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Search Results (169,563)

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16 pages, 2982 KiB  
Article
Research on Negative Road Obstacle Detection Based on Multimodal Feature Enhancement and Fusion
by Guanglei Huo, Chuqing Cao, Yaxin Li, Wenwei Lin and Chentao Zhang
Appl. Sci. 2025, 15(3), 1292; https://doi.org/10.3390/app15031292 (registering DOI) - 26 Jan 2025
Abstract
To address the issues of low recognition rates and poor detection accuracy for road negative obstacles caused by insufficient feature representation, we propose a novel detection framework: the Negative Road Obstacles Segmentation Network (NROSegNet). The detection performance of the algorithm is improved through [...] Read more.
To address the issues of low recognition rates and poor detection accuracy for road negative obstacles caused by insufficient feature representation, we propose a novel detection framework: the Negative Road Obstacles Segmentation Network (NROSegNet). The detection performance of the algorithm is improved through a data enhancement strategy based on feature splicing and an adaptive feature enhancement module. Specifically, the data augmentation strategy introduces negative obstacle features into other datasets through geometric transformations and random splicing, effectively increasing the diversity of training data. This can solve the problem of an uneven distribution of data features while improving the performance of the model in capturing illumination changes and local details. The framework further adopts a dynamic multi-scale feature enhancement module to improve the perception of local details and global semantics. A robust multimodal data fusion mechanism and edge-aware optimization strategy are designed to effectively alleviate the problems of noise interference and boundary blur. The experimental results show that the NROSegNet proposed in this paper achieves 70.6 and 83.0 in mIoU and mF1, respectively, which is 2.8 percentage points and 2.9 percentage points higher than other methods. The results fully demonstrate its excellent performance in precise segmentation and boundary detail processing. Full article
19 pages, 8435 KiB  
Article
DCFA-YOLO: A Dual-Channel Cross-Feature-Fusion Attention YOLO Network for Cherry Tomato Bunch Detection
by Shanglei Chai, Ming Wen, Pengyu Li, Zhi Zeng and Yibin Tian
Agriculture 2025, 15(3), 271; https://doi.org/10.3390/agriculture15030271 (registering DOI) - 26 Jan 2025
Abstract
To better utilize multimodal information for agriculture applications, this paper proposes a cherry tomato bunch detection network using dual-channel cross-feature fusion. It aims to improve detection performance by employing the complementary information of color and depth images. Using the existing YOLOv8_n as the [...] Read more.
To better utilize multimodal information for agriculture applications, this paper proposes a cherry tomato bunch detection network using dual-channel cross-feature fusion. It aims to improve detection performance by employing the complementary information of color and depth images. Using the existing YOLOv8_n as the baseline framework, it incorporates a dual-channel cross-fusion attention mechanism for multimodal feature extraction and fusion. In the backbone network, a ShuffleNetV2 unit is adopted to optimize the efficiency of initial feature extraction. During the feature fusion stage, two modules are introduced by using re-parameterization, dynamic weighting, and efficient concatenation to strengthen the representation of multimodal information. Meanwhile, the CBAM mechanism is integrated at different feature extraction stages, combined with the improved SPPF_CBAM module, to effectively enhance the focus and representation of critical features. Experimental results using a dataset obtained from a commercial greenhouse demonstrate that DCFA-YOLO excels in cherry tomato bunch detection, achieving an mAP50 of 96.5%, a significant improvement over the baseline model, while drastically reducing computational complexity. Furthermore, comparisons with other state-of-the-art YOLO and other object detection models validate its detection performance. This provides an efficient solution for multimodal fusion for real-time fruit detection in the context of robotic harvesting, running at 52fps on a regular computer. Full article
(This article belongs to the Special Issue Computational, AI and IT Solutions Helping Agriculture)
16 pages, 980 KiB  
Article
Research on Detection Methods for Gas Pipeline Networks Under Small-Hole Leakage Conditions
by Ying Zhao, Lingxi Yang, Qingqing Duan, Zhiqiang Zhao and Zheng Wang
Sensors 2025, 25(3), 755; https://doi.org/10.3390/s25030755 (registering DOI) - 26 Jan 2025
Abstract
Gas pipeline networks are vital urban infrastructure, susceptible to leaks caused by natural disasters and adverse weather, posing significant safety risks. Detecting and localizing these leaks is crucial for mitigating hazards. However, existing methods often fail to effectively model the time-varying structural data [...] Read more.
Gas pipeline networks are vital urban infrastructure, susceptible to leaks caused by natural disasters and adverse weather, posing significant safety risks. Detecting and localizing these leaks is crucial for mitigating hazards. However, existing methods often fail to effectively model the time-varying structural data of pipelines, limiting their detection capabilities. This study introduces a novel approach for leak detection using a spatial–temporal attention network (STAN) tailored for small-hole leakage conditions. A graph attention network (GAT) is first used to model the spatial dependencies between sensors, capturing the dynamic patterns of adjacent nodes. An LSTM model is then employed for encoding and decoding time series data, incorporating a temporal attention mechanism to capture evolving changes over time, thus improving detection accuracy. The proposed model is evaluated using Pipeline Studio software and compared with state-of-the-art models on a gas pipeline simulation dataset. Results demonstrate competitive precision (91.7%), recall (96.5%), and F1-score (0.94). Furthermore, the method effectively identifies sensor statuses and temporal dynamics, reducing leakage risks and enhancing model performance. This study highlights the potential of deep learning techniques in addressing the challenges of leak detection and emphasizes the effectiveness of spatial–temporal modeling for improved detection accuracy. Full article
(This article belongs to the Section Industrial Sensors)
20 pages, 7231 KiB  
Article
Genome-Wide Identification, Characterization of the ORA (Olfactory Receptor Class A) Gene Family, and Potential Roles in Bile Acid and Pheromone Recognition in Mandarin Fish (Siniperca chuatsi)
by Xiaoru Dong, Maolin Lv, Ming Zeng, Xiaochuan Chen, Jiale Wang and Xufang Liang
Cells 2025, 14(3), 189; https://doi.org/10.3390/cells14030189 (registering DOI) - 26 Jan 2025
Abstract
The ORA (olfactory receptor class A) gene family in teleosts is related to the V1R (vomeronasal 1 receptors) family in mammals and plays a key role in odor detection. Although ORA genes have been identified in several teleosts, their characteristics in mandarin fish [...] Read more.
