p>
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14 pages, 3607 KiB  
Article
Self-Enhanced Near-Infrared Copper Nanoscale Electrochemiluminescence Probe for the Sensitive Detection of Ciprofloxacin in Foods
by Jie Wu, Yuanjie Qin, Xiaoxin Mei, Lin Cai, Wen Hao and Guozhen Fang
Foods 2025, 14(3), 538; https://doi.org/10.3390/foods14030538 - 6 Feb 2025
Viewed by 395
Abstract
Ciprofloxacin (CIP), a widely used broad-spectrum antibiotic, poses a serious threat to human health and environmental safety due to its residues. The complementary monomers molecularly imprinted electrochemiluminescence sensor (MIECLS) based on a polyvinylpyrrolidone-functionalized copper nanowires (CuNWs@PVP) luminescent probe was constructed for the ultra-sensitive [...] Read more.
Ciprofloxacin (CIP), a widely used broad-spectrum antibiotic, poses a serious threat to human health and environmental safety due to its residues. The complementary monomers molecularly imprinted electrochemiluminescence sensor (MIECLS) based on a polyvinylpyrrolidone-functionalized copper nanowires (CuNWs@PVP) luminescent probe was constructed for the ultra-sensitive detection of CIP. CuNWs with low cost and high conductivity exhibited near-infrared electrochemiluminescence (NIR ECL) properties, yet their self-aggregation and oxidation led to a weakened emission phenomenon. PVP with solvent affinity and large skeleton was in situ attached to CuNWs surface to avoid CuNWs sedimentation and aggregation, and self-enhanced ECL signals were achieved. The bifunctional monomers molecularly imprinted polymer (MIP) possessed complementary active centers that increased their affinity with CIP, enhancing the accurate and sensitive detection of the target substances. The linear range of CIP using MIECLS was 5.00 × 10−9–5.00 × 10−5 mol L−1 with a low limit of detection (LOD) of 2.59 × 10−9 mol L−1, while the recovery rates of CIP in the spiking recovery experiment were 84.39% to 92.48%. The combination of bifunctional monomer MIP and NIR copper-based nano-luminescent probe provides a new method for the detection of CIP in food. Full article
(This article belongs to the Special Issue Food Contaminants: Detection, Toxicity and Safety Risk Assessment)
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<p>The SEM images of CuNWs (<b>A</b>) and CuNWs@PVP (<b>B</b>); the TEM image of CuNWs@PVP (<b>C</b>); the SEM element mapping of CuNWs@PVP ((<b>D</b>–<b>F</b>), red signifies Cu, purple signifies C, and green signifies N); the SEM images before (<b>G</b>) and after (<b>H</b>) elution of MIP/CuNWs@PVP/GCE.</p>
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<p>ECL spectrum with voltage variation (<b>A</b>); ECL intensity under different wavelength filters (<b>B</b>); the Fourier transform infrared spectrum of CuNWs@PVP (<b>C</b>); MIP electropolymerization for 10 cycles (<b>D</b>).</p>
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<p>The ECL spectra (<b>A</b>), EIS curves (<b>D</b>), and CV curves (<b>G</b>) of different modified electrodes; the ECL spectra (<b>B</b>), EIS curves (<b>E</b>), and CV curves (<b>H</b>) of MIP/CuNWs@PVP/GCE; the ECL spectra (<b>C</b>), EIS curves (<b>F</b>), and CV curves (<b>I</b>) of NIP/CuNWs@PVP/GCE.</p>
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<p>Optimization of ratio between PVP and CuNWs (<b>A</b>); the concentration optimization for CuNWs@PVP (<b>B</b>); optimization of the ratio of template molecules (CIP) to bifunctional monomers (o-PD: Py) (<b>C</b>); optimization of the number of cycles of MIP electropolymerization (<b>D</b>); optimization of eluent types (<b>E</b>); optimization of elution time and readsorption time (<b>F</b>).</p>
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<p>ECL responses of MIP/CuNWs@PVP/GCE under different CIP concentrations (<b>A</b>); standard curve for detecting CIP (<b>B</b>); stability test of CuNWs@PVP/GCE (a), and elution (b) and readsorption (c) of MIP/CuNWs@PVP/GCE (<b>C</b>); molecular formulas of CIP and its interfering substances (<b>D</b>); selective test (OFX: ofloxacin, LMF: lomefloxacin, ENX: enoxacin, and NOR: norfloxacin) of MIECLS (<b>E</b>); reproducibility test of MIECLS (<b>F</b>).</p>
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<p>The design principle of MIP/CuNWs@PVP/GCE and the specific detection mechanism for CIP.</p>
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16 pages, 2762 KiB  
Article
Global and Specific NIR Models for Oxidative Stability Prediction and Cultivar Discrimination in Extra Virgin Olive Oil
by Hande Yılmaz-Düzyaman, Raúl de la Rosa, Nieves Núñez-Sánchez and Lorenzo León
Horticulturae 2025, 11(2), 177; https://doi.org/10.3390/horticulturae11020177 - 6 Feb 2025
Viewed by 571
Abstract
The Oxidative Stability Index (OSI) is crucial for evaluating the commercial, nutritional, and sensory properties of extra virgin olive oils (EVOO). Near-infrared spectroscopy (NIRS) offers a rapid and cost-effective alternative to evaluate OSI with respect to traditional methods like Rancimat. This study aimed [...] Read more.
