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Search Results (886)

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Journal = Animals
Section = Animal System and Management

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26 pages, 73296 KiB  
Article
Leveraging Thermal Infrared Imaging for Pig Ear Detection Research: The TIRPigEar Dataset and Performances of Deep Learning Models
by Weihong Ma, Xingmeng Wang, Simon X. Yang, Lepeng Song and Qifeng Li
Animals 2025, 15(1), 41; https://doi.org/10.3390/ani15010041 - 27 Dec 2024
Abstract
The stable physiological structure and rich vascular network of pig ears contribute to distinct thermal characteristics, which can reflect temperature variations. While the temperature of the pig ear does not directly represent core body temperature due to the ear’s role in thermoregulation, thermal [...] Read more.
The stable physiological structure and rich vascular network of pig ears contribute to distinct thermal characteristics, which can reflect temperature variations. While the temperature of the pig ear does not directly represent core body temperature due to the ear’s role in thermoregulation, thermal infrared imaging offers a feasible approach to analyzing individual pig status. Based on this background, a dataset comprising 23,189 thermal infrared images of pig ears (TIRPigEar) was established. The TIRPigEar dataset was obtained through a pig house inspection robot equipped with an infrared thermal imaging device, with post-processing conducted via manual annotation. By labeling pig ears within these images, a total of 69,567 labeled files were generated, which can be directly used for training pig ear detection models and enabling the analysis of pig temperature information by integrating the corresponding thermal imaging data. To validate the dataset’s utility, it was evaluated across various object detection algorithms. Experimental results show that the dataset achieves the highest precision, recall, and mAP50 on the YOLOv9m model, reaching 97.35%, 98.1%, and 98.6%, respectively. Overall, the TIRPigEar dataset demonstrates optimal performance when applied to the YOLOv9m algorithm. Utilizing thermal infrared imaging technology to detect pig ear information provides a non-contact, rapid, and effective method. Establishing the TIRPigEar dataset is highly significant, as it allows for a valuable resource for AI and precision livestock farming researchers to validate and improve their algorithms. This dataset will support many researchers in advancing precision livestock farming by enabling an efficient way for pig ear temperature analysis. Full article
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<p>Inspection robot for pig farms. 1: Lifting mechanism for state inspection; 2: information acquisition and control unit; 3: mobile platform; 4: image acquisition component—infrared thermal imager.</p>
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<p>Illustration of thermal infrared imaging for pig ear data collection. The camera’s capture angle was set within 90°, with minor angle adjustments to ensure full coverage of the pigs’ head.</p>
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<p>Data collection workflow for the dataset.</p>
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<p>Examples of thermal infrared images of pigs in the dataset.</p>
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<p>Composition of Pascal VOC, COCO, and YOLO datasets. Pascal VOC labels are saved as .xml files, COCO labels as .json files, and YOLO labels as .txt files.</p>
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<p>Dataset structure.</p>
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<p>Internal structure of training, validation, and test set folders.</p>
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<p>Quality assessment of the pig ear detection dataset. (x, y) represents the center coordinates of the bounding box; width indicates the bounding box width; height represents the bounding box height. The different shades of blue in the figure correspond to the density of the label distribution: deeper shades of blue indicate areas where the labels are more densely concentrated.</p>
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<p>Comparison of accuracy vs. parameter size (<b>left</b>) and latency vs. accuracy (<b>right</b>) using different methods on the pig ear detection dataset.</p>
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<p>Variations in loss values and precision for the RT-DETR and YOLOv5 pig ear detection models.</p>
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<p>Variations in loss values and precision for the YOLOv6 and YOLOv7 pig ear detection models.</p>
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<p>Variations in loss values and precision for the YOLOv8 and YOLOv9 pig ear detection models.</p>
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<p>Variations in loss values and precision for the YOLOv10 pig ear detection model.</p>
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<p>Variations in loss values and precision for the YOLOv11 pig ear detection model.</p>
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<p>Recall and mAP50 variation curves for the YOLOv5 series models.</p>
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<p>Recall and mAP50 variation curves for the YOLOv6 series models.</p>
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<p>Recall and mAP50 variation curves for the YOLOv7 series models.</p>
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<p>Recall and mAP50 variation curves for the YOLOv8 series models.</p>
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<p>Recall and mAP50 variation curves for the RTDETR series models.</p>
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<p>Recall and mAP50 variation curves for the YOLOv9 series models.</p>
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<p>Recall and mAP50 variation curves for the YOLOv10 series models.</p>
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<p>Recall and mAP50 variation curves for the YOLOv11 series models.</p>
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<p>Pig ear detection results of the YOLOv5 series algorithms.</p>
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<p>Pig ear detection results of the YOLOv6 series algorithms.</p>
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<p>Pig ear detection results of the YOLOv7 series algorithms.</p>
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<p>Pig ear detection results of the YOLOv8 series algorithms.</p>
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<p>Pig ear detection results of the RT-DETR series algorithms.</p>
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<p>Pig ear detection results of the YOLOv9 series algorithms.</p>
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<p>Pig ear detection results of the YOLOv10 series algorithms.</p>
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<p>Pig ear detection results of the YOLOv11 series algorithms.</p>
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<p>Thermal infrared pig ear detection model based on YOLOv5.</p>
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<p>Thermal infrared pig ear detection model based on YOLOv6.</p>
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<p>Thermal infrared pig ear detection model based on YOLOv7.</p>
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<p>Thermal infrared pig ear detection model based on YOLOv8.</p>
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<p>Thermal infrared pig ear detection model based on RT-DETR.</p>
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<p>Thermal infrared pig ear detection model based on YOLOv9.</p>
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<p>Thermal infrared pig ear detection model based on YOLOv10.</p>
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<p>Thermal infrared pig ear detection model based on YOLOv11.</p>
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23 pages, 19203 KiB  
Article
Towards Automated Chicken Monitoring: Dataset and Machine Learning Methods for Visual, Noninvasive Reidentification
by Daria Kern, Tobias Schiele, Ulrich Klauck and Winfred Ingabire
Animals 2025, 15(1), 1; https://doi.org/10.3390/ani15010001 - 24 Dec 2024
Viewed by 246
Abstract
The chicken is the world’s most farmed animal. In this work, we introduce the Chicks4FreeID dataset, the first publicly available dataset focused on the reidentification of individual chickens. We begin by providing a comprehensive overview of the existing animal reidentification datasets. Next, we [...] Read more.
