| Entry |
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| Symbol |
hdac6
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| Name |
(RefSeq) histone deacetylase 6 isoform X1
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| KO |
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| Organism |
hcq Hippocampus comes (tiger tail seahorse)
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| Brite |
KEGG Orthology (KO) [BR:hcq00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:hcq01009]
109510379 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:hcq03019]
109510379 (hdac6)
04131 Membrane trafficking [BR:hcq04131]
109510379 (hdac6)
03036 Chromosome and associated proteins [BR:hcq03036]
109510379 (hdac6)
Enzymes [BR:hcq01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
109510379 (hdac6)
Protein phosphatases and associated proteins [BR:hcq01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109510379 (hdac6)
Messenger RNA biogenesis [BR:hcq03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
109510379 (hdac6)
Membrane trafficking [BR:hcq04131]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109510379 (hdac6)
Chromosome and associated proteins [BR:hcq03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
109510379 (hdac6)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1086 aa
MSSGADDSPPLASSSSCGQKSVRRSPRLSPQGGVVQGNQRKKKSGSLQEAKKKGRMSRNR
EDRDEELQVELQRLDLSSRSSASGTGLVYSEIFTHHQNLWDPNHVESPARVTSIMEELDR
QGLLSRCVQVQPRAATDEDLLLVHTKHYIELIKSTQTMSETELHQFSDKYDSVYIHPETF
QVSILAVGSVLQLVDQVLTSKLRNGFAVIRPPGHHAQSNEANGFCVFNNVAIAARYAQNK
HKVKRVLIVDWDIHHGQGVQRVFQEDPSVLYVSVHRFERGAFWPHLPESDSTFVGGAPAE
GRNINLAWSAAGKSDADYMCAFQRLLLPVAYEFQPQLVLVSAGFDAALGDPKGQMCMSPE
CFQTLTHMLMSLAEGQLILALEGGYNLQATAKGAAACVRALLGGACAPMAPPTAPSDCAL
KSISESISALYPYWTSLQVLEGDHLAEGQVLGLATDEESPPCPAAMTTGLVYDERMMEHL
NLWDRHHPEQPQRIFKIFSRHQQLGLVERCQRIPSRFATEEELAMCHTADHIQQMKSTTT
MKNRDLHKLGQEFNSIYINNQSFKSALLAAGSCFNAVDHIMTGQVRSGVAIVRPPGHHAE
SGTACGFCFFNTAALAARYAQKTCRHAPVRVLILDWDVHHGNGTQHMFEDDNSVLYVSLH
RYDNGNFFPSSEDAAPNRVGVAKGTGFNVNVAWSGGRMGDAEYLAAFHHVVMPIAVEFNP
GLVLVSAGFDAARGDPLGGYRVTPECYAHLTHMLMSLACGRVLLILEGGYNLTSISDSMA
MCTSALLGDPPPSLATPLPPPHDAAVAAINEVIRHHAPYWKSLRINIPESLRAAIPSPSA
HRRRSGKGKGRRSRQSGPDQPPLPPAGLEGNTADHSLDQLTQGLASLDISPSAHPPDVEA
ESSEVTSERNRSRAKSSEVSPEQSRSAESSQPPVVIDPAPTDVDPGEEAEPGGACGWSKP
QGTLELTCGVQMAPMYVVDPLSWCPHLDAIKPLPPSGIDIFQHCQDCASEAENWICLTCY
KVACGRYVNEHMLMHGATADHPVVLSFCDLSVWCYACESYVHNQAVFEAKSAAHSAKFGE
EMPPWS |
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| NT seq |
3261 nt +upstreamnt +downstreamnt
atgtcgtctggagctgatgattctccaccattggcatcatcatcatcatgtggacaaaag
tcagttcggaggtctcctcgtctgtcccctcagggaggcgtagttcaaggtaatcagcgg
aagaagaaaagtggcagcttgcaggaggcaaagaagaaagggagaatgtcgaggaaccga
gaagaccgtgacgaggagcttcaggtggaactgcagcggctggacctgtccagcaggtca
tccgccagtggaacaggtttggtttattctgagatcttcacccatcatcagaacctgtgg
gaccccaatcatgtagaaagtccagccagagtgacatccatcatggaagagctggacaga
caagggctgctgtcacgctgcgttcaagtgcagcccagagcagccactgatgaagacctg
