| Entry |
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| Name |
(RefSeq) histone deacetylase 6 isoform X1
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| KO |
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| Organism |
niq Nymphalis io (European peacock)
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| Brite |
KEGG Orthology (KO) [BR:niq00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:niq01009]
126769896
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:niq03019]
126769896
04131 Membrane trafficking [BR:niq04131]
126769896
03036 Chromosome and associated proteins [BR:niq03036]
126769896
Enzymes [BR:niq01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
126769896
Protein phosphatases and associated proteins [BR:niq01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126769896
Messenger RNA biogenesis [BR:niq03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126769896
Membrane trafficking [BR:niq04131]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
126769896
Chromosome and associated proteins [BR:niq03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
126769896
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:complement(12864798..12877209)
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| AA seq |
1107 aa
MSDPPSAQTRRSAGELKKTPPSSVVTRNGARKAKIQTRAMSAGVKPSASLLAAKKKAQQK
KKQAVDTILRDPYQIAMESKLKMKGPTGFVSEPRMAEHRCLWDDKYPECPERLISVINRC
KELNLIEQCKVLTPRAATREEIETLHSPAIIDMLESTHQNNDVEYLEDLSSKYDAIYIHP
STHELALIAAGSTLELVSRVVSGELQNGAAFVRPPGHHAMRAEPCGYCFYNNVALAARHA
LQLGVERILIIDWDVHHGQATQQMFYDDPRVVYFSIHRYEHGSFWPNLRQADFHYTGSGA
GEGYNFNVPLNCTGMKDADYLAIWHQLLLPMALEFSPQLVLISAGYDSALGDEKGEMEVS
PACYAWLTQQVCAVCARVCVVLEGGYCPAALAEGAALTLRALLALPAPVAPAPAAPAPPA
EPCDQIRESILNCIYAHKKHWRCFNYQPTYSTGPTPNVCDGQKVKHTVRVRWEGDETRPE
RFATRDCYPLQDDRTKREIRERLNHLRLVTELPLPEPVCYVYDQAMLKHKNICEPGHVEC
PERIMRIHERLRDFGLLERLQRIEARRATDEEILAVHTRKHLDRLKELSSTKLRDLNSQK
DAYDSVYFHPDTFESASIASGCVLQVVERVAGGRGGRGACAVRPPGHHAAADAPSGFCVL
NNAAVGAVHAVRALGLRRVLLVDWDVHHGNGTQSLLYDRPEILYISIHRYDNGTFFPNSK
EADYTAVGEGRGEGFNVNIPWNKRGMGDVEYLAAFTQVVLPIAYEYNPELVIISAGFDAC
VGDPLGGCKVTPECFGRMTQFLSGLAGGRVVLCLEGGYNITSTAYAMAMCVKALLDDPIL
HHYDPKHVCHWSAVESINNVIRVQKKYWKSLKFQLALPIEDVIEKPLPSRGLIVKEDASS
PDVNYSKNQVDHSVSSVENIMSNLSIDNKCSDGIHCGTDDEEDESKSSESKANGNKTGES
TSNENKKPATLVDFLAENMQAIVDEEMFAVVPLQWCPHLESLYAIPADVKFEQGVKCVSC
EHTDENWVCLHCYITACGRHVGGHMQEHYRSAQHALALSLRDLSVWCSACDAYVDNALLY
DAKNNAHRCKFQEDMPWCYHTDTIHMQ |
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| NT seq |
3324 nt +upstreamnt +downstreamnt
atgtcggatcctccaagtgcgcagacgcgccgttcagctggggagttgaagaaaactcca
ccgtcttctgttgtgacgagaaatggtgcgaggaaagcaaaaattcagacacgtgctatg
tctgcaggtgttaaaccttcagcttcactgctagctgccaagaaaaaagctcaacaaaag
aagaagcaagctgttgacacaattttgcgggatccttatcaaattgcaatggagtcaaaa
ttaaaaatgaaaggcccaactggttttgttagcgagccacgcatggcagagcatagatgt
ctgtgggatgataaatatccggaatgccctgagcgactgataagtgtcatcaacaggtgc
aaagagttaaatctaatagaacaatgtaaagtattaacgccaagggcagctacaagagaa
gaaatagaaacattacactctccggcaattattgacatgctagaaagcacacatcaaaat