The chicken is the world’s most farmed animal. In this work, we introduce the Chicks4FreeID dataset, the first publicly available dataset focused on the reidentification of individual chickens. We begin by providing a comprehensive overview of the existing animal reidentification datasets. Next, we conduct closed-set reidentification experiments on the introduced dataset, using transformer-based feature extractors in combination with two different classifiers. We evaluate performance across domain transfer, supervised, and one-shot learning scenarios. The results demonstrate that transfer learning is particularly effective with limited data, and training from scratch is not necessarily advantageous even when sufficient data are available. Among the evaluated models, the vision transformer paired with a linear classifier achieves the highest performance, with a mean average precision of 97.0%, a top-1 accuracy of 95.1%, and a top-5 accuracy of 100.0%. Our evaluation suggests that the vision transformer architecture produces higher-quality embedding clusters than the Swin transformer architecture. All data and code are publicly shared under a CC BY 4.0 license. Full article
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<p>Dataset overview.</p>
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<p>Data preprocessing pipeline for subsequent re-ID.</p>
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<p>Visibility distributions for all instances of each individual. Ducks and roosters are marked with an asterisk (*).</p>
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<p>Illustration of the training and evaluation process for the feature extractor and classifier, showcasing the linear classifier as an example in this workflow.</p>
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<p>Top-1 accuracy visualized in bar charts. The left bar chart combines the results in <a href="#animals-15-00001-t002" class="html-table">Table 2</a> and <a href="#animals-15-00001-t003" class="html-table">Table 3</a>. The right bar chart illustrates the one-shot experiments in <a href="#animals-15-00001-t004" class="html-table">Table 4</a>.</p>
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<p>Examples of visibility rating “best”, “good”, and “bad”.</p>
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<p>Uniform plumage examples from left to right: solid white, solid black, shades of gray, shades of orange.</p>
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<p>Mean runtime results by experiment type and model (log scale).</p>
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17 pages, 3699 KiB  
Article
Efficient Convolutional Neural Network Model for the Taxonomy and Sex Identification of Three Phlebotomine Sandfly Species (Diptera, Psychodidae, and Phlebotominae)
by Mohammad Fraiwan
Animals 2024, 14(24), 3712; https://doi.org/10.3390/ani14243712 - 23 Dec 2024
Viewed by 298
Abstract
Sandflies, small insects primarily from the Psychodidae family, are commonly found in sandy, tropical, and subtropical regions. Most active during dawn and dusk, female sandflies feed on blood to facilitate egg production. In doing so, they can transmit infectious diseases that may cause [...] Read more.
Sandflies, small insects primarily from the Psychodidae family, are commonly found in sandy, tropical, and subtropical regions. Most active during dawn and dusk, female sandflies feed on blood to facilitate egg production. In doing so, they can transmit infectious diseases that may cause symptoms such as fever, headaches, muscle pain, anemia, skin rashes, and ulcers. Importantly, sandflies are species-specific in their disease transmission. Determining the gender and species of sandflies typically involves examining their morphology and internal anatomy using established identification keys. However, this process requires expert knowledge and is labor-intensive, time-consuming, and prone to misidentification. In this paper, we develop a highly accurate and efficient convolutional network model that utilizes pharyngeal and genital images of sandfly samples to classify the sex and species of three sandfly species (i.e., Phlebotomus sergenti, Ph. alexandri, and Ph. papatasi). A detailed evaluation of the model’s structure and classification performance was conducted using multiple metrics. The results demonstrate an excellent sex-species classification accuracy exceeding 95%. Hence, it is possible to develop automated artificial intelligence-based systems that serve the entomology community at large and specialized professionals. Full article
(This article belongs to the Section Animal System and Management)
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<p>The general steps used to develop the CNN sandfly sexing and taxonomy model.</p>
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<p>Cropped images from the dataset illustrating the pharyngeal and genital regions, featuring both sexes across the three species. (<b>a</b>) <span class="html-italic">Ph. alexandri</span> female genitalia. (<b>b</b>) <span class="html-italic">Ph. sergenti</span> female genitalia. (<b>c</b>) <span class="html-italic">Ph. papatasi</span> female genitalia. (<b>d</b>) <span class="html-italic">Ph. alexandri</span> male genitalia. (<b>e</b>) <span class="html-italic">Ph. sergenti</span> male pharynx. (<b>f</b>) <span class="html-italic">Ph. papatasi</span> male pharynx. (<b>g</b>) <span class="html-italic">Ph. alexandri</span> female pharynx. (<b>h</b>) <span class="html-italic">Ph. sergenti</span> female pharynx. (<b>i</b>) <span class="html-italic">Ph. papatasi</span> female pharynx. (<b>j</b>) <span class="html-italic">Ph. alexandri</span> male pharynx. (<b>k</b>) <span class="html-italic">Ph. sergenti</span> male pharynx. (<b>l</b>) <span class="html-italic">Ph. papatasi</span> male pharynx.</p>
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<p>Cropped images from the dataset illustrating the pharyngeal and genital regions, featuring both sexes across the three species. (<b>a</b>) <span class="html-italic">Ph. alexandri</span> female genitalia. (<b>b</b>) <span class="html-italic">Ph. sergenti</span> female genitalia. (<b>c</b>) <span class="html-italic">Ph. papatasi</span> female genitalia. (<b>d</b>) <span class="html-italic">Ph. alexandri</span> male genitalia. (<b>e</b>) <span class="html-italic">Ph. sergenti</span> male pharynx. (<b>f</b>) <span class="html-italic">Ph. papatasi</span> male pharynx. (<b>g</b>) <span class="html-italic">Ph. alexandri</span> female pharynx. (<b>h</b>) <span class="html-italic">Ph. sergenti</span> female pharynx. (<b>i</b>) <span class="html-italic">Ph. papatasi</span> female pharynx. (<b>j</b>) <span class="html-italic">Ph. alexandri</span> male pharynx. (<b>k</b>) <span class="html-italic">Ph. sergenti</span> male pharynx. (<b>l</b>) <span class="html-italic">Ph. papatasi</span> male pharynx.</p>
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<p>The baseline CNN sandfly identification model. The size of the input to the model is <math display="inline"><semantics> <mrow> <mn>800</mn> <mo>×</mo> <mn>400</mn> <mo>×</mo> <mn>3</mn> </mrow> </semantics></math>.</p>
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<p>An example of a convolution operation. * denotes convolution operator.</p>
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<p>The confusion matrices for the models with 4 filters per layer vs 32 filters per layer, and 200 epochs of training. The matrix is the last result from five-fold cross validation. (<b>a</b>) Four filters per layer. (<b>b</b>) Thirty two filters per layer.</p>
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<p>The confusion matrices resulting from the models with differing numbers of 2-D convolution layers and 200 epochs of training. The matrix is the last result from five-fold cross validation. (<b>a</b>) One layer. (<b>b</b>) Two layers. (<b>c</b>) Four layers. (<b>d</b>) Five layers.</p>
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<p>Grad-Cam maps of the respective images showing the importance of different parts of the images in the classification process. The darker red color means that the model pays more attention (i.e., gives more weight) to that part. (<b>a</b>) <span class="html-italic">Ph. papatasi</span> female Grad-CAM image. (<b>b</b>) <span class="html-italic">Ph. papatasi</span> female fused image. (<b>c</b>) <span class="html-italic">Ph. papatasi</span> male fused image. (<b>d</b>) <span class="html-italic">Ph. papatasi</span> male Grad-CAM image.</p>
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<p>The MCC results from all of the testing folds (i.e., 10 random repetitions of 5-fold cross validation).</p>
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10 pages, 2657 KiB  
Article
Ultrasonographic Measurement of Muscle and Subcutaneous Fat Thickness for the Objective Assessment of the Nutritional Status of Alpacas
by Sonja Franz, Melanie Andrich and Thomas Wittek
Animals 2024, 14(24), 3695; https://doi.org/10.3390/ani14243695 - 20 Dec 2024
Viewed by 292
Abstract
The aim of this study was to evaluate the ultrasonographic measurement of the subcutaneous fat and muscle layers at two different body locations as an objective tool with which to determine the nutritional status of alpacas. The results of ultrasonographic measurement were related [...] Read more.
