| Entry |
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| Name |
(RefSeq) histone deacetylase 6-like isoform X1
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| KO |
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| Organism |
srx Sinocyclocheilus rhinocerous
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| Brite |
KEGG Orthology (KO) [BR:srx00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:srx01009]
107727426
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:srx03019]
107727426
04131 Membrane trafficking [BR:srx04131]
107727426
03036 Chromosome and associated proteins [BR:srx03036]
107727426
Enzymes [BR:srx01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107727426
Protein phosphatases and associated proteins [BR:srx01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107727426
Messenger RNA biogenesis [BR:srx03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107727426
Membrane trafficking [BR:srx04131]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107727426
Chromosome and associated proteins [BR:srx03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107727426
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1091 aa
MDPVPDSKGSTRSPRGTSETKRENNNPNQKKNLQEARRKGRMDRSKEEEEMSNELKNLDV
RGKTKATGTGLVYVDAFTRFHCLWDASHPECPARVSAVMEMLETEGLLGRCVQVEARAVS
EDELLLVHTKAYVELMKSTQKMTEEELKTLAHKYDSVYLHPEFFASACLAVGSVLQLVDK
VMTSQLRNGFSINRPPGHHAHADKMNGYCMFNNLAIAARYAQKQHGVKRVLIVDWDVHHG
QGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKIGMEDG
DYVTAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMRVSPQCFSILTHMLKGVAQGR
LVLALEGGYNLQSTAEGVCASVRSLLGDPCPHLTSPGDPSESALKSISESISALYPFWKS
LQTFEGGPLSDVTPLPAPVCAEVKVSSPITGLVYDQRMMLHHNMWDGHHPELPQRISRIF
CRHEELGLLSRCLQIPARLATEEELALCHSSEHISTIKSTEHMKPRDLHRLGNDYNSIYI
CNESYTCALMAAGSCFNSVQAIITGHVRNGVAIVRPPGHHAEKDTACGFCFFNTAALTAR
YAQSITHESLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFPSSEDANYDKV
GQGKGTGYNVNIPWNGGKMGDPEYMAAFHHIVMPIAREFAPELVLVSAGFDAARGDPLGG
YQVTPEGYAHLTHQLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPPSLDHLPP
PKTSATVTINNVLRAHVPFWSSLRIQIPESLRLALPSPKSKGKRASAGKSKKSPRQSTQS
PGQTPQHLEESGLDELSKDLLSLNLNTSTSSNPSPASVPIGGARRKVKPNPQRDSAGRES
DSPLKLKSEKARVGDGTHAEITAVKAETPDRTIPESVVSGKSAAVDDQESSVLEAAGGHT
TMMSVLQSVFGAQATDLDTMYVVDPLSWCPHLESVRPVPAGGIDVFLPCEECGGDTENWI
CLFCHKVLCGRYVKQHMVTHGQVSGHPMVLSFADLSVWCYACESYVHNKVLHEAKSAAHL
VKFGEEIPPFS |
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| NT seq |
3276 nt +upstreamnt +downstreamnt
atggatcccgttccagattccaaaggttctactcgatcaccgagaggaacatctgaaacc
aaaagagaaaacaacaatccgaaccagaagaagaatctacaggaggcgcggaggaagggc
agaatggatcggagcaaagaggaggaggagatgagcaatgaactcaaaaacttggatgtt
cgtggtaagactaaagcaacaggaacaggtctcgtctacgtagatgcctttactcgcttt
cactgcctctgggatgccagtcacccggagtgtccagcaagagtgagcgctgtgatggag
atgctggagacggaaggtctgctgggacgctgcgtacaagtagaggccagagctgtgtca
gaagatgagctgttactcgttcatacgaaggcgtatgtagagctgatgaaatccacacag
aaaatgacagaggaggagctgaaaactttggctcataaatatgattctgtctacctgcat