The ORA (olfactory receptor class A) gene family in teleosts is related to the V1R (vomeronasal 1 receptors) family in mammals and plays a key role in odor detection. Although ORA genes have been identified in several teleosts, their characteristics in mandarin fish (Siniperca chuatsi) have not been explored. In this study, we conducted a comprehensive genomic analysis of the mandarin fish and discovered a complete ORA gene family consisting of five members located on chromosome 2 (ORA1, ORA2, ORA3, ORA4) and chromosome 16 (ORA6). Phylogenetic, synteny, and gene structure analyses revealed typical exon–intron conservation with strong evidence of purifying selection. Tissue expression analysis showed distinct expression profiles for each ORA gene, with some showing sexual dimorphism in specific tissues. The expression of ORA1 and ORA2 in the olfactory epithelium exhibits sexual dimorphism, while ORA3 shows sexual dimorphism in the brain. In situ hybridization confirmed that ORA1, ORA2, ORA3, and ORA6 are expressed in the microvillar sensory neurons of the olfactory epithelium, while ORA4 is expressed in crypt cells. Additionally, molecular docking simulations indicated that the five ORA proteins have a high binding affinity with seven bile acids (LAC, GLAC, CA, TLCA, 3-KLCA, 7-KLCA, and 12-KLCA), with ORAs showing stronger binding affinity with LCA and CA. This study comprehensively characterizes the ORA gene family in mandarin fish, examining its phylogeny, synteny, gene structure, and selection pressure. Furthermore, we found that each ORA displays a distinct expression pattern across multiple tissues, with notable sexual dimorphism, and shows potential binding interactions with specific bile acids and pheromones. Our findings provide valuable insights that enhance the overall understanding of fish ORAs and their potential functions. Full article
Show Figures

Figure 1

Figure 1
<p>Chromosomal localization of <span class="html-italic">ORA</span> members in mandarin fish. <span class="html-italic">ORA1</span>, <span class="html-italic">ORA2</span>, <span class="html-italic">ORA3</span>, and <span class="html-italic">ORA4</span> are located on chromosome 2, while <span class="html-italic">ORA6</span> is located on chromosome 16.</p>
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<p>Phylogenetic tree of <span class="html-italic">ORA</span> family in teleosts. Phylogenetic tree of 108 <span class="html-italic">ORA</span> sequences from 18 teleosts was constructed using maximum likelihood method, with 1000 bootstrap replicates. Sch, <span class="html-italic">S. chuatsi</span>; Cge, <span class="html-italic">C. gerrardi</span>; Lin, <span class="html-italic">L. incognitus</span>; Cau, <span class="html-italic">C. auratus</span>; Mar, <span class="html-italic">M. armatus</span>; Can, <span class="html-italic">C. analis</span>; Pol, <span class="html-italic">P. olivaceus</span>; Tru, <span class="html-italic">T. rubripes</span>; Tni, <span class="html-italic">T. nigroviridis</span>; Gac, <span class="html-italic">G. aculeatus</span>; Oni, <span class="html-italic">O. niloticus</span>; Dre, <span class="html-italic">D. rerio</span>; Ame, <span class="html-italic">A. mexicanus</span>; Ola, <span class="html-italic">O. latipes</span>; Xma, <span class="html-italic">X. maculatus</span>; Loc, <span class="html-italic">L. oculatus</span>; Ssc, <span class="html-italic">S. salar</span>; Gmo, <span class="html-italic">G. morhua</span>. ★ represent <span class="html-italic">ORA</span>s identified in <span class="html-italic">S. chuatsi</span>.</p>
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<p>Collinearity analysis of <span class="html-italic">ORA</span>s. Inter-species collinearity analysis of <span class="html-italic">ORA</span> genes of <span class="html-italic">D. rerio</span>, <span class="html-italic">O. latipes</span> and <span class="html-italic">S. chuatsi</span>. Arrows representing genes indicate coding strands, while red lines illustrate collinearity relationships between <span class="html-italic">ORA</span>s.</p>
Full article ">Figure 4
<p>Conserved structural of <span class="html-italic">ORA</span> genes in teleosts. (<b>A</b>) Evolutionary tree of 18 teleosts from Timetree. Different colors represent different geological periods. (<b>B</b>) Structure of <span class="html-italic">ORA</span>s includes exons and introns.</p>
Full article ">Figure 5
<p>Conservation Analysis of <span class="html-italic">ORA</span>s. (<b>A</b>) Similarity analysis of amino acids from <span class="html-italic">ORA</span>s of 18 species of teleost. (<b>B</b>) Analysis of selective pressure on <span class="html-italic">ORA</span>s. Values of Ka/Ks less than 1 indicate that <span class="html-italic">ORA</span>s in fish have undergone purifying selection during evolution. (<b>C</b>) Phylogenetic tree of <span class="html-italic">ORA</span>s from mandarin fish and motif analysis. (<b>D</b>) Colored boxes represent different conserved motifs, with conserved sequence displayed on far right.</p>
Full article ">Figure 6
<p>Tissue expression profile of <span class="html-italic">ORA</span> family in <span class="html-italic">S. chuatsi</span>. RT-qPCR analysis shows expression levels of <span class="html-italic">ORA1</span>, <span class="html-italic">ORA2</span>, <span class="html-italic">ORA3</span>, <span class="html-italic">ORA4</span>, and <span class="html-italic">ORA6</span> across 16 tissues in both male and female <span class="html-italic">S. chuatsi</span>, along with sex-based expression differences. Blue represents males, and red represents females. * indicates <span class="html-italic">p</span> &lt; 0.05 (significant), and ** indicates <span class="html-italic">p</span> &lt; 0.01 (highly significant). N.A. denotes no detectable expression.</p>
Full article ">Figure 7
<p>Localization of ORAs in olfactory epithelium. (<b>A</b>) H.E. staining of olfactory rosette in grouper. In panel a, the black dashed line indicates the olfactory raphe, and the black arrow points to the olfactory lamellaes. Panel b shows the olfactory lamellae, with the central core in the middle of the olfactory raphe. In panel c, the black short arrow points to crypt cells, the black long arrow points to microvillus olfactory receptor neurons (mORNs), the white short arrow points to ciliated olfactory receptor neurons (cORNs), the white long arrow points to supporting cells, and the asterisk (*) represents basal cells. (<b>B</b>) Fluorescence in situ hybridization was used to identify cells expressing <span class="html-italic">ORA1</span>, <span class="html-italic">ORA2</span>, <span class="html-italic">ORA3</span>, <span class="html-italic">ORA4</span>, and <span class="html-italic">ORA6</span> in olfactory epithelium in <span class="html-italic">S. chuatsi</span>. Red represents cells expressing <span class="html-italic">ORA</span>s, and blue indicates cell nuclei stained with DAPI. Scale bar is 50 μm. The white dashed line indicates the boundary of the olfactory lamellae.</p>
Full article ">Figure 8
<p>Molecular docking of ORA proteins with bile acids. Autodock4 was used to predict binding sites of <span class="html-italic">S. chuatsi</span> ORA1 (<b>A</b>), ORA2 (<b>B</b>), ORA3 (<b>C</b>), ORA4 (<b>D</b>), and ORA6 (<b>E</b>) with LCA. Green molecules represent respective bile acids, and red dashed lines indicate hydrogen bonds. ECL2 is extracellular loop of cell 2.</p>
Full article ">Figure 9
<p>Binding site prediction of mandarin fish ORAs with four pheromones. Autodock4 was used to predict binding sites of <span class="html-italic">S. chuatsi</span> ORA1 (<b>A</b>), ORA2 (<b>B</b>), ORA3 (<b>C</b>), ORA4 (<b>D</b>), and ORA6 (<b>E</b>) with four pheromones: 4-HCA, 17-DHP, AED, and PGF2α. Green molecules represent 17-DHP, blue molecules represent AED, pink molecules represent PGF2α, and yellow molecules represent 4-HCA. Red dashed lines indicate hydrogen bonds.</p>
Full article ">Figure 10
<p>Characteristics of olfactory system in mandarin fish and <span class="html-italic">ORA</span> family expressed in olfactory epithelium. Female or male mandarin fish express <span class="html-italic">ORA</span>s in the microvillus olfactory receptor neurons (mORNs) or crypt cells (CCs) of the olfactory epithelium, and after recognizing bile acids or sex pheromones in the aquatic environment, the information is transmitted to the brain, triggering reproductive behaviors in males or females.</p>
Full article ">
45 pages, 20139 KiB  
Article
Development and Experimental Validation of a Sense-and-Avoid System for a Mini-UAV
by Marco Fiorio, Roberto Galatolo and Gianpietro Di Rito
Drones 2025, 9(2), 96; https://doi.org/10.3390/drones9020096 (registering DOI) - 26 Jan 2025
Abstract
This paper provides an overview of the three-year effort to design and implement a prototypical sense-and-avoid (SAA) system based on a multisensory architecture leveraging data fusion between optical and radar sensors. The work was carried out within the context of the Italian research [...] Read more.