The aim of this study was to evaluate the ultrasonographic measurement of the subcutaneous fat and muscle layers at two different body locations as an objective tool with which to determine the nutritional status of alpacas. The results of ultrasonographic measurement were related to body weight, determined by scale, and body condition score (BCS), determined by a scoring system. Differences between gender (female/male) and different reproductive statuses (castrated/intact males, pregnant, and early or non-pregnant females) were evaluated. In total, 160 alpacas were examined. Ultrasonography was performed first at the lumbar region, positioning a linear probe (8 MHz) between the second and third lumbar vertebrae perpendicular to the spinal column, and in the gluteal region, measuring the distance between skin, the subcutaneous fat layer, and the muscle layer. The results showed that the gender and pregnancy status of females had a significant influence on the ultrasonographic measurements at both localizations. Significant associations were found between body weight and the BCS. The BCS and ultrasonographic-measured soft-tissue thicknesses at both localizations were significantly associated for males and early or non-pregnant females. According to these results, ultrasonography can be recommended as an objective method with which to determine the nutritional status of alpacas. Full article
(This article belongs to the Section Animal System and Management)
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<p>Position of probe for the ultrasonographic measurement of soft-tissue thickness (skin, fat, and muscle) in the lumbar (US-L) region (a) and in the gluteal (US-G) region (b) in an alpaca.</p>
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<p>Transversal scan (<b>a</b>) of the lumbar region (US-L) between the first and second lumbar vertebrae: the distance (*) between the skin (s), subcutaneous fat (sf), and muscle layer (ml) was measured by using an ultrasonographic measuring device. The soft tissue is framed by the bony-structured transverse process of vertebrae. Transversal scan (<b>b</b>) of the gluteal region (US-G): the distance (*) between the skin (s), subcutaneous fat (sf), and muscle layer (ml) was measured. The muscle is framed by the bony structure of the pelvic bone.</p>
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13 pages, 1433 KiB  
Article
Contributions to More Sustainable and Climate-Resilient Cattle Production: Study of Performance of Galloway and Highland Breeds in Transylvania, Romania
by Mirela Ranta and Anamaria Mălinaș
Animals 2024, 14(24), 3686; https://doi.org/10.3390/ani14243686 - 20 Dec 2024
Viewed by 274
Abstract
Sustainable and climate-resilient livestock systems are increasingly necessary to balance food production demands with environmental conservation. Breeds such as Galloway (Ga) and Highland (Hi) cattle are recognized for their adaptability to extensive grazing systems, low input requirements, and ability to thrive on marginal [...] Read more.
Sustainable and climate-resilient livestock systems are increasingly necessary to balance food production demands with environmental conservation. Breeds such as Galloway (Ga) and Highland (Hi) cattle are recognized for their adaptability to extensive grazing systems, low input requirements, and ability to thrive on marginal lands. Despite their potential, research on the performance of Ga and Hi cattle in low-resource, extensive grazing systems, particularly in Romania, remains scarce. This study evaluated the performance of Ga and Hi beef cattle raised under low-input conditions with a focus on the following: (1) the average daily gain (ADG) on low- and medium-quality forage and (2) the cattle’s adaptability to extensive grazing systems. The study, conducted at Cojocna Farm, Transylvania, Romania (2023–2024), involved five male and three female calves from each breed. Calves were weighed five times in the entire observation period, and feed quality was analyzed. The results showed that Ga calves, especially males, had a higher ADG than Hi calves (Ga = 676.91 g, Hi = 581.14 g), while females showed more consistent performance during winter feeding. Both breeds demonstrated strong adaptability and satisfactory performance under the extensive conditions of Transylvania, as evidenced by the comparison of the obtained ADG with the values provided by the National Breed Register. Future research should explore the long-term sustainability of these breeds in varying environmental conditions, to investigate genetic factors influencing performance, and assess the broader ecological and economic benefits of integrating Galloway and Highland cattle into diverse farming systems. Full article
(This article belongs to the Section Animal System and Management)
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<p>Representative images of original aspects documented during this study: (<b>a</b>) Highland—cows; (<b>b</b>) Highland—calf; (<b>c</b>) Galloway—mother with calf; (<b>d</b>) Galloway—cows.</p>
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<p>Relationship between variables: (<b>a</b>) Highland; (<b>b</b>) Galloway; ADG—average daily gain; CF—crude fiber; F—fat (crude); CP—crude protein; NDF—neutral detergent fiber; ADF—acid detergent fiber; Pearson’s correlation matrix, where size of ellipse is proportional to coefficient value, and crossed “×” indicates not significant at α 0.05.</p>
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12 pages, 257 KiB  
Article
Effects of Substitution of Wheat Straw by Giant Reed on Growth Performance, Serum Biochemical Parameters, Nutrient Digestibility, and Antioxidant Properties of Sheep
by Kai Zhang, Yibo Yan, Rui Zhao, Xianyi Song, Liying Du, Bochi Zhang, Chunlei Yang and Xiaopeng Tang
Animals 2024, 14(24), 3678; https://doi.org/10.3390/ani14243678 - 20 Dec 2024
Viewed by 269
Abstract
The development and utilization of unconventional forage resources is crucial to alleviating the current situation of shortage of forage resources. Giant reed (Arundo donax) is a promising forage resource from the Poaceae family, one of the largest herbaceous plants globally, with [...] Read more.