The Oxidative Stability Index (OSI) is crucial for evaluating the commercial, nutritional, and sensory properties of extra virgin olive oils (EVOO). Near-infrared spectroscopy (NIRS) offers a rapid and cost-effective alternative to evaluate OSI with respect to traditional methods like Rancimat. This study aimed to develop a robust global NIRS model for predicting OSI in EVOO and compare it with specific models for key Spanish cultivars such as ‘Picual’, ‘Arbequina’, and ‘Sikitita’ (a new, recently released cultivar for commercial hedgerow planting systems). Using NIRS spectra from 1100 to 2500 nm, we analyzed 939 samples globally and developed cultivar-specific models based on 59 ‘Picual’, 84 ‘Arbequina’, and 48 ‘Sikitita’ samples. Partial Least Squares (PLS) regression models demonstrated promising results in all sample sets tested, with the global model outperforming individual yearly models, highlighting the importance of incorporating variability to enhance predictive performance. Log-transformed OSI data improved accuracy across all models. Additionally, discriminant analysis (LDA) was performed on NIRS spectra from five cultivars (‘Arbequina,’ ‘Picual,’ ‘Koroneiki,’ ‘Sikitita,’ and ‘Arbosana’), a total of 254 samples, achieving 96% accuracy in differentiating monovarietal EVOO samples. These findings demonstrate the versatility of NIRS for OSI modeling and cultivar discrimination, making it a valuable tool for breeding programs and quality assessment. Full article
(This article belongs to the Special Issue Advances in Genetics, Breeding, and Quality Improvement of Olive)
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<p>Violin plots of the raw OSI data illustrate variability across the different approaches. Approach 1: Calibration data from 2021 with validation data from 2022. Approach 2: Calibration data spanning two years (2021 and 2022) with validation data from 2023. Approach 3: A three-year dataset, partitioned with 75% for calibration and 25% for validation, selected randomly. Black point: mean; red line: median; black lines: standard deviation.</p>
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<p>Spectral data of 939 extra virgin olive oil samples without pretreatment.</p>
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<p>Predicted vs. reference values of oxidative stability index (OSI) and log-transformed oxidative stability index (logOSI) for Approach 1, Approach 2, and Approach 3.</p>
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<p>Predicted vs. reference values of oxidative stability index (OSI) and log-transformed oxidative stability index (logOSI) for Approach 1, Approach 2, and Approach 3.</p>
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<p>Regression coefficients obtained from leave-one-out full cross-validation of cultivar-specific models.</p>
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<p>Predicted vs reference raw oxidative stability index (OSI) values shown for each cultivar: ‘Arbequina’, ‘Picual’, and ‘Sikitita’.</p>
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<p>Linear Discriminant Analysis (LDA) was performed on monovarietal EVOOs from five cultivars: ‘Arbequina’, ‘Arbosana’, ‘Koroneiki’, ‘Picual’, and ‘Sikitita’.</p>
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12 pages, 1901 KiB  
Article
Advancing Near-Infrared Probes for Enhanced Breast Cancer Assessment
by Mohammad Pouriayevali, Ryley McWilliams, Avner Bachar, Parmveer Atwal, Ramani Ramaseshan and Farid Golnaraghi
Sensors 2025, 25(3), 983; https://doi.org/10.3390/s25030983 - 6 Feb 2025
Viewed by 262
Abstract
Breast cancer remains a leading cause of cancer-related deaths among women, emphasizing the critical need for early detection and monitoring techniques. Conventional imaging modalities such as mammography, MRI, and ultrasound have face sensitivity, specificity, cost, and patient comfort limitations. This study introduces a [...] Read more.