This paper provides an overview of the three-year effort to design and implement a prototypical sense-and-avoid (SAA) system based on a multisensory architecture leveraging data fusion between optical and radar sensors. The work was carried out within the context of the Italian research project named TERSA (electrical and radar technologies for remotely piloted aircraft systems) undertaken by the University of Pisa in collaboration with its industrial partners, aimed at the design and development of a series of innovative technologies for remotely piloted aircraft systems of small scale (MTOW < 25 Kgf). The system leverages advanced computer vision algorithms and an extended Kalman filter to enhance obstacle detection and tracking capabilities. The “Sense” module processes environmental data through a radar and an electro-optical sensor, while the “Avoid” module utilizes efficient geometric algorithms for collision prediction and evasive maneuver computation. A novel hardware-in-the-loop (HIL) simulation environment was developed and used for validation, enabling the evaluation of closed-loop real-time interaction between the “Sense” and “Avoid” subsystems. Extensive numerical simulations and a flight test campaign demonstrate the system’s effectiveness in real-time detection and the avoidance of non-cooperative obstacles, ensuring compliance with UAV aero mechanical and safety constraints in terms of minimum separation requirements. The novelty of this research lies in (1) the design of an innovative and efficient visual processing pipeline tailored for SWaP-constrained mini-UAVs, (2) the formulation an EKF-based data fusion strategy integrating optical data with a custom-built Doppler radar, and (3) the development of a unique HIL simulation environment with realistic scenery generation for comprehensive system evaluation. The findings underscore the potential for deploying such advanced SAA systems in tactical UAV operations, significantly contributing to the safety of flight in non-segregated airspaces Full article
Show Figures

Figure 1

Figure 1
<p>Reference TERSA aircraft.</p>
Full article ">Figure 2
<p>Minimum detection range analytical computation [<a href="#B30-drones-09-00096" class="html-bibr">30</a>].</p>
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<p>(<b>a</b>) Minimum turn radius as a function of aerodynamic, structural, and propulsive constraints for TERSA aircraft. (<b>b</b>) Minimum detection required range as a function of intruder aircraft airspeed.</p>
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<p>Maximum attainable flight path angle @ <math display="inline"><semantics> <mrow> <mi>h</mi> <mo>=</mo> <mn>1000</mn> <mo> </mo> <mi mathvariant="normal">m</mi> </mrow> </semantics></math> for stationary climb.</p>
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<p>SAA typical system integration high-level scheme.</p>
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<p>High-level schematics of the proposed SAA system.</p>
Full article ">Figure 7
<p>Intruder aircraft azimuth and elevation angle reconstruction.</p>
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<p>Sense module computer vision pipeline.</p>
Full article ">Figure 9
<p>Visual representation of the pyramidal expansion of the algorithm.</p>
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<p>Example of KLT feature matcher output.</p>
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<p>Flowchart of KLT algorithm.</p>
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<p>High-level scheme of the finite state machine handling the conflict detection and resolution problem.</p>
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<p>Radar signal processing architecture.</p>
Full article ">Figure 14
<p>(<b>a</b>) Example of a range-Doppler map, (<b>b</b>) CFAR technique, (<b>c</b>) CA-CFAR technique.</p>
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<p>(<b>a</b>) Bi-dimensional CFAR; (<b>b</b>) binary mask showing detected tracks.</p>
Full article ">Figure 16
<p>Phase monopulse configuration.</p>
Full article ">Figure 17
<p>Metrics used for the evaluation of avoidance maneuvers (<b>a</b>); initial position of the intruder aircraft (<b>b</b>).</p>
Full article ">Figure 17 Cont.
<p>Metrics used for the evaluation of avoidance maneuvers (<b>a</b>); initial position of the intruder aircraft (<b>b</b>).</p>
Full article ">Figure 18
<p>Results of evasive maneuver for different initial position and velocity states of the intruder aircraft; (<b>a</b>) minimum distance; (<b>b</b>) maximum normal deviation with respect to the original trajectory; (<b>c</b>) UAV’s 2D trajectory; (<b>d</b>) UAV aileron deflection.</p>
Full article ">Figure 18 Cont.
<p>Results of evasive maneuver for different initial position and velocity states of the intruder aircraft; (<b>a</b>) minimum distance; (<b>b</b>) maximum normal deviation with respect to the original trajectory; (<b>c</b>) UAV’s 2D trajectory; (<b>d</b>) UAV aileron deflection.</p>
Full article ">Figure 19
<p>Intruder position state (<b>a</b>–<b>c</b>) and velocity state (<b>d</b>–<b>f</b>) reconstruction by the EKF for a starboard encounter; <math display="inline"><semantics> <mrow> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>u</mi> <mi>a</mi> <mi>v</mi> </mrow> </msub> <mo>=</mo> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>i</mi> <mi>t</mi> <mi>n</mi> <mi>r</mi> </mrow> </msub> <mo>=</mo> <mn>22</mn> <mo> </mo> <mi mathvariant="normal">m</mi> <mo>/</mo> <mi mathvariant="normal">s</mi> </mrow> </semantics></math>. The first dashed vertical line indicates the moment the intruder is detectable (within radar range); the second dashed line indicates the moment where the EKF has reached convergence, and its output is fed into avoidance algorithms.</p>
Full article ">Figure 19 Cont.
<p>Intruder position state (<b>a</b>–<b>c</b>) and velocity state (<b>d</b>–<b>f</b>) reconstruction by the EKF for a starboard encounter; <math display="inline"><semantics> <mrow> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>u</mi> <mi>a</mi> <mi>v</mi> </mrow> </msub> <mo>=</mo> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>i</mi> <mi>t</mi> <mi>n</mi> <mi>r</mi> </mrow> </msub> <mo>=</mo> <mn>22</mn> <mo> </mo> <mi mathvariant="normal">m</mi> <mo>/</mo> <mi mathvariant="normal">s</mi> </mrow> </semantics></math>. The first dashed vertical line indicates the moment the intruder is detectable (within radar range); the second dashed line indicates the moment where the EKF has reached convergence, and its output is fed into avoidance algorithms.</p>
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<p>High-level scheme of the complete simulation framework.</p>
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<p>Video stream send (<b>a</b>) and receive (<b>b</b>) pipeline schematics.</p>
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<p>SAA camera viewpoint as rendered in Flight Gear (flying over the city of Pisa).</p>
Full article ">Figure 23
<p>Results of a HIL collision scenario in the complete simulation environment. Intruder approaching from starboard side. <math display="inline"><semantics> <mrow> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>U</mi> <mi>A</mi> <mi>V</mi> </mrow> </msub> <mo>=</mo> <mn>22</mn> <mo> </mo> <mi mathvariant="normal">m</mi> <mo>/</mo> <mi mathvariant="normal">s</mi> </mrow> </semantics></math>; <math display="inline"><semantics> <mrow> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>i</mi> <mi>n</mi> <mi>t</mi> <mi>r</mi> </mrow> </msub> <mo>=</mo> <mn>50</mn> <mo> </mo> <mi mathvariant="normal">m</mi> <mo>/</mo> <mi mathvariant="normal">s</mi> </mrow> </semantics></math> Three-dimensional trajectory (<b>a</b>), Euler angles (<b>b</b>), speed components in NED reference frame (<b>c</b>), load factors (<b>d</b>).</p>
Full article ">Figure 23 Cont.
<p>Results of a HIL collision scenario in the complete simulation environment. Intruder approaching from starboard side. <math display="inline"><semantics> <mrow> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>U</mi> <mi>A</mi> <mi>V</mi> </mrow> </msub> <mo>=</mo> <mn>22</mn> <mo> </mo> <mi mathvariant="normal">m</mi> <mo>/</mo> <mi mathvariant="normal">s</mi> </mrow> </semantics></math>; <math display="inline"><semantics> <mrow> <msub> <mrow> <mi>V</mi> </mrow> <mrow> <mi>i</mi> <mi>n</mi> <mi>t</mi> <mi>r</mi> </mrow> </msub> <mo>=</mo> <mn>50</mn> <mo> </mo> <mi mathvariant="normal">m</mi> <mo>/</mo> <mi mathvariant="normal">s</mi> </mrow> </semantics></math> Three-dimensional trajectory (<b>a</b>), Euler angles (<b>b</b>), speed components in NED reference frame (<b>c</b>), load factors (<b>d</b>).</p>
Full article ">Figure 24
<p>Comparison between elevation (<b>a</b>) and azimuth (<b>b</b>) measurements with ground truth for the complete simulation framework.</p>
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<p>Flight Gear rendering of a starboard collision scenario on a coastal landscape with intruder position highlighted with a red bounding box as detected by sense algorithms within the complete simulation framework. Subfigures (<b>a</b>–<b>f</b>) show the evolution of the evasive maneuver.</p>
Full article ">Figure 25 Cont.