The development and utilization of unconventional forage resources is crucial to alleviating the current situation of shortage of forage resources. Giant reed (Arundo donax) is a promising forage resource from the Poaceae family, one of the largest herbaceous plants globally, with fast growth, high biomass yield, and strong ecological adaptability. However, there are still very few reports on the use of giant reed in livestock and poultry production. The purpose of this study was to evaluate the effects of adding giant reed instead of wheat straw in total mixed ration (TMR) diets on growth performance, blood biochemical indexes, nutrient digestibility, and antioxidant properties of sheep, thereby providing a theoretical basis for the development and utilization of giant reed herbage resources. A total of 24 fattening sheep (Han × Duper) with similar body weight (20 kg), age (2 months), and health status were randomly divided into four groups with six replicates per group. Sheep in the control group were fed a basal diet (CON), and those in the experimental groups were fed giant reed Lvzhou No. 1 instead of wheat straw, with replacement proportions of 10% (GR10), 20% (GR20), and 30% (GR30) of the total diet, respectively. The results showed that (1) the body weight (FBW) and average daily gain (ADG) of sheep in the GR20 and GR30 groups were higher than those of sheep in the CON and GR10 groups (p < 0.05). Meanwhile, the feed to gain ratio (F/G) of sheep in the GR20 and GR30 groups was lower than those sheep in the CON and GR10 groups (p < 0.05), and the F/G of the GR30 group was lower than that of the GR20 group (p < 0.05). (2) The apparent digestibility of DM and CP in groups GR10, GR20 and GR30 was significantly higher than that in group CON (p < 0.005). The digestibility of NDF and ADF in groups GR20, and GR30 was significantly higher than that in the CON and GR10 groups (p < 0.05). (3) dietary substitution of giant reed for wheat straw had no effect on serum biochemical indices, except serum glucose (GLU, p = 0.014) of sheep. In addition, the substitution of giant reed for wheat straw had a tendency to decrease serum urea content of sheep (p = 0.098). (4) Dietary substitution of giant reed for wheat straw significantly improved serum T-SOD (p < 0.001) and T-AOC (p < 0.001), and significantly decreased MDA (p < 0.001) of sheep. In conclusion, replacing wheat straw with giant reed can significantly enhance growth performance, nutrient digestibility, and antioxidant capacity in sheep without adverse effects on their normal physiological functions. Full article
25 pages, 19201 KiB  
Article
Efficient Cow Body Condition Scoring Using BCS-YOLO: A Lightweight, Knowledge Distillation-Based Method
by Zhiqiang Zheng, Zhuangzhuang Wang and Zhi Weng
Animals 2024, 14(24), 3668; https://doi.org/10.3390/ani14243668 - 19 Dec 2024
Viewed by 259
Abstract
Monitoring the body condition of dairy cows is essential for ensuring their health and productivity, but traditional BCS methods—relying on visual or tactile assessments by skilled personnel—are subjective, labor-intensive, and impractical for large-scale farms. To overcome these limitations, we present BCS-YOLO, a lightweight [...] Read more.
Monitoring the body condition of dairy cows is essential for ensuring their health and productivity, but traditional BCS methods—relying on visual or tactile assessments by skilled personnel—are subjective, labor-intensive, and impractical for large-scale farms. To overcome these limitations, we present BCS-YOLO, a lightweight and automated BCS framework built on YOLOv8, which enables consistent, accurate scoring under complex conditions with minimal computational resources. BCS-YOLO integrates the Star-EMA module and the Star Shared Lightweight Detection Head (SSLDH) to enhance the detection accuracy and reduce model complexity. The Star-EMA module employs multi-scale attention mechanisms that balance spatial and semantic features, optimizing feature representation for cow hindquarters in cluttered farm environments. SSLDH further simplifies the detection head, making BCS-YOLO viable for deployment in resource-limited scenarios. Additionally, channel-based knowledge distillation generates soft probability maps focusing on key body regions, facilitating effective knowledge transfer and enhancing performance. The results on a public cow image dataset show that BCS-YOLO reduces the model size by 33% and improves the mean average precision (mAP) by 9.4%. These advances make BCS-YOLO a robust, non-invasive tool for consistent and accurate BCS in large-scale farming, supporting sustainable livestock management, reducing labor costs, enhancing animal welfare, and boosting productivity. Full article
(This article belongs to the Section Animal System and Management)
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<p>Schematic diagram of the cow data collection setup.</p>
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<p>BCS training and validation data distribution across different scores.</p>
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<p>Star network structure, where FC is the fully connected layer and DW-Conv is the deeply separable convolutional.</p>
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<p>Architecture of the EMA Module, where ‘<span class="html-italic">G</span>’ denotes grouping, ‘<span class="html-italic">X</span> averaging pool’ denotes 1D horizontal global merging, and ‘<span class="html-italic">Y</span> averaging pool’ denotes 1D vertical global merging.</p>
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<p>Architecture of the GN_Conv module.</p>
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<p>Structure of CWD feature-based knowledge distillation.</p>
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<p>Architecture of the BCS-YOLO model.</p>
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<p>Feature map comparison between original and enhanced YOLOv8 at key layers.</p>
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<p>Inference results comparison of different models on the same Image. (<b>a</b>) YOLOv8 model inference results. (<b>b</b>) YOLOv8-Star-EMA-SSLDH model inference results. (<b>c</b>) BCS-YOLO model inference results.</p>
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<p>Comparative loss curves of YOLOv8-C2f-Star with different attention modules.</p>
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<p>Comparison of attention heat maps: (<b>a</b>) before knowledge distillation and (<b>b</b>) after knowledge distillation.</p>
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<p>Impact of motion blur on detection.</p>
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<p>Impact of motion blur on detection.</p>
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19 pages, 7047 KiB  
Article
A Real-Time Lightweight Behavior Recognition Model for Multiple Dairy Goats
by Xiaobo Wang, Yufan Hu, Meili Wang, Mei Li, Wenxiao Zhao and Rui Mao
Animals 2024, 14(24), 3667; https://doi.org/10.3390/ani14243667 - 19 Dec 2024
Viewed by 313
Abstract
Livestock behavior serves as a crucial indicator of physiological health. Leveraging deep learning techniques to automatically recognize dairy goat behaviors, particularly abnormal ones, enables early detection of potential health and environmental issues. To address the challenges of recognizing small-target behaviors in complex environments, [...] Read more.