Breast cancer remains a leading cause of cancer-related deaths among women, emphasizing the critical need for early detection and monitoring techniques. Conventional imaging modalities such as mammography, MRI, and ultrasound have face sensitivity, specificity, cost, and patient comfort limitations. This study introduces a handheld Near-Infrared Diffuse Optical Tomography (NIR DOT) probe for breast cancer imaging. The NIRscan probe utilizes multi-wavelength light-emitting diodes (LEDs) and a linear charge-coupled device (CCD) sensor to acquire real-time optical data, reconstructing cross-sectional images of breast tissue based on scattering and absorption coefficients. With wavelengths optimized for the differential optical properties of tissue components, the probe enables functional imaging, distinguishing between healthy and malignant tissues. Clinical evaluations have demonstrated its potential for precise tumor localization and monitoring therapeutic responses, achieving a sensitivity of 94.7% and specificity of 84.2%. By incorporating machine learning algorithms and a modified diffusion equation (MDE), the system enhances the accuracy and speed of image reconstruction, supporting rapid, non-invasive diagnostics. This development represents a significant step forward in portable, cost-effective solutions for breast cancer detection, with potential applications in low-resource settings and diverse clinical environments. Full article
(This article belongs to the Special Issue Advanced Sensors for Detection of Cancer Biomarkers and Virus)
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<p>Face of probe head [<a href="#B1-sensors-25-00983" class="html-bibr">1</a>].</p>
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<p>System architecture of the NIR handheld probe, showing the integration of the ARM Cortex M4 microcontroller, ADC, CCD sensor, and light source control [<a href="#B1-sensors-25-00983" class="html-bibr">1</a>].</p>
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<p>The custom software’s graphical user interface (GUI) version 0.4 is presented on a Windows platform.</p>
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<p>An optical image of a physical phantom with a 4.5 mm spherical abnormality at the center was captured at 690 nm [<a href="#B1-sensors-25-00983" class="html-bibr">1</a>].</p>
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<p>Reconstructed 3D optical image of a patient’s tumor using 12 slices at 690 nm: (<b>a</b>) Reconstructed image using the NIR probe’s MDE imaging. (<b>b</b>) A 3D volume model of the tumor created using MATLAB rendering capabilities with gaps between the adjacent slices interpolated [<a href="#B19-sensors-25-00983" class="html-bibr">19</a>].</p>
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<p>Diagram illustrating the photon propagation paths in a highly scattering medium. LED light travels along multiple, semi-circular paths through the tissue, converging at various points [<a href="#B19-sensors-25-00983" class="html-bibr">19</a>].</p>
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18 pages, 3861 KiB  
Article
Wearable Wireless Functional Near-Infrared Spectroscopy System for Cognitive Activity Monitoring
by Mauro Victorio, James Dieffenderfer, Tanner Songkakul, Josh Willeke, Alper Bozkurt and Vladimir A. Pozdin
Biosensors 2025, 15(2), 92; https://doi.org/10.3390/bios15020092 - 6 Feb 2025
Viewed by 396
Abstract
From learning environments to battlefields to marketing teams, the desire to measure cognition and cognitive fatigue in real time has been a grand challenge in optimizing human performance. Near-infrared spectroscopy (NIRS) is an effective optical technique for measuring changes in subdermal hemodynamics, and [...] Read more.
From learning environments to battlefields to marketing teams, the desire to measure cognition and cognitive fatigue in real time has been a grand challenge in optimizing human performance. Near-infrared spectroscopy (NIRS) is an effective optical technique for measuring changes in subdermal hemodynamics, and it has been championed as a more practical method for monitoring brain function compared to MRI. This study reports on an innovative functional NIRS (fNIRS) sensor that integrates the entire system into a compact and wearable device, enabling long-term monitoring of patients. The device provides unrestricted mobility to the user with a Bluetooth connection for settings configuration and data transmission. A connected device, such as a smartphone or laptop equipped with the appropriate interface software, collects raw data, then stores and generates real-time analyses. Tests confirm the sensor is sensitive to oxy- and deoxy-hemoglobin changes on the forehead region, which indicate neuronal activity and provide information for brain activity monitoring studies. Full article