<p>Flight Gear rendering of a starboard collision scenario on a coastal landscape with intruder position highlighted with a red bounding box as detected by sense algorithms within the complete simulation framework. Subfigures (<b>a</b>–<b>f</b>) show the evolution of the evasive maneuver.</p>
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<p>SAA system prototype.</p>
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<p>(<b>a</b>) Antenna placement within the nose mockup; (<b>b</b>) camera sensor chosen for the system implementation; (<b>c</b>) Jetson Nano vision processing unit.</p>
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<p>SAA system position and UAV trajectory during flight test at Lucca-Tassignano Airport.</p>
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<p>Reconstructed UAV position states vs. telemetry in base reference frame: (<b>a</b>) <math display="inline"><semantics> <mrow> <mi>x</mi> </mrow> </semantics></math> position state, (<b>b</b>) <math display="inline"><semantics> <mrow> <mi>y</mi> </mrow> </semantics></math> position state, (<b>c</b>) <math display="inline"><semantics> <mrow> <mi>z</mi> </mrow> </semantics></math> position state.</p>
Full article ">Figure 30
<p>Relative azimuth (<b>a</b>,<b>c</b>) and elevation (<b>b</b>,<b>d</b>) angles between target UAV and SAA reference frame for two different flight phases.</p>
Full article ">
19 pages, 2828 KiB  
Article
A 64 × 1 Multi-Mode Linear Single-Photon Avalanche Detector with Storage and Shift Reuse in Histogram
by Hankun Lv, Jingyi Wang, Bu Chen and Zhangcheng Huang
Electronics 2025, 14(3), 509; https://doi.org/10.3390/electronics14030509 (registering DOI) - 26 Jan 2025
Abstract
Single-photon avalanche detectors (SPADs) have significant applications in fields such as autonomous driving. However, processing massive amounts of background data requires substantial storage and computational resources. This paper designs a linear SPAD sensor capable of three detection modes: 2D intensity detection, 3D synchronous [...] Read more.
Single-photon avalanche detectors (SPADs) have significant applications in fields such as autonomous driving. However, processing massive amounts of background data requires substantial storage and computational resources. This paper designs a linear SPAD sensor capable of three detection modes: 2D intensity detection, 3D synchronous detection, and 3D asynchronous detection. A configurable coincidence circuit is used to effectively suppress background light. To overcome the significant resource demands for storage and computation, this paper designs a histogram circuit that simultaneously possesses data storage and shifting capabilities. This circuit can not only perform statistical counting on time data but also shift data to quickly complete computational analysis. The chip is fabricated using a 0.13 μm mixed-signal CMOS process, with a pixel scale of 64 elements, a time resolution of 132 ps, and a power consumption of 12.9 mW. Test results indicate that the chip has good detection capabilities and good background light suppression. When the background light intensity is 6000 lux, the maximum background data are suppressed by 95.4%, and the average suppression rate increases to 86% as the coincidence threshold is raised from 0 to 1. Full article
(This article belongs to the Special Issue Advances in Solid-State Single Photon Detection Devices and Circuits)
17 pages, 3640 KiB  
Article
WO3−x/WS2 Nanocomposites for Fast-Response Room Temperature Gas Sensing
by Svetlana S. Nalimova, Zamir V. Shomakhov, Oksana D. Zyryanova, Valeriy M. Kondratev, Cong Doan Bui, Sergey A. Gurin, Vyacheslav A. Moshnikov and Anton A. Zhilenkov
Molecules 2025, 30(3), 566; https://doi.org/10.3390/molecules30030566 (registering DOI) - 26 Jan 2025
Abstract
Currently, semiconductor gas sensors are being actively studied and used in various fields, including ecology, industry, and medical diagnostics. One of the major challenges is to reduce their operating temperature to room temperature. To address this issue, sensor layers based on WO3−x [...] Read more.
Currently, semiconductor gas sensors are being actively studied and used in various fields, including ecology, industry, and medical diagnostics. One of the major challenges is to reduce their operating temperature to room temperature. To address this issue, sensor layers based on WO3−x/WS2 nanostructures synthesized by the hydrothermal method have been proposed. In this paper, the morphology of the material’s surface and its elemental composition were investigated, as well as the optical band gap. Additionally, changes in the resistance of the WO3−x/WS2 sensor layers under the influence of alcohol vapors at room temperature were analyzed. The results showed that the layers exhibited a significant response, with short response and recovery times. The achieved response value to 1000 ppm of isopropanol was 1.25, with a response time of 13 s and a recovery time of 12 s. The response to 1000 ppm of ethanol was 1.35, and the response and recovery times were 20 s. This indicates that these sensor layers have promising potential for various applications. Full article
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<p>(<b>a</b>) SEM image of WO<sub>3−x</sub>/WS<sub>2</sub> nanocomposite, (<b>b</b>) cleavage of substrate with WO<sub>3−x</sub>/WS<sub>2</sub> sensor layer.</p>
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<p>EDX spectrum of WO<sub>3−x</sub>/WS<sub>2</sub> nanocomposite.</p>
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<p>XPS spectra WO<sub>3−x</sub>/WS<sub>2</sub> nanostructure: survey (<b>a</b>), W 4f (<b>b</b>), O 1s (<b>c</b>), S 2p (<b>d</b>) levels.</p>
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<p>XPS spectra WO<sub>3−x</sub>/WS<sub>2</sub> nanostructure: survey (<b>a</b>), W 4f (<b>b</b>), O 1s (<b>c</b>), S 2p (<b>d</b>) levels.</p>
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<p>Tauc plot of WO<sub>3−x</sub>/WS<sub>2</sub> nanocomposite.</p>
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<p>Sensor resistance when exposed to different target gases.</p>
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<p>Sensor response when exposed to different target gas concentrations.</p>
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<p>Response and recovery times of WO<sub>3−x</sub>/WS<sub>2</sub> nanocomposite when detecting (<b>a</b>) ethanol and (<b>b</b>) isopropanol.</p>
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<p>Influence of humidity on sensor resistance.</p>
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<p>Influence of relative humidity on the sensor response.</p>
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<p>The substrate used for depositing the sensor layer.</p>
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<p>Stages of WO<sub>3−x</sub>/WS<sub>2</sub> nanocomposite synthesis.</p>
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<p>System for generating vapor flows and measuring sensor gas properties.</p>
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13 pages, 2340 KiB  
Article
Preliminary Investigation on Resistance of Beckmannia syzigachne to Clodinafop-Propargyl and Mesosulfuron-Methyl from China
by Licun Peng, Xiangju Li, Shuai Zhang, Xiaotong Guo, Zheng Li, Jingchao Chen, Shouhui Wei and Hailan Cui
Agronomy 2025, 15(2), 314; https://doi.org/10.3390/agronomy15020314 (registering DOI) - 26 Jan 2025
Abstract
Beckmannia syzigachne is one of the most competitive weeds in winter wheat fields in China. In this study, 120 suspected resistant populations of Beckmannia syzigachne were collected from the Anhui, Hubei, Jiangsu, and Shandong Provinces from 2017 to 2019. In total, 110 populations [...] Read more.