Livestock behavior serves as a crucial indicator of physiological health. Leveraging deep learning techniques to automatically recognize dairy goat behaviors, particularly abnormal ones, enables early detection of potential health and environmental issues. To address the challenges of recognizing small-target behaviors in complex environments, a multi-scale and lightweight behavior recognition model for dairy goats called GSCW-YOLO was proposed. The model integrates Gaussian Context Transformation (GCT) and the Content-Aware Reassembly of Features (CARAFE) upsampling operator, enhancing the YOLOv8n framework’s attention to behavioral features, reducing interferences from complex backgrounds, and improving the ability to distinguish subtle behavior differences. Additionally, GSCW-YOLO incorporates a small-target detection layer and optimizes the Wise-IoU loss function, increasing its effectiveness in detecting distant small-target behaviors and transient abnormal behaviors in surveillance videos. Data for this study were collected via video surveillance under varying lighting conditions and evaluated on a self-constructed dataset comprising 9213 images. Experimental results demonstrated that the GSCW-YOLO model achieved a precision of 93.5%, a recall of 94.1%, and a mean Average Precision (mAP) of 97.5%, representing improvements of 3, 3.1, and 2 percentage points, respectively, compared to the YOLOv8n model. Furthermore, GSCW-YOLO is highly efficient, with a model size of just 5.9 MB and a frame per second (FPS) of 175. It outperforms popular models such as CenterNet, EfficientDet, and other YOLO-series networks, providing significant technical support for the intelligent management and welfare-focused breeding of dairy goats, thus advancing the modernization of the dairy goat industry. Full article
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<p>Examples of the recording of dairy goats in different scenes: (<b>a</b>) indoor recording; (<b>b</b>) indoor recording at night; (<b>c</b>) outdoor recording on a sunny day; and (<b>d</b>) outdoor recording on a cloudy day.</p>
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<p>Dairy goat shed appearance and camera installation diagram. (<b>a</b>) The installation positions of the outdoor cameras. (<b>b</b>) The layout of the indoor cameras.</p>
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<p>The architecture of GSCW-YOLO. (<b>a</b>) The overall architecture of GSCW-YOLO; (<b>b</b>) the structure of the CARAFE upsampling operator; (<b>c</b>) the specific structure of GCT; (<b>d</b>) the detailed structure of Wise-IoU.</p>
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<p>Comparative visualization results of GSCW-YOLO and other models. (<b>a</b>) Demonstrates the omission of the “drinking” behavior by YOLOv8n, YOLOv7, YOLOv5n, and CenterNet, with GSCW-YOLO accurately identifying it. (<b>b</b>) Highlights overlapping anchor boxes and misclassification of “gnawing” as “scratching” by YOLOv8n, YOLOv7, YOLOv5n, and CenterNet, while GSCW-YOLO achieves precise recognition. (<b>c</b>) Illustrates the accurate identification of “standing” by GSCW-YOLO in a challenging scenario, where YOLOv8n, YOLOv5n, YOLOv7, and CenterNet suffered from misclassification or low confidence.</p>
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<p>The performance of the GSCW-YOLO model under varying lighting conditions. (<b>a</b>) Highlights high detection accuracy in well-lit indoor environments. (<b>b</b>) Demonstrates robust behavior recognition, such as lying and standing, under outdoor sunlight. (<b>c</b>,<b>d</b>) Showcase effective detection of behaviors like lying, standing, and grooming during nighttime, emphasizing the model’s adaptability and reliability in varying lighting conditions.</p>
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<p>Comparative heatmap visualization of YOLOv8n and GSCW-YOLO. (<b>a</b>) The heatmap visualization results of YOLOv8n. (<b>b</b>) The heatmap visualization results of GSCW-YOLO.</p>
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14 pages, 2301 KiB  
Article
Decay of Airborne Bacteria from Cattle Farm Under A-Band Ultraviolet Radiation
by Luyu Ding, Qing Zhang, Ligen Yu, Ruixiang Jiang, Chunxia Yao, Chaoyuan Wang and Qifeng Li
Animals 2024, 14(24), 3649; https://doi.org/10.3390/ani14243649 - 18 Dec 2024
Viewed by 360
Abstract
Inspired by the effects of solar or UV radiation on the decay of airborne bacteria during their transport, this study investigated the effect of UVA on the decay of airborne bacteria from cattle houses and analyzed the potential use of UVA to reduce [...] Read more.
Inspired by the effects of solar or UV radiation on the decay of airborne bacteria during their transport, this study investigated the effect of UVA on the decay of airborne bacteria from cattle houses and analyzed the potential use of UVA to reduce indoor airborne bacteria under laboratory conditions. Airborne bacteria from the cattle source were generated and released into a small-scale test chamber (1.5 m3) with different strategies according to the different objectives in decay tests and simulated sterilization tests. Increasing with the UVA radiation gradients (0, 500, 1000, 1500 μW cm−2), the average decay rate of total curable airborne bacteria ranged from 2.7% to 61.6% in decay tests. Under the combination of different UVA radiation intensities (2000 μW cm−2 in maximum) and radiation durations (60 min in maximum), simulated sterilization tests were conducted to examine the potential use of UVA radiation for air sterilization in animal houses. With the dynamic inactive rate (DIR) ranging from 17.2% to 62.4%, we proved that UVA may be an alternative way to reduce the indoor airborne bacteria in cattle houses if applied properly. Similar effects would be achieved using either a high radiation intensity with a short radiation duration or a low radiation intensity with a long radiation duration. Full article
(This article belongs to the Section Animal System and Management)
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<p>The schematic diagram of the experimental setup.</p>
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<p>Measured decay rates and carrier size of the airborne bacteria aerosolized into the chamber. (<b>a</b>) Decay rates under varied UVA radiation intensities; (<b>b</b>) Size distribution of the generated airborne bacteria (1500 µW cm<sup>−2</sup>).</p>
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<p>Relative influence of the impact factor on the decay rate of airborne bacteria.</p>
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<p>Concentration of airborne bacteria between control and UVA treatment in test chamber. (<b>a</b>) UVA radiation intensity at 1500 μW cm<sup>−2</sup>; (<b>b</b>) UVA radiation intensity at 2000 μW cm<sup>−2</sup>.</p>
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<p>Dynamic inactivation rate (DIR) of airborne bacteria at different radiation intensity and radiation duration of UVA.</p>
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<p>Fitting curve (<b>a</b>) between DIR and radiation intensities of UVA at an irradiation for 60 min, and (<b>b</b>) between DIR and the radiation dose of UVA.</p>
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23 pages, 9340 KiB  
Article
Bridging the Gap Between Computational Efficiency and Segmentation Fidelity in Object-Based Image Analysis
by Fernanda Pereira Leite Aguiar, Irenilza de Alencar Nääs and Marcelo Tsuguio Okano
Animals 2024, 14(24), 3626; https://doi.org/10.3390/ani14243626 - 16 Dec 2024
Viewed by 414
Abstract
A critical issue in image analysis for analyzing animal behavior is accurate object detection and tracking in dynamic and complex environments. This study introduces a novel preprocessing algorithm to bridge the gap between computational efficiency and segmentation fidelity in object-based image analysis for [...] Read more.