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<p>Developed wearable fNIRS system. (<b>a</b>) Top view of the device components, (<b>b</b>) skin-facing view with the flexible shroud applied, (<b>c</b>) prototype device on a participant, attached using 3M Tegaderm to fix both the sensor and the battery, and (<b>d</b>) device block diagram. The scale bar is 10 mm.</p>
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<p>Spectral output (<b>a</b>) and total irradiated power (<b>b</b>) of the LEDs used for fNIRS sensing and operated at drive currents an order of magnitude below the safety limits for irradiated power. The different colors are subliminal messaging for red and NIR distinction. (<b>a</b>) contains data for two devices.</p>
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<p>Optical system timing for low power and precision measurements. (<b>a</b>) At first, (1) the current driver is enabled, and LED MOSFET is switched on; (2) after an 800 µs delay, ADC readings start; (3) after the readings, the current driver is disabled and the LED MOSFET is switched off; and (4) the drive current and gain values for the next LED are written. (<b>b</b>) The voltage at the ADC recorded by an oscilloscope during the optical system’s activation shows delayed LED activation and signal stabilization. The optical signal stabilizes within 800 µs.</p>
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<p>Validation study of hemodynamic responses measured using the wearable fNIRS device. Real-time measurements of (<b>a</b>) arterial occlusion with the sensor on the wrist and (<b>b</b>) breath-holding with the sensor on the left prefrontal cortex. The inset shows the PPG waveform for the heart rate calculations.</p>
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<p>Time-domain fNIRS response to cognitive activity in Group 1. Three-digit and two-digit math operations were performed for 2 min with 2 min of rest for five cycles of each operation. (<b>a</b>) Sample participant data showing time-domain changes in hemoglobin concentrations. The time-domain fluctuations in oxygenated hemoglobin correspond to periods of cognitive activity. (<b>b</b>) Sample time-domain response to the three-digit arithmetic activity. The shaded region represents the 2-min arithmetic task, which is followed by 2 min of rest. Changes in oxyhemoglobin during 2 min of the three-digit (<b>c</b>) and two-digit (<b>d</b>) arithmetic tasks. (<b>e</b>) The oxy-hemoglobin response to the three-digit arithmetic task changed with the increasing number of cycles for one participant, correlating to fatigue.</p>
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<p>Analysis of oxy-hemoglobin changes in the participants in Group 2. (<b>a</b>) Wavelet transform of Homer3-processed oxy-hemoglobin changes during resting and arithmetic tasks for participants 6–10. (<b>b</b>) Synchrosqueezed magnitude of the 2 mHz component for participants in Group 2. Time-domain changes in oxygenated hemoglobin during 2 min of three-digit (<b>c</b>) and two-digit (<b>d</b>) arithmetic.</p>
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23 pages, 3733 KiB  
Article
A Novel Model for Soil Organic Matter and Total Nitrogen Detection Based on Visible/Shortwave Near-Infrared Spectroscopy
by Jiangtao Qi, Panting Cheng, Junbo Zhou, Mengyi Zhang, Qin Gao, Peng He, Lujun Li, Francis Collins Muga and Li Guo
Land 2025, 14(2), 329; https://doi.org/10.3390/land14020329 - 6 Feb 2025
Viewed by 445
Abstract
Soil organic matter (SOM) and total nitrogen (TN) are critical indicators for assessing soil fertility. Although laboratory chemical analysis methods can accurately measure their contents, these techniques are time-consuming and labor-intensive. Spectral technology, characterized by its high sensitivity and convenience, has been increasingly [...] Read more.
Soil organic matter (SOM) and total nitrogen (TN) are critical indicators for assessing soil fertility. Although laboratory chemical analysis methods can accurately measure their contents, these techniques are time-consuming and labor-intensive. Spectral technology, characterized by its high sensitivity and convenience, has been increasingly integrated with machine learning algorithms for soil nutrient monitoring. However, the process of spectral data analysis remains complex and requires further optimization for simplicity and efficiency to improve prediction accuracy. This study proposes a novel model to enhance the accuracy of SOM and TN predictions in northeast China’s black soil. Visible/Shortwave Near-Infrared Spectroscopy (Vis/SW-NIRS) data within the 350–1070 nm range were collected, preprocessed, and dimensionality-reduced. The scores of the first nine principal components after a partial least squares (PLS) dimensionality reduction were selected as inputs, and the measured SOM and TN contents were used as outputs to build a back-propagation neural network (BPNN) model. The results show that spectral data processed by the combination of standard normal variate (SNV) and multiple scattering