Beckmannia syzigachne is one of the most competitive weeds in winter wheat fields in China. In this study, 120 suspected resistant populations of Beckmannia syzigachne were collected from the Anhui, Hubei, Jiangsu, and Shandong Provinces from 2017 to 2019. In total, 110 populations exhibited different levels of resistance to clodinafop-propargyl, 114 populations expressed different levels of resistance to mesosulfuron-methyl, and 105 populations were resistant to both herbicides at different levels. The resistant weeds were mainly distributed in Anhui and Jiangsu Provinces. The detection results of acetyl coA carboxylase (ACCase) and acetolactate synthase (ALS) genes in the resistant populations indicated that ACCase gene mutations occurred in 97 out of 110 populations resistant to clodinafop-propargyl and ALS gene mutations occurred in 25 out of 114 populations resistant to mesosulfuron-methyl. There were several mutation types, including Ile-1781-Leu, Trp-2027-Cys, Ile-2041-Asn, Ile-2041-Val, Asp-2078-Gly, and Gly-2096-Ala in the ACCase sequence and Pro-197-Ser, Pro-197-Thr, Pro-197-His, Pro-197-Leu, Asp-376-Glu, and Trp-574-Leu in the ALS sequence. Among these mutation types, Pro-197-His, Asp-376-Glu, and Trp-574-Leu in the ALS sequence were the first identified in Beckmannia syzigachne. Full article
(This article belongs to the Special Issue Weed Biology and Ecology: Importance to Integrated Weed Management)
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<p>The geographical distribution of <span class="html-italic">B. syzigachne</span> populations with different resistance levels to clodinafop-propargyl from different provinces in China.</p>
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<p>The geographical distribution of <span class="html-italic">B. syzigachne</span> populations with different resistance levels to mesosulfuron-methyl from different provinces in China.</p>
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<p>Mutation information of the ACCase gene in <span class="html-italic">Beckmannia syzigachne</span> (the black areas are the mutation sites).</p>
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<p>Mutation information of the ALS gene in <span class="html-italic">Beckmannia syzigachne</span> (the black areas are the mutation sites).</p>
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17 pages, 3548 KiB  
Article
Wastewater-Based Epidemiological Surveillance in France: The SUM’EAU Network
by Jourdain Frédéric, Toro Laila, Senta-Loÿs Zoé, Deryene Marilyne, Mokni Walid, Azevedo Da Graça Tess, Le Strat Yann, Rahali Sofiane, Yamada Ami, Maisa Anna, Pretet Maël, Sudour Jeanne, Cordevant Christophe, Chesnot Thierry, Roman Veronica, Wilhelm Amandine, Gassilloud Benoît and Mouly Damien
Microorganisms 2025, 13(2), 281; https://doi.org/10.3390/microorganisms13020281 (registering DOI) - 26 Jan 2025
Abstract
Wastewater surveillance is a powerful public health tool which gained global prominence during the COVID-19 pandemic. This article describes the development and implementation of the national wastewater surveillance network in France: SUM’EAU. Preliminary work included defining a sampling strategy, evaluating/optimising analytical methods, launching [...] Read more.
Wastewater surveillance is a powerful public health tool which gained global prominence during the COVID-19 pandemic. This article describes the development and implementation of the national wastewater surveillance network in France: SUM’EAU. Preliminary work included defining a sampling strategy, evaluating/optimising analytical methods, launching a call for tenders to select network laboratories and producing wastewater monitoring indicators. SUM’EAU was then deployed in three stages: (i) a pilot study, (ii) the transfer of analytical activities from the National Reference Laboratory to four selected network laboratories, and (iii) the extension of the system to additional sampling sites. Currently, SUM’EAU monitors SARS-CoV-2 across 54 wastewater treatment plants in mainland France. Once a week on business days, 24 h flow-proportional composite samples are collected at plant inlets and transported at 5 °C (±3 °C) to partner laboratories for analysis. The analytical process involves sample concentration, RNA extraction, and digital RT-PCR/q-RT-PCR to detect and quantify the presence of the SARS-CoV-2 genome in wastewater. Subsequently, data are transferred to Santé publique France, the French National Public Health Agency, for analysis and interpretation. While SUM’EAU has been instrumental in monitoring the COVID-19 pandemic and holds significant potential for broader application, securing sustainable funding for its operation remains a major challenge. Full article
(This article belongs to the Special Issue Surveillance of SARS-CoV-2 Employing Wastewater)
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<p>Selection process for sampling sites based on the size of the area (criterion A), geographic coverage on the departmental scale (criterion B), and the capacity of the WWTP (criterion C). UU: Urban Unit; WWTP: wastewater treatment plant; kg: kilogram; PE: population equivalent.</p>
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<p>Percentage of the population covered per department by the 126 WWTPs selected for the SUM’EAU network.</p>
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<p>SUM’EAU implementation stages. WWTP: wastewater treatment plant; WWS: wastewater surveillance.</p>
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<p>Summary of SUM’EAU’s wastewater indicators production process. * NH<sub>4</sub>-N: ammonium expressed in mg/L of ammonium (NH<sub>4</sub>) as nitrogen (N). § Genome concentration of SARS-CoV-2 determined using the E gene target for quantification and a second target (N1, N2, or IP4) for confirmation.</p>
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<p>Ratio of E gene concentrations measured by the National Reference Laboratory to those measured by the four network laboratories.</p>
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<p>Comparison between three sources of epidemiological data: (i) normalised SARS-CoV-2 concentrations in wastewater (WWI) (represented by the pink line), (ii) COVID-19 incidence rates (Ti) (represented by the green dashed line), and (iii) OSCOUR<sup>®</sup> indicators, for 12 wastewater treatment plants (represented by the blue histograms). WWTP: wastewater treatment plant; WWI: wastewater indicator—ratio of viral concentration of SARS-CoV-2 to concentration of ammonium nitrogen; Ti: incidence rate per 100,000 inhabitants; OSCOUR<sup>®</sup>: number of emergency room visits associated with suspected COVID-19 per 100 visits; W: week.</p>
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<p>Correlations between the wastewater indicator and two epidemiological indicators: incidence rate (Ti) and OSCOUR<sup>®</sup> emergency room visits attributed to SARS-CoV-2 rate per 100,000 people. WWI: wastewater indicator—ratio of viral concentration of SARS-CoV-2 to concentration of ammonium nitrogen; OSCOUR<sup>®</sup>: proportion of emergency room visits associated with COVID-19 per 100 visits; Ti: incidence rate per 100,000 inhabitants; W: week.</p>
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14 pages, 601 KiB  
Article
The Challenge of Developing a Test to Differentiate Actinobacillus pleuropneumoniae Serotypes 9 and 11
by José Luis Arnal Bernal, Ana Belén Fernández Ros, Sonia Lacouture, Janine T. Bossé, László Fodor, Hubert Gantelet, Luis Solans Bernad, Yanwen Li, Paul R. Langford and Marcelo Gottschalk
Microorganisms 2025, 13(2), 280; https://doi.org/10.3390/microorganisms13020280 (registering DOI) - 26 Jan 2025
Abstract
Actinobacillus pleuropneumoniae is a major swine pathogen, classified into 19 serotypes based on capsular polysaccharide (CPS) loci. This study aimed to improve the diagnostic method to differentiate between serotypes 9 and 11, which are challenging to distinguish using conventional serological and molecular methods. [...] Read more.