A critical issue in image analysis for analyzing animal behavior is accurate object detection and tracking in dynamic and complex environments. This study introduces a novel preprocessing algorithm to bridge the gap between computational efficiency and segmentation fidelity in object-based image analysis for machine learning applications. The algorithm integrates convolutional operations, quantization strategies, and polynomial transformations to optimize image segmentation in complex visual environments, addressing the limitations of traditional pixel-level and unsupervised methods. This innovative approach enhances object delineation and generates structured metadata, facilitating robust feature extraction and consistent object representation across varied conditions. As empirical validation shows, the proposed preprocessing pipeline reduces computational demands while improving segmentation accuracy, particularly in intricate backgrounds. Key features include adaptive object segmentation, efficient metadata creation, and scalability for real-time applications. The methodology’s application in domains such as Precision Livestock Farming and autonomous systems highlights its potential for high-accuracy visual data processing. Future work will explore dynamic parameter optimization and algorithm adaptability across diverse datasets to further refine its capabilities. This study presents a scalable and efficient framework designed to advance machine learning applications in complex image analysis tasks by incorporating methodologies for image quantization and automated segmentation. Full article
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<p>Example of the image pixels. (<b>a</b>) Example of the shape of the image (<b>b</b>). Source: Adapted from Ledda [<a href="#B31-animals-14-03626" class="html-bibr">31</a>].</p>
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<p>Cross, ellipse and rectangle morphology. (<b>a</b>,<b>b</b>) Original image. Sources: (<b>a</b>,<b>b</b>) the authors.</p>
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<p>Image with cross morphology applied (<b>a</b>), image with ellipse morphology applied (<b>b</b>), and image with rectangle morphology applied (<b>c</b>). Sources: (<b>a</b>–<b>c</b>) the authors.</p>
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<p>Flowchart of the overall research procedure. Source: the authors.</p>
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<p>Literature review applied to the studied topics. Source: the authors.</p>
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<p>Schematic of the automated segmentation algorithm. Source: the authors.</p>
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<p>Original image from the UFMG website (<b>a</b>), image preprocessed using OpenCV’s imread function (<b>b</b>), and image preprocessed using BGR model (<b>c</b>). Sources: (<b>a</b>), Adapted from [<a href="#B48-animals-14-03626" class="html-bibr">48</a>] UFMG—Veterinary College (2024); (<b>b</b>,<b>c</b>), created by the authors.</p>
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<p>Images in one channel, original (<b>a</b>) and median-filtered (<b>b</b>). Source: the authors.</p>
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<p>Flowchart of the performed image quantization. Source: the authors.</p>
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<p>Image quantized, original (<b>a</b>) and median-filtered (<b>b</b>). Source: the authors.</p>
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<p>Flowchart of applying the convolution features. Source: the authors.</p>
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<p>The horizontal feature detection of the original image (<b>a</b>) and median filtered (<b>b</b>), the vertical feature detection of the original image (<b>c</b>) and median filtered (<b>d</b>), and the combination of edges of the original (<b>e</b>) and the median filtered (<b>f</b>). Source: the authors.</p>
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<p>Representation of the edge pixel with zero (<b>a</b>) and the resulting center of mass identification in the original (<b>b</b>) and the median filtered (<b>c</b>). Source: the authors.</p>
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<p>Center of mass on a specific feature. Source: the authors.</p>
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<p>Shape of the forehead feature (<b>a</b>,<b>b</b>). Extraction of forehead based on the shape. Sources: (<b>a</b>,<b>b</b>) the authors.</p>
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<p>Morphological shape definition of a feature (<b>a</b>), automated bounding box (<b>b</b>), fulfill segmentation and bounding box options—no (<b>c</b>) and yes (<b>d</b>). Source: the authors.</p>
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<p>The original image (<b>a</b>), the segmentation (<b>b</b>), and the feature segmented (<b>c</b>). Source: the authors.</p>
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<p>Original image of Nelore Cattle (<b>a</b>), centers of mass of the image (<b>b</b>), and the feature segmented (<b>c</b>). Sources: (<b>a</b>) Adapted from [<a href="#B49-animals-14-03626" class="html-bibr">49</a>] Nelore Breeders Association of Brazil (2024) and (<b>b</b>,<b>c</b>), created by the authors.</p>
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<p>Original image of Black Angus (<b>a</b>), centers of mass of the image (<b>b</b>), and the feature segmented (<b>c</b>). Sources: (<b>a</b>) Adapted from [<a href="#B50-animals-14-03626" class="html-bibr">50</a>] Angus (2024) and (<b>b</b>,<b>c</b>), created by the authors.</p>
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27 pages, 920 KiB  
Review
Pre-Harvest Non-Typhoidal Salmonella Control Strategies in Commercial Layer Chickens
by Roshen N. Neelawala, Lekshmi K. Edison and Subhashinie Kariyawasam
Animals 2024, 14(24), 3578; https://doi.org/10.3390/ani14243578 - 11 Dec 2024
Viewed by 789
Abstract
Non-typhoidal Salmonella (NTS) infections in poultry, particularly in commercial-layer chickens, pose a critical risk to food safety and public health worldwide. NTS bacteria can remain undetected in poultry flocks, contaminating products and potentially leading to gastroenteritis in humans. This review examines pre-harvest control [...] Read more.
Non-typhoidal Salmonella (NTS) infections in poultry, particularly in commercial-layer chickens, pose a critical risk to food safety and public health worldwide. NTS bacteria can remain undetected in poultry flocks, contaminating products and potentially leading to gastroenteritis in humans. This review examines pre-harvest control strategies for NTS in layer chickens, including biosecurity protocols, vaccinations, feed additives, genetic selection, and environmental management. These strategies have substantially reduced Salmonella colonization and product contamination rates in the commercial layer industry. By evaluating these strategies, this review highlights the importance of integrated control measures to limit NTS colonization, reduce antimicrobial resistance, and improve poultry health. This review aims to provide producers, researchers, and policymakers with insights into effective practices to minimize Salmonella contamination and enhance both animal and human health outcomes. Full article
(This article belongs to the Special Issue Salmonella and Salmonellosis: Implications in Public Health)
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<p>Transmission pathways of <span class="html-italic">Salmonella</span> in poultry (created with <a href="http://BioRender.com" target="_blank">BioRender.com</a>).</p>
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13 pages, 1557 KiB  
Review
Scoping Review About Salmonella spp. in Colombian Pig Farms from 2009 to Mid-2024
by Adriana Pulido-Villamarín, Iliana Chamorro-Tobar, Ana K. Carrascal-Camacho, Fernando Sampedro, Marcela Rodríguez-Moreno, Fernando Rojas-Bermúdez, Mónica Pérez-Vargas, Ivonne Hernández-Toro, Alejandra Camacho-Carrillo and Raúl A. Poutou-Piñales
Animals 2024, 14(23), 3542; https://doi.org/10.3390/ani14233542 - 8 Dec 2024
Viewed by 633
Abstract
In Colombia, research on Salmonella concerning animal health, veterinary diagnostics, and epidemiology within the primary production chain is limited. This study aimed to analyze the published data about Salmonella in the Colombian primary pig production chain from 2009 to mid-2024. This involved an [...] Read more.
