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KEGG   Zootoca vivipara (common lizard): 118083958
Entry
118083958         CDS       T07275                                 
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
zvi  Zootoca vivipara (common lizard)
Pathway
zvi03320  PPAR signaling pathway
zvi04148  Efferocytosis
zvi04920  Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    118083958 (RXRA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zvi03000]
    118083958 (RXRA)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:zvi03310]
    118083958 (RXRA)
Transcription factors [BR:zvi03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    118083958 (RXRA)
Nuclear receptors [BR:zvi03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   118083958 (RXRA)
SSDB
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 118083958
NCBI-ProteinID: XP_034969028
Position
LG4:77415707..77540653
AA seq 502 aa
MDTKHFLPLDMCVRACVSNGSFGVFDFSSPVNSTSLSSPNSRGPMTAPSLHPSMATGIGG
SLGSPGQLHSPISTLSSPINGMGPPFSVISSPMGAHPMSGPSTPGLGFGTSSPQLNSPMN
PVSSTEDIKPPLGINGVLKVPVHPSSAMASFTKHICAICGDRSSGKHYGVYSCEGCKGFF
KRTVRKDLTYTCRDNKDCLIDKRQRNRCQYCRYQKCLAMGMKREGMEHHPSRPTRLPGRQ
EEQAVQEERQRGKDRNENEVESTSNANEDMPVEKILEAELAVEPKTETYIEANMGLTPNS
PNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAV
KDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDS
KGLSNPAEVEALREKVYASLEAYCKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFK
LIGDTPIDTFLMEMLEAPHQMT
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggacaccaagcattttcttccattggacatgtgtgtgcgtgcgtgtgtatccaatggc
agctttggcgtttttgatttctccagcccagtcaattccacctccttaagctctccgaac
agcagagggcctatgactgcaccgtctctccatccatcgatggccactggcattggtggc
tctttggggtcccctggccagctccactcacccatcagcaccctcagctcaccaatcaac
ggcatggggccaccgttctcagtcatcagctccccaatgggggctcaccccatgtctgga
ccctccacccctggccttggatttggaaccagcagccctcagctcaattctccaatgaat
cctgttagcagcacagaagatatcaagcccccgttggggatcaacggggtcctcaaagtt
ccagtgcacccatcatccgccatggcctccttcaccaagcacatatgtgccatttgtgga
gacagatcttcaggtaaacattatggggtgtacagttgtgagggctgcaaaggcttcttc
aagaggacggtgaggaaggacctgacgtacacctgccgggacaataaggactgcttaatc
gacaagcggcagcggaaccggtgtcagtactgccggtaccaaaagtgtcttgcgatgggc
atgaagcgggaagggatggagcaccatccatcccggcccacaagactccctggaaggcag
gaagaacaagctgtccaagaggagaggcagcgtgggaaggaccgtaatgagaatgaggtt
gaatctacgagcaacgctaatgaggacatgcccgtggagaaaattctagaagccgaactt
gccgttgagccaaagacagagacatacattgaggcgaacatgggcttgacccccaattcg
cccaatgacccggtcaccaacatctgccaagcggcagacaagcaactttttacattggtg
gaatgggccaaaaggatcccacacttctcagaactgccgctagacgaccaagtgatcttg
ctcagggctggttggaatgagttgctcattgcctccttctcacaccggtccatagctgtg
aaagatgggatcctccttgccacaggtctccacgtccatcggaacagtgctcacagtgca
ggcgttggtgccatctttgacagagtattgacagaactcgtatcaaaaatgagagatatg
cagatggataaaacagaactggggtgtctccgagccattgtcctcttcaaccctgactca
aaagggctttccaatcctgctgaagttgaggctctgcgcgagaaagtgtatgcgtcactt
gaggcctactgtaaacagaaataccctgaccagcccgggaggttcgccaagcttttgctc
cgcctccctgccctgcggtccattggcctcaaatgcctggagcacctcttcttcttcaag
ctaataggggacacgcccatcgacaccttcctgatggagatgctcgaggctccccaccaa
atgacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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