Actinobacillus pleuropneumoniae is a major swine pathogen, classified into 19 serotypes based on capsular polysaccharide (CPS) loci. This study aimed to improve the diagnostic method to differentiate between serotypes 9 and 11, which are challenging to distinguish using conventional serological and molecular methods. A novel qPCR assay based on locked nucleic acid (LNA) probes was developed and validated using a collection of reference strains representing all known 19 serotypes. The assay demonstrated specificity in detecting the nucleotide variation characteristic of the serotype 9 reference strain. However, the analysis of a clinical isolate collection identified discrepancies between LNA-qPCR and serological results, prompting further investigation of the cps and O-Ag loci. Subsequent nanopore sequencing and whole-genome sequencing of a collection of 31 European clinical isolates, previously identified as serotype 9, 11, or undifferentiated 9/11, revealed significant genetic variations in the cps and O-Ag loci. Ten isolates had a cpsF sequence identical to that of the serotype 11 reference strain, while six isolates had single-nucleotide polymorphisms that were unlikely to cause significant coding changes. In contrast, 15 isolates had interruptions in the cpsF gene, distinct from that found in the serotype 9 reference strain, potentially leading to a serotype 9 CPS structure. In the O-Ag loci, differences between serotypes 9 and 11 were minimal, although some isolates had mutations potentially affecting O-Ag expression. Overall, these findings suggest that multiple genetic events can lead to the formation of a serotype 9 CPS structure, hindering the development of a single qPCR assay capable of detecting all cpsF gene mutations. Our results suggest that, currently, a comprehensive analysis of the cpsF gene is necessary to accurately determine whether the capsule of an isolate corresponds to serotype 9 or 11. Although such analyses are feasible with the advent of third-generation sequencing technologies, their accessibility, cost, and time to result limit their use in routine diagnostic applications. Under these circumstances, the designation of the hybrid serovar 9/11 remains a valid approach. Full article
(This article belongs to the Special Issue The Pathogenic Epidemiology of Important Swine Diseases)
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<p>Multiple partial <span class="html-italic">cpsF</span> sequence alignment of serotype 9 (CVJ13261) and serotype 11 (45613) reference strains and representative field isolates from CCA: 125691, 125842, 125941, 126195, and 137928. These field isolates, along with the other CCA isolates (<span class="html-italic">n</span> = 134), did not exhibit the insertion [<a href="#B17-microorganisms-13-00280" class="html-bibr">17</a>] found in the serotype 9 (CV13261) reference strain. Unipro UGENE v50.0 software.</p>
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21 pages, 1718 KiB  
Article
Detection of Lunar Regolith Acquired by Excavator Using Radiofrequency (RF) Sensors
by Krzysztof Kurek, Karol Seweryn, Arkadiusz Tkacz and Gunter Just
Sensors 2025, 25(3), 751; https://doi.org/10.3390/s25030751 (registering DOI) - 26 Jan 2025
Abstract
This paper presents the concept of a radiofrequency (RF) sensor designed to estimate the mass of the regolith acquired by a sampling device or excavator in planetary environments. The sensor utilizes a microstrip line with an open end as the sensing element, with [...] Read more.
This paper presents the concept of a radiofrequency (RF) sensor designed to estimate the mass of the regolith acquired by a sampling device or excavator in planetary environments. The sensor utilizes a microstrip line with an open end as the sensing element, with the mass estimation based on measurements of the phase of the reflection coefficient (S11 of the scattering matrix) for the line immersed in the regolith. The Rotary Clamshell Excavator (RCE) was employed for the experimental evaluation of the sensor’s performance. The RCE successfully passed an environmental test campaign, demonstrating its suitability for future lunar missions. The test results indicate that the RF sensor can estimate the mass of the acquired regolith with reasonable accuracy, approximately 15%, making it a viable solution for rough mass estimation in sampling devices and excavators. Full article
(This article belongs to the Special Issue Sensors for Space Applications)
28 pages, 5117 KiB  
Article
Exploring Anticitrullinated Antibodies (ACPAs) and Serum-Derived Exosomes Cargoes
by Mohammed A. Alghamdi, Sami M. Bahlas, Sultan Abdulmughni Alamry, Ehab H. Mattar and Elrashdy M. Redwan
Antibodies 2025, 14(1), 10; https://doi.org/10.3390/antib14010010 (registering DOI) - 26 Jan 2025
Abstract
Background: Autoantibodies such as rheumatoid factor (RF) and anticitrullinated protein autoantibodies (ACPAs) are useful tools for rheumatoid arthritis (RA). The presence of ACPAs against citrullinated proteins (CPs), especially citrullinated fibrinogen (cFBG), seems to be a useful serological marker for diagnosing RA. RA patients’ [...] Read more.
Background: Autoantibodies such as rheumatoid factor (RF) and anticitrullinated protein autoantibodies (ACPAs) are useful tools for rheumatoid arthritis (RA). The presence of ACPAs against citrullinated proteins (CPs), especially citrullinated fibrinogen (cFBG), seems to be a useful serological marker for diagnosing RA. RA patients’ sera were found to be enriched in exosomes that can transmit many proteins. Exosomes have been found to express citrullinated protein such as cFBG. Objective: We conducted this study in two stages. In the first phase, we aimed to evaluate the association between autoantibodies and risk factors. In the next step, ACPA-positive serum samples from the first phase were subjected to exosomal studies to explore the presence of cFBG, which is a frequent target for ACPAs. Methods: We investigated the autoantibodies in one hundred and sixteen Saudi RA patients and correlated with host-related risk factors. Exosomes were extracted from patients’ sera and examined for the presence of cFBG using monoclonal antibodies. Results: The study reported a high female-to-male ratio of 8:1, and seropositive RA (SPRA) was more frequent among included RA patients. The frequency and the levels of ACPAs were similar in both genders. Autoantibodies incidences have a direct correlations with patient age, while the average titers decreased as the age increased. Further, the highest incidence and levels of autoantibodies were reported in patients with RA duration between 5 and 10 years. Smoking and family history have no impact on autoantibody, except for ACPAs titers among smokers’ RA. Our analysis of serum exosomes revealed that about 50% of SPRA patients expressed cFBG. Conclusions: The female-to-male ratio is 8:1, which is higher than the global ratio. We can conclude that patients’ age and disease duration contribute to the autoantibodies, particularly RF and anti-MCV, whereas smoking and family history had no effects on autoantibodies. We detected cFBG in all exosomes from SPRA patients; thus, we suggest that the precise mechanism of exosomes in RA pathogenesis can be investigated to develop effective treatment strategies. Full article
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<p>(<b>A</b>) Prevalence of positive (RF, anti-CCP, and anti-MCV) in female and male RA patients. The chi-square test was used to compare the frequency of each autoantibody between males and females, and there were no statistically significant differences (<span class="html-italic">p</span> &gt; 0.05). (<b>B</b>) Relationship between the genders and the level of each antibody. Each bar represents the mean, and error bars correspond to 95% confidence intervals. Using unpaired <span class="html-italic">t</span>-test, the concentration of RF showed a statistically significant difference between females and males (** <span class="html-italic">p</span> = 0.004). Abbreviation: RF = Rheumatoid factor, anti-CCP = anti-cyclic citrullinated peptide, anti-MCV = anti-mutated citrullinated vimentin.</p>
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<p>(<b>A</b>) Frequency of autoantibodies among age groups of RA patients. Using chi-square test, significant differences are shown for RF incidence between &lt;40 and &gt;50 years groups (***) and between 40–50 and &gt;50 years groups (**). The anti-MCV prevalence showed a statistically significant difference between &lt;40- and &gt;50-year groups (*). (<b>B</b>) Titers of antibodies among age groups. The one-way ANOVA followed by Tukey’s post hoc test was used to determine the differences in means. Each bar represents the mean, and error bars correspond to 95% confidence intervals. The statistically significant difference in RF level between age groups is shown, where *** <span class="html-italic">p</span> &lt; 0.001; ** <span class="html-italic">p</span> = 0.005.</p>
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<p>(<b>A</b>) Prevalence of autoantibodies in association with the periods of RA duration. No significant difference (<span class="html-italic">p</span> &gt; 0.05) for RF and anti-CCP in all periods. The anti-MCV prevalence showed a statistically significant difference (**) between &lt;5- and 5–10-year groups. (<b>B</b>) Association between antibody levels and the duration of RA. Each bar represents the mean, and the error bars correspond to 95% confidence intervals. One-way ANOVA followed by Tukey’s post hoc test was used to compare the means across each period. The statistically significant difference in the means of anti-MCV level is displayed (** <span class="html-italic">p</span> &lt; 0.01).</p>