In Colombia, research on Salmonella concerning animal health, veterinary diagnostics, and epidemiology within the primary production chain is limited. This study aimed to analyze the published data about Salmonella in the Colombian primary pig production chain from 2009 to mid-2024. This involved an exploratory literature review using systematic search strategies, including articles, graduate studies, conference presentations, and technical reports from the selected period. Of the 35 studies reviewed, 30 met the inclusion criteria, with eleven being from the grey literature. The pooled prevalence of Salmonella spp. on Colombian farms was 8.9%, while the seroprevalence ranged from 27 to 40%. Risk factors associated with the presence of this bacterium on farms included aspects such as water sources, pest control, the farm type, and management practices. Few scientific publications address the presence of this pathogen in primary pig production in Colombia, underscoring the need to raise awareness within the academic and production communities about the importance of conducting and reporting new studies and cases. Full article
(This article belongs to the Special Issue Salmonella and Salmonellosis: Implications in Public Health)
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<p>PRISMA flowchart of the procedure for the selection of the studies analyzed.</p>
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<p>Swine salmonellosis is an infectious pathological condition reported in Colombia, according to the parameters of several affected farms and its incidence and mortality.</p>
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<p>Estimation of <span class="html-italic">Salmonella</span> spp. prevalence (P) in Colombian pig farms (the percentage weight is in the order 3.5; 2.8; 55.6; 13.2; 2.7, and 1.7 and an overall value of 100.0) [<a href="#B16-animals-14-03542" class="html-bibr">16</a>,<a href="#B17-animals-14-03542" class="html-bibr">17</a>,<a href="#B35-animals-14-03542" class="html-bibr">35</a>,<a href="#B36-animals-14-03542" class="html-bibr">36</a>,<a href="#B37-animals-14-03542" class="html-bibr">37</a>,<a href="#B38-animals-14-03542" class="html-bibr">38</a>,<a href="#B39-animals-14-03542" class="html-bibr">39</a>].</p>
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<p>Estimation of <span class="html-italic">Salmonella</span> spp. seroprevalence (SP) in Colombian pig farms [<a href="#B3-animals-14-03542" class="html-bibr">3</a>,<a href="#B16-animals-14-03542" class="html-bibr">16</a>,<a href="#B37-animals-14-03542" class="html-bibr">37</a>,<a href="#B38-animals-14-03542" class="html-bibr">38</a>] 2014.</p>
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<p>Map of prevalence (P) and seroprevalence (SP) against <span class="html-italic">Salmonella</span> spp. as reported in primary production throughout the national territory from 2009 to mid-2024 [<a href="#B3-animals-14-03542" class="html-bibr">3</a>,<a href="#B16-animals-14-03542" class="html-bibr">16</a>,<a href="#B17-animals-14-03542" class="html-bibr">17</a>,<a href="#B35-animals-14-03542" class="html-bibr">35</a>,<a href="#B36-animals-14-03542" class="html-bibr">36</a>,<a href="#B37-animals-14-03542" class="html-bibr">37</a>,<a href="#B38-animals-14-03542" class="html-bibr">38</a>,<a href="#B39-animals-14-03542" class="html-bibr">39</a>].</p>
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13 pages, 1701 KiB  
Article
Enteric Methane Emission from Cattle Grazing Systems with Cover Crops and Legume–Grass Pasture
by José Ignacio Gere, Silvina Beatriz Restovich, Juan Mattera, María Isabel Cattoni, Abimael Ortiz-Chura, Gabriela Posse and María Esperanza Cerón-Cucchi
Animals 2024, 14(23), 3535; https://doi.org/10.3390/ani14233535 - 7 Dec 2024
Viewed by 780
Abstract
This study aims to quantify enteric methane (CH4) emission and dry matter intake (DMI) in beef steers under two rotational grazing systems: (i) a mixture of cover crops (vetch + ryegrass + forage radish) (CC) and (ii) alfalfa and fescue pasture [...] Read more.
This study aims to quantify enteric methane (CH4) emission and dry matter intake (DMI) in beef steers under two rotational grazing systems: (i) a mixture of cover crops (vetch + ryegrass + forage radish) (CC) and (ii) alfalfa and fescue pasture (AFP). Eighteen Hereford steers were divided into two groups (nine steers per group), assigned to either the CC or AFP. Methane emissions were measured using the SF6 tracer technique. The results showed that steers grazing CC produced 29% less CH4 in g/d compared to those on the AFP (119.1 vs. 167.1 g/d for CC and AFP, p < 0.05) and 36% less CH4 yield (4.3 vs. 6.7% of gross energy intake). However, average daily gain (ADG), DMI, and CH4 intensity (gCH4/kg ADG) did not significantly differ between treatments. The integration of CC in a cattle grazing system has the potential to reduce CH4 emissions by improving forage quality. Full article
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<p>Images of the two systems evaluated: a cover crop mixture with annual ryegrass, hairy vetch, and a forage radish (CC) (<b>left</b>); and an alfalfa-fescue pasture (AFP) (<b>right</b>).</p>
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<p>Animals in the experiment with equipment set up for monitoring enteric methane emissions using the SF<sub>6</sub> tracer technique. Two sample collection systems are placed for each animal inside the blue corrugated tube, which serves to contain the equipment, and the tube is secured to the muzzle.</p>
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<p>Relationship between methane emission intensity (gCH<sub>4</sub>/kg ADG) and averaged daily gain (ADG) for Hereford steers from CC (white squares) and from AFP (black circles) treatments.</p>
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12 pages, 5150 KiB  
Article
Integron-Mediated Antimicrobial Resistance and Virulence Factors in Salmonella Typhimurium Isolated from Poultry
by Elizabeth Kim, Nora Jean Nealon, Katherine A. Murray, Cydney Jardine, Roberta Magnuson and Sangeeta Rao
Animals 2024, 14(23), 3483; https://doi.org/10.3390/ani14233483 - 2 Dec 2024
Viewed by 1086
Abstract
This study investigates antimicrobial-resistant (AMR) Salmonella Typhimurium in poultry, focusing on how class I integrons contribute to AMR and virulence. Using whole genome sequencing, researchers analyzed 26 S. Typhimurium isolates from U.S. poultry, finding that three isolates contained integrons (1000 base pairs each). [...] Read more.
