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KEGG   Zalophus californianus (California sea lion): 113934741
Entry
113934741         CDS       T07874                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
zca  Zalophus californianus (California sea lion)
Pathway
zca03320  PPAR signaling pathway
zca04148  Efferocytosis
zca04151  PI3K-Akt signaling pathway
zca04659  Th17 cell differentiation
zca04919  Thyroid hormone signaling pathway
zca04920  Adipocytokine signaling pathway
zca04928  Parathyroid hormone synthesis, secretion and action
zca04932  Non-alcoholic fatty liver disease
zca04976  Bile secretion
zca05160  Hepatitis C
zca05200  Pathways in cancer
zca05202  Transcriptional misregulation in cancer
zca05207  Chemical carcinogenesis - receptor activation
zca05216  Thyroid cancer
zca05222  Small cell lung cancer
zca05223  Non-small cell lung cancer
zca05226  Gastric cancer
zca05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:zca00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    113934741 (RXRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    113934741 (RXRA)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    113934741 (RXRA)
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    113934741 (RXRA)
   04928 Parathyroid hormone synthesis, secretion and action
    113934741 (RXRA)
  09154 Digestive system
   04976 Bile secretion
    113934741 (RXRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    113934741 (RXRA)
   05202 Transcriptional misregulation in cancer
    113934741 (RXRA)
   05207 Chemical carcinogenesis - receptor activation
    113934741 (RXRA)
  09162 Cancer: specific types
   05226 Gastric cancer
    113934741 (RXRA)
   05216 Thyroid cancer
    113934741 (RXRA)
   05222 Small cell lung cancer
    113934741 (RXRA)
   05223 Non-small cell lung cancer
    113934741 (RXRA)
  09172 Infectious disease: viral
   05160 Hepatitis C
    113934741 (RXRA)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    113934741 (RXRA)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    113934741 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zca03000]
    113934741 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:zca03310]
    113934741 (RXRA)
Transcription factors [BR:zca03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    113934741 (RXRA)
Nuclear receptors [BR:zca03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   113934741 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 113934741
NCBI-ProteinID: XP_027472069
UniProt: A0A6J2ET16
Position
13:complement(2712370..2810623)
AA seq 470 aa
MRIAHQCPVTPGDFSSQVNSSPLSSPTGRGSMAAPSLHPSLGPGIGSSLGSPGQLHSPIS
TLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTSSPQLSSPMNPVSSSEDIKPPLG
LNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCR
DNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPV
EKILEAELAVEPKTETYVDANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSEL
PLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTE
LVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQP
GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgaggattgcccatcagtgcccagtcacgcctggagacttctccagccaggtgaactcc
tcgcccctcagctcccccacggggcgtggctccatggccgccccctcactgcacccctct
ctggggcctggcatcggctcctcgctcggctcccctggacagctgcactcgcccatcagc
accctgagctcccccatcaatggcatgggcccacccttctcggtcatcagctcccccatg
ggcccccactccatgtccgtgcccaccacgccgaccctgggctttggcaccagcagcccc
cagctcagctcacccatgaaccccgtcagcagcagcgaggacatcaagcccccgctgggc
ctcaatggtgtcctcaaagtcccggctcacccgtcagggaacatggcgtccttcaccaag
cacatctgtgccatctgcggggaccgctcctcaggcaagcactacggggtgtacagctgc
gagggctgcaagggcttcttcaagcgcacggtgcgcaaggacctgacctacacctgccga
gacaacaaagactgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgctac
cagaagtgcctggccatgggcatgaagcgggaagccgtacaggaggagcggcagcggggc
aaggacaggaacgagaacgaggtggagtccacgagcagtgccaacgaggacatgccagtg
gagaagattctggaggcagagctggctgtcgagcccaagaccgagacgtacgtggacgcg
aacatggggctgaaccccaactcgcccaacgaccccgtcaccaacatctgccaggcagcg
gacaaacagctcttcacgctggtcgagtgggccaagcggatcccgcatttctctgagctg
cccctggacgaccaggtcatcctgctgagggcaggctggaacgagctgctcatcgcctcc
ttctcccaccggtccatcgccgtgaaggacgggattctcctggccaccgggctgcacgtc
caccggaacagtgcccacagcgcaggggtgggcgccatcttcgacagggtgttgacggag
ctcgtgtccaagatgcgggacatgcagatggacaagacggagctgggctgcctgcgtgcc
attgtcctcttcaaccctgactccaaggggctctcgaacccagcggaggtggaggcgctg
cgggagaaggtctacgcgtccctggaggcctactgcaaacacaagtaccccgagcagcca
ggaaggttcgccaagctgctgctccgcctgccggctctgcgctccatcggcctcaagtgc
ctggaacatctcttcttcttcaagctcatcggggacacgcccatcgacaccttcctcatg
gagatgctagaagccccccaccaaatgacttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (38)   

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