aatgatgtcgagtacttggaagatctgtcctcgaaatatgatgccatatatattcatcct
agcacacacgagctggccctgatagcggcgggctctacactggagctggtgtcgcgtgtg
gtatcgggtgagctgcagaacggagccgccttcgtgcgtccgcccggacaccacgccatg
cgcgccgagccctgcgggtactgcttctacaataacgtggcgctggccgcccggcacgcg
ctgcagctgggagtggagcggatactgatcatagattgggatgtgcatcacggtcaggca
acacagcaaatgttttatgacgatccaagggtggtatacttctcgatccatcgctacgag
cacggctcgttctggcccaacttgcggcaggccgacttccactacacgggcagcggcgcg
ggggaggggtacaacttcaacgtgccgctcaactgcaccgggatgaaggacgcggactac
ttggcgatatggcaccagctccttctgcccatggcgctcgagttctccccgcagctcgtc
ctcatctccgcggggtacgattctgcactaggcgatgaaaaaggcgagatggaggtgtcg
ccggcgtgctacgcgtggctgacgcagcaggtgtgcgcggtgtgcgcgcgcgtgtgcgtg
gtgctggagggcggctactgccccgcggcgctggccgagggcgcggcgctcacgctgcgc
gcgctgctcgcgctgcccgcgcccgtcgcccccgcgcccgccgcccccgcgccgcccgcc
gagccctgcgaccagataagggaatcgatcctgaactgtatctacgcccacaagaagcac
tggcggtgcttcaactaccagcccacatacagcacgggccccacgccaaacgtgtgcgac
gggcagaaggtgaagcacacggtgcgagtgcggtgggagggcgacgagacgaggcccgag
cgcttcgccacgagggactgctaccctctgcaggacgaccgcaccaagcgggagatacgg
gaacgactgaaccatttgcgattagttacggagctacctctaccggaacccgtgtgttac
gtctatgaccaggccatgttgaaacacaagaatatttgtgaaccaggtcacgtcgagtgc
ccggagcgaataatgcgtattcatgagaggcttcgcgactttggcctcttagagaggttg
caacgaatagaggccaggcgcgccactgacgaggagatcctcgctgttcacacgcgtaaa
catctagacaggttaaaagaattatcaagtactaagttaagagatctaaacagtcagaag
gacgcctacgattccgtatacttccatccggacacgttcgagagtgcaagcatagcttcc
ggttgcgtcttacaggtggtggagcgcgtggcgggcgggcgcggcgggcgcggcgcgtgc
gcggtgcggccgcccggccaccacgccgccgcggacgcgcccagcgggttctgcgtgctc
aacaacgcggccgtgggcgccgtgcacgccgtgcgcgcgctgggcctgcgccgcgtgctg
ctcgtggactgggacgtgcaccacgggaacggcacgcagagcctgctctacgaccggccc
gagatcttgtatatatcgatccaccggtacgacaacggcactttcttcccgaattccaaa
gaggcggactacacggctgtgggggagggccgcggggaggggttcaacgttaacattcct
tggaataagcgcggaatgggtgatgtagaatacttggcggctttcactcaagttgttttg
ccaatcgcatacgagtacaatccggagctagtgattatctcggctggcttcgatgcctgc
gtgggcgacccacttggaggttgtaaggtaacgccggagtgcttcgggcgaatgacccaa
ttcctgagcgggctggcgggcgggcgggtcgtactatgcctggagggcggctacaacatc
accagtacagcgtatgccatggccatgtgtgtgaaggctctcctcgacgaccccattcta
caccattacgaccccaaacatgtctgccattggtctgccgtagaatctataaacaatgtt
atcagagtacaaaagaaatattggaagagcctcaagttccaactcgccctaccgatagaa
gacgtgatcgaaaagccattgccatctagaggattaattgtaaaggaagatgcgtcctcg
cctgatgttaattattcaaagaatcaagtagatcacagtgtgtcgtccgttgaaaatatt
atgtcaaatttgagcatagataataaatgctctgatgggattcactgtggtaccgatgat
gaagaagatgagtctaagtctagcgaatcaaaagcaaatggaaataaaaccggggagagt
actagcaatgaaaacaagaagccagcgacattagtcgacttcttagctgagaatatgcaa
gcgattgttgatgaagaaatgtttgcagtggttcctttacagtggtgtccacatttagaa
tcactgtacgcgatacccgctgatgtgaagtttgaacagggagtgaaatgtgttagttgt
gagcacacagacgagaactgggtgtgcttgcattgttatattacagcatgcgggcgtcac
gtgggcggccacatgcaggagcactaccgctcggcgcagcacgcgctggcgctgtccctg
cgtgacctgtccgtgtggtgcagcgcctgcgacgcctacgtcgacaacgcgctactatac
gacgccaagaacaacgcgcaccgctgcaagttccaagaagacatgccgtggtgctaccac
accgataccattcatatgcaataa |
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