correction (MSC) have the best modeling performance. To improve the accuracy and stability of this model, three algorithms named random search (RS), grid search (GS), and Bayesian optimization (BO) were introduced. The results demonstrate that Vis/SW-NIRS provides reliable predictions of SOM and TN contents, with the PLS-RS-BPNN model achieving the best performance (R2 = 0.980 and 0.972, RMSE = 1.004 and 0.006 for SOM and TN, respectively). Compared to traditional models such as random forests (RF), one-dimensional convolutional neural networks (1D-CNNs), and extreme gradient boosting (XGBoost), the proposed PLS-RS-BPNN model improves R2 by 0.164–0.344 in predicting SOM and by 0.257–0.314 in predicting TN, respectively. These findings confirm the potential of Vis/SW-NIRS technology and the PLS-RS-BPNN model as effective tools for soil nutrient prediction, offering valuable insights for the application of spectral technology in sensing soil information. Full article
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<p>Overview of the study area.</p>
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<p>Topology diagram of the BPNN model. Note: <span class="html-italic">X</span> denotes the input to the model, n indicates the number of inputs, <span class="html-italic">p</span> represents the number of hidden neurons, <span class="html-italic">Y</span> signifies the model’s output, and s refers to the number of outputs.</p>
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<p>The flowchart of the predictive model.</p>
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<p>Spectral data preprocessing results: (<b>a</b>) raw spectrum; (<b>b</b>) spectrum after SG processing; (<b>c</b>) spectrum after SNV processing; (<b>d</b>) spectrum after MSC processing; (<b>e</b>) spectrum after SG+SNV processing; (<b>f</b>) spectrum after SG+MSC processing; (<b>g</b>) spectrum after SNV+MSC processing; (<b>h</b>) spectrum after SG+SNV+MSC processing.</p>
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<p>Spectral data preprocessing results: (<b>a</b>) raw spectrum; (<b>b</b>) spectrum after SG processing; (<b>c</b>) spectrum after SNV processing; (<b>d</b>) spectrum after MSC processing; (<b>e</b>) spectrum after SG+SNV processing; (<b>f</b>) spectrum after SG+MSC processing; (<b>g</b>) spectrum after SNV+MSC processing; (<b>h</b>) spectrum after SG+SNV+MSC processing.</p>
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<p>Cumulative variance statistics of the top 20 principal components after PLS dimensionality reduction. Note: (<b>a</b>,<b>b</b>) are the X-variance interpretation and Y-variance interpretation plots, respectively, after PLS downscaling when SOM content was considered; (<b>c</b>,<b>d</b>) are the X-variance interpretation and Y-variance interpretation plots, respectively, after PLS downscaling when TN content was considered.</p>
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<p>Prediction effect of each optimization model on SOM and TN. Note: The evaluation metric with the subscript “c” refers to the evaluation metric for the model’s training set, while the evaluation metric with the subscript “p” refers to the evaluation metric for the model’s prediction set. For example, <span class="html-italic">R</span><sup>2</sup><span class="html-italic"><sub>c</sub></span> represents the correlation coefficient for the training set, and <span class="html-italic">R</span><sup>2</sup><span class="html-italic"><sub>p</sub></span> represents the correlation coefficient for the prediction set.</p>
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<p>Prediction effect of each optimization model on SOM and TN. Note: The evaluation metric with the subscript “c” refers to the evaluation metric for the model’s training set, while the evaluation metric with the subscript “p” refers to the evaluation metric for the model’s prediction set. For example, <span class="html-italic">R</span><sup>2</sup><span class="html-italic"><sub>c</sub></span> represents the correlation coefficient for the training set, and <span class="html-italic">R</span><sup>2</sup><span class="html-italic"><sub>p</sub></span> represents the correlation coefficient for the prediction set.</p>
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22 pages, 4649 KiB  
Article
Deep Learning Model Compression and Hardware Acceleration for High-Performance Foreign Material Detection on Poultry Meat Using NIR Hyperspectral Imaging
by Zirak Khan, Seung-Chul Yoon and Suchendra M. Bhandarkar
Sensors 2025, 25(3), 970; https://doi.org/10.3390/s25030970 - 6 Feb 2025
Viewed by 330
Abstract
Ensuring the safety and quality of poultry products requires efficient detection and removal of foreign materials during processing. Hyperspectral imaging (HSI) offers a non-invasive mechanism to capture detailed spatial and spectral information, enabling the discrimination of different types of contaminants from poultry muscle [...] Read more.