ttactcgtgcacacgaagcactacatcgagctgattaagtccactcagacgatgtctgaa
acagaactgcatcagttttctgacaaatatgattccgtttatatccatcccgagaccttc
caggtgtccatcttggcggtgggttcagtgctccagctagttgaccaggtgttgacatct
aaactgagaaacggctttgctgtcatcaggcctccaggacatcacgctcagtcaaacgag
gccaacggtttttgtgttttcaacaacgtggccattgcagctcgttacgctcagaacaaa
cacaaagtcaaaagggtgttgatcgtggactgggacattcatcacggtcaaggtgtccaa
cgtgtgttccaagaagaccccagcgtgctgtacgtgagcgtgcacaggtttgagcggggt
gccttctggcctcacctgccagagtctgacagcacatttgtgggcggcgcccccgccgaa
ggacgaaacatcaacctggcctggtccgcggccggaaaaagcgacgcagactacatgtgt
gctttccagcgactgctgctcccggtcgcctacgagtttcagccgcagctggttctggtg
tctgctggttttgatgccgcactgggggatcccaagggccagatgtgcatgagtcccgaa
tgtttccagacactgacacacatgctgatgtctttggcagaaggtcaactcattctggct
ctcgagggaggttacaacctgcaggcgacagcgaagggtgctgccgcttgtgttcgtgcc
ttgctggggggagcctgtgcaccaatggctccgcccactgctccgtctgactgtgccctg
aagtccatctctgagagcatctcagctttgtatccatattggacctcactgcaagtgctg
gagggcgaccatcttgctgaaggacaagtcctcggattagcaacggatgaggagagcccg
ccgtgtcccgctgccatgacaacgggcctggtgtacgacgagagaatgatggagcacctg
aacctgtgggacaggcatcatcctgaacagccgcaaagaatcttcaagatcttctcaagg
catcagcagctcggtctggtggaacgttgccagcgcattccgtctcgcttcgccaccgag
gaggagctcgccatgtgtcacacggcggaccacatccagcagatgaagtcgaccactacg
atgaagaacagggatttgcacaaactgggccaagagttcaactccatctacatcaacaat
cagagtttcaagtcagccctgctggccgccggaagctgcttcaatgctgtggaccacatt
atgactggacaggtgagaagcggcgtggctatcgtgcgtccccccggtcatcacgccgag
agtgggactgcgtgcggtttttgtttcttcaacacggcggcactcgccgctcgctacgcg
cagaagacttgccggcatgcgcccgtccgagtcttaatcctggactgggacgttcaccac
ggcaacggcacgcagcacatgtttgaagacgacaacagcgtcctctacgtctccctccat
cgctatgacaacgggaacttcttcccgtcctcggaggacgccgccccgaatcgggtggga
gtggccaaggggacgggcttcaacgtcaacgtggcgtggagcggcggcaggatgggtgac
gccgaatacctcgccgccttccaccacgtcgtcatgccgattgccgttgagttcaatcca
ggtctggtgttggtgtcggcgggattcgacgccgcgcggggcgaccctctgggcggatac
cgcgtgacccccgagtgctacgcacacctcacgcacatgctgatgtcgttggcttgtggc
cgagttttactcatattggagggcggttacaacttgacgtccatctccgactccatggcc
atgtgcacgagcgcgctgctgggtgatcctcctccttcgctggcgacgcccctcccccca
cctcacgacgccgccgtggcagccatcaatgaggtcatccggcaccacgccccctactgg
aagtcgttgcggataaacatccccgaatccctgcgagcagctataccttccccgagcgct
catcggaggcgcagtggaaaaggcaaaggcaggaggtcaagacagagtggtccagaccaa
ccacccctgccccctgctggactggagggcaacacagcagaccacagtttggaccaactc
acacaaggtttggccagcttggacatcagtccaagcgcgcacccgcccgacgtggaagcg
gagtcaagtgaagtgacgtctgagcggaaccggtccagggccaagtcgagtgaagtgtcc
cctgagcagagccgatcagcagaaagctcacagccaccagtcgtcatcgaccccgcacca
acagatgttgaccctggggaggaggcggagcctgggggagcgtgcggttggtccaagcct
caaggaactctggagctgacgtgtggcgtgcagatggcccccatgtatgtggtggaccct
ctgtcctggtgtcctcacctggacgccatcaagcccctgcccccatctggtatcgatatc
ttccagcactgtcaggactgtgcctcggaggcagagaactggatctgcctcacctgctac
aaggtggcgtgcggccgctacgtcaacgagcacatgttgatgcacggtgccacggccgat
catccggtggtgctgagtttctgcgacctctccgtgtggtgctatgcgtgcgagtcctac
gtgcacaaccaggccgtgtttgaagcgaagagcgccgcccacagcgccaagtttggagag
gagatgccgccctggagttag |
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