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<p>Effect of smoking on autoantibodies. (<b>A</b>) The anti-CCP is significantly (*) frequent in non-smokers (<span class="html-italic">p</span> = 0.003). No significant difference (<span class="html-italic">p</span> &gt; 0.05) for the prevalence of RF and anti-CMCV in both groups. (<b>B</b>) No impact of smoking on the titer of positive antibody (<span class="html-italic">p</span> &gt; 0.05). The comparison was performed using unpaired <span class="html-italic">t</span>-test; each bar represents the mean, and error bars correspond to 95% confidence intervals.</p>
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<p>Association between family history and seropositivity. (<b>A</b>) Autoantibodies prevalence in RA patients with and without family history showed no significant differences (<span class="html-italic">p</span> &gt; 0.05). (<b>B</b>) No relationship between family history and the titer of a positive antibody. Each bar represents the mean, and error bars correspond to 95% confidence intervals. An unpaired <span class="html-italic">t</span>-test was used to compare the difference in means (<span class="html-italic">p</span> &gt; 0.05).</p>
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<p>Summary of exosome morphology by DLS. Zetasizer histograms represent the size distribution by intensity. (<b>A</b>) SPRA; (<b>B</b>) SNRA; (<b>C</b>) HC. (<b>D</b>) Exosomes isolated from SNRA patients revealed a significantly small diameter when compared to SPRA (***) and HC samples (**) (SPRA: seropositive RA patients; SNRA: seronegative RA patients; HC: healthy control individuals).</p>
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<p>TEM images of exosomes using negative staining. Exosomes showed round-shaped vesicles with diameters less than 100 nm; scale bar = 200 nm. Representative TEM micrograph of exosomes isolated from (<b>A</b>) SPRA, (<b>B</b>) SNRA, and (<b>C</b>) HC (SPRA: seropositive RA patients; SNRA: seronegative RA patients; HC: healthy control individuals).</p>
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<p>(<b>A</b>) Protein content of exosome lysates determined by the Pierce detergent-compatible Bradford assay. Significant differences in exosomes content of protein between patients and HC samples (*** <span class="html-italic">p</span> &lt; 0.001). (<b>B</b>) Coomassie blue-stained gel showing protein band separation for exosome lysates from patient and healthy control samples (SPRA: seropositive RA patients; SNRA: seronegative RA patients; HC: healthy control individuals).</p>
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<p>(<b>A</b>) Representative Western blotting of CD9 in exosome sample groups: SPRA, ANRA, and HC. (<b>B</b>) Western blot analysis for the expression of cFBG in exosome lysates that were extracted from SPRA patients. (<b>C</b>) Variation of anti-CCP levels between SPRA patients according to the expression of cFBG in their exosome lysates (*** <span class="html-italic">p</span> &lt; 0.001) (SPRA: seropositive RA patients; SNRA: seronegative RA patients; HC: healthy control individuals; cFBG: citrullinated fibrinogen).</p>
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16 pages, 2668 KiB  
Article
Localization of Capsule Endoscope in Alimentary Tract by Computer-Aided Analysis of Endoscopic Images
by Ruiyao Zhang, Boyuan Peng, Yiyang Liu, Xinkai Liu, Jie Huang, Kohei Suzuki, Yuki Nakajima, Daiki Nemoto, Kazutomo Togashi and Xin Zhu
Sensors 2025, 25(3), 746; https://doi.org/10.3390/s25030746 (registering DOI) - 26 Jan 2025
Abstract
Capsule endoscopy is a common method for detecting digestive diseases. The location of a capsule endoscope should be constantly monitored through a visual inspection of the endoscopic images by medical staff to confirm the examination’s progress. In this study, we proposed a computer-aided [...] Read more.
Capsule endoscopy is a common method for detecting digestive diseases. The location of a capsule endoscope should be constantly monitored through a visual inspection of the endoscopic images by medical staff to confirm the examination’s progress. In this study, we proposed a computer-aided analysis (CADx) method for the localization of a capsule endoscope. At first, a classifier based on a Swin Transformer was proposed to classify each frame of the capsule endoscopy videos into images of the stomach, small intestine, and large intestine, respectively. Then, a K-means algorithm was used to correct outliers in the classification results. Finally, a localization algorithm was proposed to determine the position of the capsule endoscope in the alimentary tract. The proposed method was developed and validated using videos of 204 consecutive cases. The proposed CADx, based on a Swin Transformer, showed a precision of 93.46%, 97.28%, and 98.68% for the classification of endoscopic images recorded in the stomach, small intestine, and large intestine, respectively. Compared with the landmarks identified by endoscopists, the proposed method demonstrated an average transition time error of 16.2 s to locate the intersection of the stomach and small intestine, as well as 13.5 s to locate that of the small intestine and the large intestine, based on the 20 validation videos with an average length of 3261.8 s. The proposed method accurately localizes the capsule endoscope in the alimentary tract and may replace the laborious real-time visual inspection in capsule endoscopic examinations. Full article
(This article belongs to the Special Issue Advances in Optical Sensing, Instrumentation and Systems: 2nd Edition)
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<p>Frames from three capsule endoscopy videos. The intersections between the stomach and small intestine and between the small intestine and colon are indicated by a red dashed line.</p>
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<p>Flowchart of this study including data pre–processing, dataset division, and intersection localization.</p>
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<p>Visualization of the results of <math display="inline"><semantics> <mrow> <mi>C</mi> <mi>P</mi> <mi>V</mi> </mrow> </semantics></math> and K-means algorithm in different gastrointestinal regions. (<b>a</b>,<b>b</b>) use colors to represent the stomach (brown), small intestine (orange), and large intestine (blue). (<b>c</b>) uses stacked bars to show <math display="inline"><semantics> <mrow> <mi>C</mi> <mi>P</mi> </mrow> </semantics></math> values for each region per frame. (<b>d</b>,<b>e</b>) represent the <math display="inline"><semantics> <mrow> <mi>C</mi> <mi>P</mi> <mi>V</mi> </mrow> </semantics></math> using a color gradient, where each square represents a frame and its color intensity correlates with the <math display="inline"><semantics> <mrow> <mi>C</mi> <mi>P</mi> <mi>V</mi> </mrow> </semantics></math> magnitude, indicating the confidence of the model and the prediction of the predominant class.</p>
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<p>Example of our proposed localization algorithm. (<b>a</b>) New composite predict value for each processed frame, obtained from the <math display="inline"><semantics> <mrow> <mi>C</mi> <mi>P</mi> <mi>V</mi> </mrow> </semantics></math> after K-means clustering. (<b>b</b>) First waiting area (WA(1)) and waiting area size. (<b>c</b>) Second waiting area (WA(2)) and waiting area slide size. (<b>d</b>) Final waiting area (WA(Final)) of the video. (<b>e</b>) Waiting area average value (WAAV) for all WAs in a video. WAAV is the key indicator for detecting the intersection of the stomach–small intestine and small intestine–large intestine. (<b>f</b>) Intersection of stomach and small intestine (ISS) and intersection of small intestine and large intestine (ISL). Arrows indicate the ISS and ISL.</p>
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<p>Examples of misclassified frames from capsule endoscopy videos. (<b>a</b>) shows a stomach frame incorrectly classified as the small intestine; (<b>b</b>) shows a stomach frame misclassified as the large intestine; (<b>c</b>) shows a small intestine frame misclassified as the stomach; (<b>d</b>) shows a small intestine frame misclassified as the large intestine; (<b>e</b>) shows a large intestine frame misclassified as the stomach; and (<b>f</b>) shows a large intestine frame misclassified as the small intestine.</p>
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<p>Comparison of the results of localization of organ intersection points in capsule endoscopy videos using different methods. (<b>a</b>) Expert annotations from an experienced endoscopist; (<b>b</b>) Results from the Swin Transformer model; (<b>c</b>) Results combining the Swin Transformer model with the K-means algorithm; (<b>d</b>) Results from combining the Swin Transformer model with the OPLA algorithm; (<b>e</b>) Results combining the Swin Transformer model with both the K-means and OPLA algorithms. Red, yellow, and blue represent the stomach, small intestine, and large intestine, respectively. Yellow and blue arrows indicate the intersections between stomach and small intestine and small intestine and large intestine intersections, respectively. The gradient color bar at the bottom represents the continuous spectrum of organ Swin Transformer, with values ranging from 1 (stomach) to 3 (large intestine).</p>
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17 pages, 2685 KiB  
Article
Beyond Soil Health: The Microbial Implications of Conservation Agriculture
by Kassandra Santellanez-Arreola, Miguel Ángel Martínez-Gamiño, Vicenta Constante-García, Jesús Arreola-Ávila, Cristina García-De la Peña, Quetzaly Karmy Siller-Rodríguez, Ricardo Trejo-Calzada and Erika Nava-Reyna
Diversity 2025, 17(2), 90; https://doi.org/10.3390/d17020090 (registering DOI) - 26 Jan 2025
Abstract
Conservation agriculture (CA) is a sustainable land management approach to improve soil quality while mitigating degradation. Although extensive information regarding the effect of CA on soil properties and microbiome is available, complete studies on the cumulative effect on specific interactions between soil parameters, [...] Read more.