Ensuring the safety and quality of poultry products requires efficient detection and removal of foreign materials during processing. Hyperspectral imaging (HSI) offers a non-invasive mechanism to capture detailed spatial and spectral information, enabling the discrimination of different types of contaminants from poultry muscle and non-muscle external tissues. When integrated with advanced deep learning (DL) models, HSI systems can achieve high accuracy in detecting foreign materials. However, the high dimensionality of HSI data, the computational complexity of DL models, and the high-paced nature of poultry processing environments pose challenges for real-time implementation in industrial settings, where the speed of imaging and decision-making is critical. In this study, we address these challenges by optimizing DL inference for HSI-based foreign material detection through a combination of post-training quantization and hardware acceleration techniques. We leveraged hardware acceleration utilizing the TensorRT module for NVIDIA GPU to enhance inference speed. Additionally, we applied half-precision (called FP16) post-training quantization to reduce the precision of model parameters, decreasing memory usage and computational requirements without any loss in model accuracy. We conducted simulations using two hypothetical hyperspectral line-scan cameras to evaluate the feasibility of real-time detection in industrial conditions. The simulation results demonstrated that our optimized models could achieve inference times compatible with the line speeds of poultry processing lines between 140 and 250 birds per minute, indicating the potential for real-time deployment. Specifically, the proposed inference method, optimized through hardware acceleration and model compression, achieved reductions in inference time of up to five times compared to unoptimized, traditional GPU-based inference. In addition, it resulted in a 50% decrease in model size while maintaining high detection accuracy that was also comparable to the original model. Our findings suggest that the integration of post-training quantization and hardware acceleration is an effective strategy for overcoming the computational bottlenecks associated with DL inference on HSI data. Full article
(This article belongs to the Special Issue Spectral Detection Technology, Sensors and Instruments, 2nd Edition)
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<p>RGB pseudo-color images derived from NIR hyperspectral images with (<b>a</b>) 5 × 5 mm FMs; (<b>b</b>) 2 × 2 mm FMs; (<b>c</b>) no FMs.</p>
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<p>Inference pipeline for FM detection.</p>
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<p>Architecture of the GAN discriminator encoder (shown in a red dotted box) for inference, as part of the overall discriminator, which includes both an encoder and a decoder used during training. Two GAN discriminators are trained to effectively differentiate between the spectral signatures of muscle and non-muscle external tissues.</p>
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<p>Binary detection result maps from (<b>a</b>) ground truth; (<b>b</b>) sub-engine E1 (muscle channel); (<b>c</b>) sub-engine E2 (non-muscle external tissue channel); (<b>d</b>) fused model.</p>
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<p>(<b>a</b>) Latency versus batch size for sub-engine E1 across all four inference engines; (<b>b</b>) latency versus batch size for sub-engine E2 across all four inference engines.</p>
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<p>(<b>a</b>) Inference throughput versus batch size for sub-engine E1 across all four inference engines; (<b>b</b>) Iinference throughput versus batch size for sub-engine E2 across all four inference engines.</p>
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<p>(<b>a</b>) The 256k-pixel SWIR camera hypercube rate versus batch size for sub-engine E1 (muscle discriminator) across all four inference engines; (<b>b</b>) 256k-pixel SWIR camera hypercube rate versus batch size for sub-engine E2 (non-muscle discriminator) across all four inference engines.</p>
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<p>(<b>a</b>) The 108k-pixel NIR camera hypercube rate versus batch size for sub-engine E1 (utilizing muscle discriminator) across all four inference engines; (<b>b</b>) 108k-pixel NIR camera hypercube rate versus batch size for sub-engine E2 (utilizing non-muscle discriminator) across all four inference engines.</p>
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34 pages, 6042 KiB  
Article
Exploring the Dependence of Spectral Properties on Canopy Temperature with Ground-Based Sensors: Implications for Synergies Between Remote-Sensing VSWIR and TIR Data
by Christos H. Halios, Stefan T. Smith, Brian J. Pickles, Li Shao and Hugh Mortimer
Sensors 2025, 25(3), 962; https://doi.org/10.3390/s25030962 (registering DOI) - 5 Feb 2025
Viewed by 287
Abstract
Spaceborne instruments have an irreplaceable role in detecting fundamental vegetation features that link physical properties to ecological theory, but their success depends on our understanding of the complex dynamics that control plant spectral properties—a scale-dependent challenge. We explored differences between the warmer and [...] Read more.