cctgaatttttcgcctccgcctgtctggcggtgggatcagttctccagctggtggataaa
gtgatgacatcacagctgcgtaacggcttctccatcaacaggcctcctggtcaccatgct
catgcagataagatgaatggctactgtatgtttaataatctggccatagcagcgcgctac
gcacagaagcagcatggagttaaacgagttctgattgtggattgggatgtgcatcacgga
cagggaatccagtatatttttgaagaggatcccagtgtgctgtatttctccgtgcacaga
tatgaagacggctcgttctggccgcatctcaaggagtctgacagcagttcggtgggttca
ggagcaggacagggctacaatatcaacctgccctggaacaagatagggatggaggatgga
gattacgtcacagctttccagcagctcctgcttccagtggcgtatgagtttcagcctcag
ctggtgttagtggcggctggctttgactctgtgattggtgacccaaagggtgagatgcga
gtgagtccacagtgtttctccatcctgacccacatgctgaaaggtgtagcacagggtcga
ctcgtgctggctcttgagggtggatataacctccagtccacagcagagggtgtttgtgct
agtgtgaggtcactgctgggtgacccttgccctcatctgacctctcctggcgatccgagt
gaaagtgctctgaagtccatctcagagtccatctcagccttgtatccattttggaagagt
cttcagacttttgagggtggtcctctgtctgatgtcactcccctgcccgctccagtgtgt
gcagaagtgaaggtttcctctccgatcactgggctggtttacgaccagagaatgatgctt
catcacaacatgtgggatggtcatcatccagagctccctcagagaatttctcgcatcttt
tgccggcatgaggagctgggtctgctgtcccgttgccttcagataccagctcgcctagca
acagaagaagagctggcactctgtcacagttctgagcatataagcactataaagagtaca
gagcacatgaaacccagagatctgcaccgtctgggaaacgattacaactccatctacatc
tgtaatgagagctacacctgcgccctgatggccgcagggtcgtgttttaactctgtacag
gccataatcacaggccacgtgagaaatggcgtggccatagtccgtcctcccggtcatcat
gcagagaaagacacagcttgtggtttctgtttctttaatacggctgctttgaccgcacgc
tatgcccagagcatcactcacgaatccctgcgtgtcctcatcctggattgggatgttcac
catggaaacggcacacagcacatctttgaggaggatgacagtgttctgtacatctccctg
catcgctacgaagacgggacattcttccccagttcagaggatgctaactatgacaaggtg
gggcaggggaagggcacaggatacaatgtcaacatcccctggaatggaggaaagatggga
gacccagaatacatggcggctttccatcacatagtgatgccgatagccagagagtttgcc
ccagagctggtgctggtgtctgctgggtttgatgcagcacgaggtgatccgttaggaggg
tatcaggtgaccccagagggctacgctcacctcacccatcagttaatgagcctggctgca
ggaagagtgctagtcatactggagggaggatataacctcacctccatctctgagtcaatg
tccatgtgcaccagtatgttgctgggagactctcctccgtctctagaccatctgccccct
ccgaagaccagcgccactgttaccattaacaatgtcttgcgtgcacacgtccccttttgg
agctccttgagaatacagattccagagtcacttcgtttggctttgccgtctcctaaatcg
aaaggcaagcgggcatcagcgggcaagagcaagaaatctcctcgccagtccacccagagt
cctggacagacaccgcagcatcttgaggaatccggccttgatgagctcagtaaggacctg
ctctctctgaatctcaacacaagtacctcatctaaccccagcccagcgtctgtccccatt
ggaggagccagacggaaggtgaaacccaacccacagagggattcggcaggccgggagtca
gattcacccctaaaactcaagtcagagaaagccagagttggagatggcacgcatgcagag
attacagctgtaaaagcagagacacctgaccggacaatcccagagtctgtggtctctgga
aagtcagctgccgtggatgatcaggagagttcagtgctggaagctgctggtggtcacacc
actatgatgtcagtcttacaaagtgtctttggagcacaagccacggatttggacaccatg
tatgtggtggacccgttgtcatggtgcccacacttggagtcagtgcgaccggtgcccgca
ggtggcatcgatgtcttcctgccgtgtgaagagtgtggaggggatacagaaaactggatc
tgcctcttctgccacaaggtgctctgcgggcgttatgtgaagcagcacatggtgacccac
gggcaggtgtcgggtcaccctatggtgctgagcttcgctgacctttctgtctggtgctac
gcttgtgagtcatacgtccacaacaaggtgctccatgaagccaaaagtgctgctcacctt
gtgaagtttggagaggagattcctcctttcagctga |
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