This study investigates antimicrobial-resistant (AMR) Salmonella Typhimurium in poultry, focusing on how class I integrons contribute to AMR and virulence. Using whole genome sequencing, researchers analyzed 26 S. Typhimurium isolates from U.S. poultry, finding that three isolates contained integrons (1000 base pairs each). These integron-positive isolates exhibited significantly higher resistance to beta-lactams, phenicols, and tetracyclines compared to integron-free isolates (p = 0.004, 0.009, and 0.02, respectively) and harbored genes like ges, imp, and oxa, which are linked to extended-spectrum beta-lactamase resistance. Most AMR gene classes (64%) were chromosome-based, with integron-positive isolates showing a broader array of resistance genes, including catB and tetA. Integron-bearing isolates had higher occurrences of bacteriocin genes and specific AMR genes like aminoglycoside and beta-lactam resistance genes, while integron-free isolates had more fimbrial and pilus genes. The presence of integrons may trend with increased AMR genes and virulence factors, highlighting the role of integron screening in enhancing AMR surveillance and reducing the need for high-priority antimicrobial treatments in poultry. These findings could support better AMR stewardship practices in poultry production, potentially lowering infection risks in humans and livestock. Full article
(This article belongs to the Special Issue Salmonella and Salmonellosis: Implications in Public Health)
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<p>Distribution of antimicrobial resistance genes identified on the chromosome of <span class="html-italic">S</span>. Typhimurium isolated from poultry (n = 26) grouped by presence or absence of integrons. Rows are grouped by antimicrobial resistance gene classes. Each column shows the gene profile of an individual <span class="html-italic">S</span>. Typhimurium isolates. Each box shows one gene. Red boxes indicate gene presence, and yellow boxes indicate that the gene was not detected in the individual <span class="html-italic">S</span>. Typhimurium isolate. Abbreviations: I = Integron Present; NI = Integron Absent.</p>
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<p>Distribution of antimicrobial resistance genes identified on the plasmid of <span class="html-italic">S</span>. Typhimurium isolated from poultry (n = 26) grouped by presence or absence of integrons. Rows are grouped by antimicrobial resistance gene classes. Each column shows the gene profile of an individual <span class="html-italic">S</span>. Typhimurium isolates. Each box shows one gene. Red boxes indicate gene presence, and yellow boxes indicate that the gene was not detected in the individual <span class="html-italic">S</span>. Typhimurium isolate. Abbreviations: I = Integron Present; NI = Integron Absent.</p>
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<p>Distribution of antimicrobial resistance gene class prevalences when comparing <span class="html-italic">S</span>. Typhimurium isolates with versus without integrons. Blue bars represent isolates with integrons (n = 3), and green bars represent isolates without integrons (n = 23). Panel (<b>a</b>) shows gene class distribution prevalences on the chromosome, and (<b>b</b>) shows gene class distributions on the plasmid. Prevalences were compared between isolates with and without integrons using Fisher’s exact test, and significance was defined as <span class="html-italic">p</span> &lt; 0.05. Significance is denoted with an *.</p>
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<p>Distribution of virulence factor genes identified on the chromosome (<b>a</b>) and plasmid (<b>b</b>) of <span class="html-italic">S</span>. Typhimurium isolated from poultry (n = 26) grouped by presence or absence of integrons. Rows are grouped by antimicrobial resistance gene classes. Each column shows the gene profile of an individual <span class="html-italic">S</span>. Typhimurium isolates. Each box shows one gene. Red boxes indicate gene presence, and white boxes indicate that the gene was not detected in the individual <span class="html-italic">S</span>. Typhimurium isolate. Abbreviations: I = Integron Present; NI = Integron Absent.</p>
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<p>Distribution of virulence factor gene class prevalences when comparing <span class="html-italic">S</span>. Typhimurium isolates with versus without integrons. Blue bars represent isolates with integrons (n = 3), and green bars represent isolates without integrons (n = 23). Panel (<b>a</b>) shows gene class distribution prevalences on the chromosome, and (<b>b</b>) shows gene class distribution prevalences on the plasmid. Abbreviations: LPS = Lipopolysaccharide; T3SS = Type 3 secretion system; T5SS = Type 5 secretion system; T6SS = Type 6 secretion system. Prevalences were compared between isolates with and without integrons using Fisher’s exact test, and significance was defined as <span class="html-italic">p</span> &lt; 0.05.</p>
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15 pages, 447 KiB  
Article
Awareness of Poultry Farmers of Interconnected Health Risks: A Cross-Sectional Study on Mycotoxins, Biosecurity, and Salmonellosis in Jimma, Ethiopia
by Tadele Kabeta, Tadele Tolosa, Alamayo Nagara, Ilias Chantziaras, Siska Croubels, Filip Van Immerseel and Gunther Antonissen
Animals 2024, 14(23), 3441; https://doi.org/10.3390/ani14233441 - 28 Nov 2024
Viewed by 1133
Abstract
Poultry farming in Ethiopia is crucial for food security and income, but it faces significant challenges due to gaps in farmer awareness. A cross-sectional study was conducted using the Biocheck.UGent™ biosecurity scoring system and a questionnaire to evaluate poultry farmers’ basic and practical [...] Read more.
Poultry farming in Ethiopia is crucial for food security and income, but it faces significant challenges due to gaps in farmer awareness. A cross-sectional study was conducted using the Biocheck.UGent™ biosecurity scoring system and a questionnaire to evaluate poultry farmers’ basic and practical knowledge concerning salmonellosis and mycotoxins. The questionnaire revealed substantial gaps in basic and practical knowledge regarding Salmonella spp infections and mycotoxin among 38 poultry farmers in Jimma. About 68.4% of farmers were unaware of the impact of salmonellosis on both poultry and human health. Moreover, 78.9% had limited basic knowledge of how salmonellosis affects production and the economy. Farmers also showed limited practical knowledge of farm management and hygiene practices essential for preventing Salmonella spp. infections. Regarding mycotoxins, 63.2% of farmers lacked awareness of poultry feed management, 60.5% were unaware of the health risks mycotoxins pose, and 73.7% did not recognize signs of mycotoxin contamination. Although 55.3% of farmers demonstrated acceptable practical knowledge of strategies to reduce the impact of mycotoxin contaminations, there are still concerns, particularly since 65.8% and 55.3% only showed moderate practical knowledge of feed storage and mycotoxin prevention, respectively. The overall biosecurity scores of poultry farms were below the global average, with a score of 41.7 compared to the worldwide average of 64. The overall mean score for external biosecurity was 44.9, below the global average of 63. All 3 scoring platforms and biosecurity parameters indicated that internal biosecurity was the weakest aspect, with a score of 31.6, well below the global standard of 64. The results showed a weak correlation (rₛ = 0.06) between farmers’ basic and practical knowledge scores about Salmonella spp. infections and mycotoxins. Similarly, there was a weak correlation between the poor biosecurity score of poultry farms and the basic and practical knowledge of poultry farmers on Salmonella spp. infections (rₛ = 0.17) and mycotoxins (rₛ = 0.25). In conclusion, the study found that poultry farmers in Jimma had poor basic and practical knowledge scores on Salmonella, mycotoxins, and biosecurity measures. Thus, awareness creation is paramount to improve these gaps to reduce the impact of mycotoxin contamination and poultry diseases and consequently to improve food security and food safety. Full article
(This article belongs to the Section Animal System and Management)
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<p>Distribution of poultry farms by kebele in Jimma.</p>
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