Spaceborne instruments have an irreplaceable role in detecting fundamental vegetation features that link physical properties to ecological theory, but their success depends on our understanding of the complex dynamics that control plant spectral properties—a scale-dependent challenge. We explored differences between the warmer and cooler areas of tree canopies with a ground-based experimental layout consisting of a spectrometer and a thermal camera mounted on a portable crane that enabled synergies between thermal and spectral reflectance measurements at the fine scale. Thermal images were used to characterise the thermal status of different parts of a dense circular cluster of containerised trees, and their spectral reflectance was measured. The sensitivity of the method was found to be unaffected by complex interactions. A statistically significant difference in both reflectance in the visible (VIS), near-infrared (NIR), and shortwave infrared (SWIR) bands and absorption features related to the chlorophyll, carotenoid, and water absorption bands was found between the warmer and cooler parts of the canopy. These differences were reflected in the Photochemical Reflectance Index with values decreasing as surface temperature increases and were related to higher carotenoid content and lower Leaf Area Index (LAI) values of the warmer canopy areas. With the increasingly improving resolution of data from airborne and spaceborne visible, near-infrared, and shortwave infrared (VSWIR) imaging spectrometers and thermal infrared (TIR) instruments, the results of this study indicate the potential of synergies between thermal and spectral measurements for the purpose of more accurately assessing the complex biochemical and biophysical characteristics of vegetation canopies. Full article
(This article belongs to the Special Issue Application of Satellite Remote Sensing in Geospatial Monitoring)
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<p>(<b>a</b>): The portable crane used for the top-of-the-tree canopy reflectance measurements. (<b>b</b>): Thermal camera and fibre optic attached on the powerhead.</p>
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<p>The location of the experimental site (Shinfield Farm of the University of Reading 51°24′45.4″ N 0°54′39.4″ W). The site is depicted with the circle (<b>a</b>). Tree T7 and the main dimensions discussed in text: height of the tree (x<sub>1</sub>), vertical extent (x<sub>2</sub>), and diameter of the canopy (x<sub>3</sub>) (<b>b</b>). Schematic representation of the tree cluster. Filled circles and <span class="html-italic">Ti</span> for <span class="html-italic">i</span> = 1:7 denote trees, and the names of the trees respectively; ‘x’ symbols show the location of the points A, B, C, D, E, and F. Distances AB, CD, and EF are 3 m, 3.10 m, and 2.60 m, respectively. Dimensions shown are not to scale. Open circles and crosses denote soil moisture and air temperature sensors, respectively (<b>c</b>). The tree cluster, as seen from northwest (<math display="inline"><semantics> <mrow> <mo>~</mo> <msup> <mrow> <mn>320</mn> </mrow> <mo>°</mo> </msup> <mo stretchy="false">)</mo> </mrow> </semantics></math> (<b>d</b>).</p>
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<p>Example of continuum analysis for the absorption features between 400 nm and 550 nm for one of the canopy reflectance spectra shown in Figure 6: (<b>a</b>) measured reflectance spectrum between the two continuum endpoints of the feature (400 nm and 550 nm) and continuum line; (<b>b</b>) continuum-removed spectrum showing the main absorption features: absorption depth <span class="html-italic">(D</span><sub>0</sub><span class="html-italic">)</span>, width of the absorption center (full-width of feature at half-maximum absorption depth—<span class="html-italic">σ</span>), areas at the left and right of the absorption center (<span class="html-italic">A</span><sub>1</sub> and <span class="html-italic">A</span><sub>2</sub>, respectively).</p>
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<p>Histograms of relative frequency of the <math display="inline"><semantics> <mrow> <mstyle scriptlevel="0" displaystyle="true"> <mfrac bevelled="true"> <mrow> <msub> <mi>A</mi> <mi>c</mi> </msub> </mrow> <mrow> <msub> <mi>A</mi> <mi>w</mi> </msub> </mrow> </mfrac> </mstyle> </mrow> </semantics></math> between cool and warm temperatures (<b>a</b>); surface temperature corresponding to all values (<b>b</b>); values in the first quantile (<b>c</b>); and values in the third quantile (<b>d</b>) of the <math display="inline"><semantics> <mrow> <mstyle scriptlevel="0" displaystyle="true"> <mfrac bevelled="true"> <mrow> <msub> <mi>A</mi> <mi>c</mi> </msub> </mrow> <mrow> <msub> <mi>A</mi> <mi>w</mi> </msub> </mrow> </mfrac> </mstyle> </mrow> </semantics></math> parameter. Parameters listed in (<b>b</b>–<b>d</b>): cool to warm ratio: average (±standard deviation) of the <math display="inline"><semantics> <mrow> <mstyle scriptlevel="0" displaystyle="true"> <mfrac bevelled="true"> <mrow> <msub> <mi>A</mi> <mi>c</mi> </msub> </mrow> <mrow> <msub> <mi>A</mi> <mi>w</mi> </msub> </mrow> </mfrac> </mstyle> </mrow> </semantics></math> parameter; <span class="html-italic">N<sub>cool</sub></span> (<span class="html-italic">N<sub>warm</sub></span>): number of pixels used to create the cool (warm) area histogram.</p>
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<p>Composite plot of leaf-level reflectance spectra. Median reflectance is plotted as a solid thick line; the range between 5th and 95th percentiles as shaded areas.</p>
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<p>Composite plot of canopy-level reflectance spectra for (<b>a</b>) all measurements (104 individual spectra taken on 13 August 2019) and (<b>b</b>) measurements corresponding to the third (&gt;75th) and first (&lt;25th) quartiles of the <math display="inline"><semantics> <mrow> <mstyle scriptlevel="0" displaystyle="true"> <mfrac bevelled="true"> <mrow> <msub> <mi>A</mi> <mi>c</mi> </msub> </mrow> <mrow> <msub> <mi>A</mi> <mi>w</mi> </msub> </mrow> </mfrac> </mstyle> </mrow> </semantics></math> ratio. Median reflectance is plotted as a solid thick line; the range between 5th and 95th percentiles as shaded areas.</p>