Conservation agriculture (CA) is a sustainable land management approach to improve soil quality while mitigating degradation. Although extensive information regarding the effect of CA on soil properties and microbiome is available, complete studies on the cumulative effect on specific interactions between soil parameters, crop productivity, and microbial communities over time are still lacking, mainly in arid regions. Thus, this study aimed to investigate the effects of no-tillage and residue retention over long- and short-term (24 and 3 years, respectively) periods. Six treatments were established in a maize–oat–triticale system from 1995 in a semiarid region: P + H—plow + harrow; H—harrow; MP—multi-plow (short-term); NT—no-tillage; NT33—NT + 33% residue surface cover (long-term); NT66—NT + 66% residue surface cover. Results indicated that CA improved soil quality by increasing soil organic matter (SOM), total carbon, and glomalin; it also enhanced microbial abundance, particularly fungi, and β-galactosidase activity. Nevertheless, conventional tillage practices led to SOM degradation and reduced crop yields. Principal component analysis revealed distinct groupings of treatments based on soil properties and microbial communities. Furthermore, changes could be detected from the short term. These findings highlight the importance of adopting sustainable agricultural practices to maintain soil health and ensure agricultural productivity in semi-arid regions. Full article
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<p>Geographical location at the Experimental Station of INIFAP in northeastern Mexico (ArcMap 10.4.1).</p>
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<p>Maize mean grain yield (YLD) under different tillage and residue management practices: P + H—plow + harrow; H—harrow; MP—multi-plow; NT—no-tillage; NT33—no tillage + 33% residue surface cover; NT66—no tillage + 66% residue surface cover. Different letters indicate significant differences between the group means of measured parameters determined by Tukey test (<span class="html-italic">p</span> &lt; 0.05).</p>
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<p>Principal component analysis (PCA) of soil properties under six types of tillage: P + H—plow + harrow; H—harrow; MP—multi-plow; NT—no-tillage; NT33—no tillage + 33% residue surface cover; NT66—no tillage + 66% residue surface cover; SOM—soil organic matter; SOC—soil organic carbon; TC—total carbon; CFU—colony-forming units; BAC—total aerobic bacteria; FUN—fungi; BRR—basal respiration rate; POX—peroxidase; PPO—polyphenol oxidase; β-gal—B-galactosidase; YLD—yield; EC—electrical conductivity; pH –potential of hydrogen; T-GRSP—total glomalin-related soil proteins (GRSP); EE-GRSP—easily extractable GRSP; DE-GRSP—difficulty extractable GRSP.</p>
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<p>Graphic representation of bacterial OTUs, asymptote around 10,000. P + H—plow + harrow; H—harrow; MP—multi-plow; NT—no-tillage; NT33—no tillage + 33% residue surface cover; NT66—no tillage + 66% residue surface cover.</p>
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<p>Relative abundance of the main phyla (<b>a</b>) and genera (<b>b</b>) in soils under different tillage practices: P + H—plow + harrow; H—harrow; MP—multi-plow; NT—no-tillage; NT33—no tillage + 33% residue surface cover; NT66—no tillage + 66% residue surface cover. Values in each rectangle represent the percentage of relative abundance of each taxon.</p>
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<p>Redundancy analysis of the most abundant phyla in soils under six types of tillage: P + H—plow + harrow; H—harrow; MP—multi-plow; NT—no-tillage; NT33—no tillage + 33% residue surface cover; NT66—no tillage + 66% residue surface cover; EC—electrical conductivity; pH –potential of hydrogen; T-GRSP—total glomalin-related soil proteins (GRSP); EE-GRSP—easily extractable GRSP; DE-GRSP—difficulty extractable GRSP; FUN—fungi; YLD—yield.</p>
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9 pages, 7320 KiB  
Case Report
A Case Report of an Adenomatoid Tumor of the Fallopian Tube: The Hystopathologic Challenges and a Review of the Literature
by Marcin Jozwik, Katarzyna Bednarczuk, Zofia Osierda, Joanna Wojtkiewicz, Janusz Kocik and Maciej Jozwik
J. Clin. Med. 2025, 14(3), 813; https://doi.org/10.3390/jcm14030813 (registering DOI) - 26 Jan 2025
Abstract
Background: Adenomatoid tumor (AT) is a rare benign neoplasm of mesothelial origin, which mainly occurs in the male and female genital tracts. The most common site for AT occurrence in women is the uterus, which makes the presentation in the fallopian tube(s) [...] Read more.
Background: Adenomatoid tumor (AT) is a rare benign neoplasm of mesothelial origin, which mainly occurs in the male and female genital tracts. The most common site for AT occurrence in women is the uterus, which makes the presentation in the fallopian tube(s) a rarity with an incidence of approximately 0.5%. The reported extragenital sites include serosal surfaces, adrenal glands, and visceral organs, are even less common. Macroscopically, ATs present as white-grayish or yellowish irregular yet circumscribed firm nodules, often containing cystic components. Owing to a vast array of histomorphological growth patterns, ATs tend to mimic malignancy and trigger overresection. Such clinical situations have been described by several studies for the ovaries, uterus, and fallopian tubes, underlining the importance of differential diagnosis in order to avoid superfluous treatment. Methods: Herein, we report a presentation of an AT at the oviductal lumen, detected incidentally during prophylactic bilateral salpingo-oophorectomy in a 67-year-old patient with a BRCA1 mutation. Results: Immunohistochemical staining revealed a positive expression for calretinin, WT1, and cytokeratin 7, and negative expression for both PAX8 and CD34, thus confirming the diagnosis of AT and excluding tubal malignancy. Conclusions: This report, with a concise review of the global literature on tubal AT, brings attention to the solitary and asymptomatic nature of the tumor. With a clear diagnosis, no surgical radicality is necessary. Full article
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<p>Adenomatoid tumor (H&amp;E). (<b>A</b>) upper part-tumor tissue, lower part-tubal mucosa with signs of atrophy (magnification 40×); (<b>B</b>) details of magnified areal marked on (<b>A</b>) with visualized gland-like spaces (magnification 100×).</p>
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<p>Adenomatoid tumor. (<b>A</b>) a highly positive IHC staining for calretinin (magnification 40×); (<b>B</b>) details of magnified areal marked on (<b>A</b>) (magnification 200×).</p>
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<p>Adenomatoid tumor. (<b>A</b>) a positive IHC staining for WT-1 (magnification 40×); (<b>B</b>) a highly positive IHC staining for cytokeratin 7 (magnification 40×).</p>
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