| Entry |
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| Name |
(RefSeq) histone deacetylase 15-like isoform X1
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| KO |
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| Organism |
sbi Sorghum bicolor (sorghum)
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| Brite |
KEGG Orthology (KO) [BR:sbi00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:sbi01009]
110432512
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:sbi03019]
110432512
04131 Membrane trafficking [BR:sbi04131]
110432512
03036 Chromosome and associated proteins [BR:sbi03036]
110432512
Enzymes [BR:sbi01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110432512
Protein phosphatases and associated proteins [BR:sbi01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110432512
Messenger RNA biogenesis [BR:sbi03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110432512
Membrane trafficking [BR:sbi04131]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110432512
Chromosome and associated proteins [BR:sbi03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110432512
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(4103729..4115614)
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| AA seq |
634 aa
MASDMRAPSSGKKSETSHGMKCGVSDQACHGKCQSCDIAAKPICSGVDGVSSLTGSHTDV
KASKENCGACSLNNDRADSLEEEVKGSTARIGHVESADPDGCVDVKKESFMAVDDLPQEF
EGEQVGATLEDLFFFNGEEEDDSDWEPASRLVEDRWFCFNCTMPIVDQITHCMNCRELKE
SAVDGYDVFKKQIAQTALLSADTELLPVSTAIGFDERMLLHSEQLEVKPNPHPERPDRLR
AIAASLAAAGIFPSKCALVPPREITKEELLMVHSPDHIESVEQTKNMLYSYFTSDTYANG
HSACAAKLAAGLCADLASLMVSGRVRNGFALVRPPGHHAGVKQAMGFCLHNNAAVAALAA
KRAGAKKVLIVDWDVHHGNGTQEIFEGDKTVLYISLHRHEDGNFYPGTGAAHEVGVLDGQ
GFSVNIPWSRGGVGDNDYIFAFQTVVLPIAAEFAADITIISAGFDAARGDPLGGCDVTPV
GYSWMTSLLADCSNGRLLVILEGGYNLQSISSSATEVVKVLLGDGPNRASFVGSPSREAL
KTVSQVLKIQQRFWPVLGPTYASLQAQQGSVSSNHITKRNELKKRKHSGGLGPFWWKLGS
KRLLYEALFEHRRQRKIKGSGEGKATGFSSTLDG |
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| NT seq |
1905 nt +upstreamnt +downstreamnt
atggcatctgatatgagagcacctagcagtggcaaaaagagtgagacctcccatggcatg
aagtgtggggtctctgatcaagcttgtcatggcaaatgccaaagctgtgacattgctgca
aaacctatttgttctggagtggatggagtctcctcgttgactggtagtcatactgatgtg
aaggcctcaaaagagaactgtggagcatgcagtctgaacaatgatcgtgctgattcttta
gaagaagaggtaaagggttccacagcgaggataggtcatgttgagagtgctgatcctgat
ggctgtgtggatgtaaaaaaggaaagtttcatggctgttgatgatctaccacaggagttt
gagggggagcaagttggggcaacactggaggatctgtttttctttaatggtgaagaggaa
gatgacagtgattgggaacctgctagtcgccttgttgaggatagatggttttgctttaac
tgcacaatgccgattgtggaccagattacacattgcatgaattgccgtgagcttaaggaa
tctgcagtagatggatatgatgttttcaaaaaacaaattgcacagacagctttgttatct
gccgacacagagttgctgccagtatctacagcgattggttttgatgaaagaatgctgctc
cacagtgagcagctagaagttaaaccaaatccgcatccagaaagaccggatcgccttcgc
gccattgctgcaagtcttgctgctgcagggatctttccctcaaaatgtgctttggtacct
cctcgagaaatcacgaaggaggaactccttatggttcatagtccagaccacattgaaagt
gtcgagcagacaaagaacatgctttacagttacttcacttcggatacttatgcaaatgga
cattcagcatgtgctgccaaacttgcagctggattatgtgctgatcttgctagtttgatg
gtatctgggcgtgttcgtaatggttttgctctggtaagacctcctgggcatcatgcaggg
gtgaagcaagcaatgggtttttgtcttcacaacaatgcagcagtggctgctttagctgca
aaaagagcaggtgccaagaaagtcctcatagttgactgggatgtgcaccatggaaatggc
acacaagagatattcgaaggggataaaacagtcttgtacatatcattacatcgtcatgag
gatggaaacttttaccctggaactggagcagctcatgaggtgggagttctggatggtcaa
ggattctcagttaatataccttggagccgtggtggtgttggagacaatgactacatcttt
gcttttcagactgtggtgcttccaatagctgcagagtttgccgcagacatcactataata
tctgcaggattcgatgcagctagaggtgaccctctaggtggttgtgatgtcactccagtt
ggatactcttggatgacatccctgctagctgattgctcaaatggaagattgttggtgata
cttgagggaggatacaatctccagtcgatatcctcatcagctactgaagttgttaaggtc
ctacttggggatggtccaaatcgtgcttcatttgtaggttcaccatcaagagaggccttg
aagactgtttctcaagtcctgaagattcaacaacgattttggccagttttaggtccaaca
tatgcatcactacaggcacagcaggggtcggtttcttccaatcatatcaccaaacgtaat
gagctgaagaaaaggaagcattcaggaggattagggcccttctggtggaagttgggaagc
aaaaggcttctgtacgaagcgctttttgagcaccgtcgtcagaggaaaatcaaggggtcc
ggagaaggaaaagcaactggtttcagcagtaccttagatgggtag |
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