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<p><span class="html-italic">PRI</span> obtained from the different datasets. Bullets correspond to median values and error bars to 1st and 99th percentiles.</p>
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<p>Sensitivity of <span class="html-italic">PRI</span> to <span class="html-italic">LAI</span> and carotenoid (<span class="html-italic">C</span><span class="html-italic"><sub>ab</sub></span>) content variability. Application to canopy-simulated reflectance using PROSAIL-5D model.</p>
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<p>Schematic representation of the jib crane.</p>
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<p>Composite plots of top of the canopy spectral reflectance measurements (Stage i) for measurements taken at 1.75 m (<b>a</b>), 1.85 m (<b>b</b>), 1.95 m (<b>c</b>), 2.10 m (<b>d</b>), 2.15 m (<b>e</b>), 2.25 m (<b>f</b>), 2.50 m (<b>g</b>), 2.65 m (<b>h</b>) above the mean canopy height. Median reflectance is plotted as a solid thick line; interquartile range (25th–75th percentiles) as dotted lines surrounding shaded areas. Parameters listed: <span class="html-italic">N</span>: number of spectra measured, <span class="html-italic">A</span>: source area for the measurements taken with the spectrometer (<span class="html-italic">A<sub>sp</sub></span>) and the thermal camera (<span class="html-italic">A<sub>tc</sub></span>). <span class="html-italic">h</span>: height of the sensors above mean canopy level.</p>
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18 pages, 12390 KiB  
Article
DeiT and Image Deep Learning-Driven Correction of Particle Size Effect: A Novel Approach to Improving NIRS-XRF Coal Quality Analysis Accuracy
by Jiaxin Yin, Ruonan Liu, Wangbao Yin, Suotang Jia and Lei Zhang
Sensors 2025, 25(3), 928; https://doi.org/10.3390/s25030928 - 4 Feb 2025
Viewed by 409
Abstract
Coal, as a vital global energy resource, directly impacts the efficiency of power generation and environmental protection. Thus, rapid and accurate coal quality analysis is essential to promote its clean and efficient utilization. However, combined near-infrared spectroscopy and X-ray fluorescence (NIRS-XRF) spectroscopy often [...] Read more.
Coal, as a vital global energy resource, directly impacts the efficiency of power generation and environmental protection. Thus, rapid and accurate coal quality analysis is essential to promote its clean and efficient utilization. However, combined near-infrared spectroscopy and X-ray fluorescence (NIRS-XRF) spectroscopy often suffer from the particle size effect of coal samples, resulting in unstable and inaccurate analytical outcomes. This study introduces a novel correction method combining the Segment Anything Model (SAM) for precise particle segmentation and Data-Efficient Image Transformers (DeiTs) to analyze the relationship between particle size and ash measurement errors. Microscopic images of coal samples are processed with SAM to generate binary mask images reflecting particle size characteristics. These masks are analyzed using the DeiT model with transfer learning, building an effective correction model. Experiments show a 22% reduction in standard deviation (SD) and root mean square error (RMSE), significantly enhancing ash prediction accuracy and consistency. This approach integrates cutting-edge image processing and deep learning, effectively reducing submillimeter particle size effects, improving model adaptability, and enhancing measurement reliability. It also holds potential for broader applications in analyzing complex samples, advancing automation and efficiency in online analytical systems, and driving innovation across industries. Full article
(This article belongs to the Special Issue Deep Learning for Perception and Recognition: Method and Applications)
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<p>NIRS-XRF combined coal quality analysis setup for particle size effect correction (CCD: charge-coupled device, FTIR: Fourier-transform infrared spectroscopy, HV Power: high voltage power, HG: hydrogen generator, BW: beryllium window, CM: collimator, SDD: silicon drift detector, PLC: programmable logic controller).</p>
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<p>Schematic diagram of the sample cell and the corresponding magnified image showing the measurement area.</p>
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<p>Overall construction process of the particle size effect correction model.</p>
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<p>Basic structure of the SAM model.</p>
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<p>Comparison of different segmentation methods. (<b>a</b>) Coal sample original microscopic image; (<b>b</b>) Watershed segmentation using convex hull analysis; (<b>c</b>) SAM segmentation.</p>
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<p>Teacher–student distillation training in DeiT model.</p>
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<p>NIRS spectra of the same coal sample leveled repeatedly with different particle sizes.</p>
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<p>XRF energy spectra of the same coal sample leveled repeatedly with different particle sizes.</p>
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<p>Image processing workflow.</p>
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<p>Comparison of coal particle images in the dataset.</p>
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<p>Comparison of standard deviation (SD) before and after correction.</p>
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<p>Comparison of root mean square error (RMSE) before and after correction.</p>
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